RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 MAD2L2Q9UI95 211 aa15.32■□□□□ 0.04
RPS28-204ENST00000602140 DDX41Q9UJV9 622 aaKnown RBP15.32■□□□□ 0.04
RPS28-204ENST00000602140 SCN5AQ14524 2016 aa15.31■□□□□ 0.04
RPS28-204ENST00000602140 OPLAHO14841 1288 aa15.31■□□□□ 0.04
RPS28-204ENST00000602140 PPP1R11O60927 126 aaPredicted RBP15.31■□□□□ 0.04
RPS28-204ENST00000602140 EIF3JO75822 258 aaKnown RBP15.31■□□□□ 0.04
RPS28-204ENST00000602140 CASTP20810 708 aaKnown RBP15.31■□□□□ 0.04
RPS28-204ENST00000602140 HSD17B4P51659 736 aa15.31■□□□□ 0.04
RPS28-204ENST00000602140 TRDNQ13061 729 aa15.31■□□□□ 0.04
RPS28-204ENST00000602140 GDF6Q6KF10 455 aaPredicted RBP15.31■□□□□ 0.04
RPS28-204ENST00000602140 KAT2BQ92831 832 aa15.31■□□□□ 0.04
RPS28-204ENST00000602140 MTMR8Q96EF0 704 aa15.31■□□□□ 0.04
RPS28-204ENST00000602140 MRVI1Q9Y6F6 885 aa15.31■□□□□ 0.04
RPS28-204ENST00000602140 PALM3A6NDB9 673 aaPredicted RBP15.3■□□□□ 0.04
RPS28-204ENST00000602140 ZBTB5O15062 677 aa15.3■□□□□ 0.04
RPS28-204ENST00000602140 DGKDQ16760 1214 aa15.3■□□□□ 0.04
RPS28-204ENST00000602140 TMEM67Q5HYA8 995 aa15.3■□□□□ 0.04
RPS28-204ENST00000602140 SESTD1Q86VW0 696 aa15.3■□□□□ 0.04
RPS28-204ENST00000602140 SUPT16HQ9Y5B9 1047 aaKnown RBP15.3■□□□□ 0.04
RPS28-204ENST00000602140 PCDHA1Q9Y5I3 950 aa15.3■□□□□ 0.04
RPS28-204ENST00000602140 MYH6P13533 1939 aa15.29■□□□□ 0.04
RPS28-204ENST00000602140 IFIT3O14879 490 aaKnown RBP15.29■□□□□ 0.04
RPS28-204ENST00000602140 CA3P07451 260 aa15.29■□□□□ 0.04
RPS28-204ENST00000602140 CYP21A2P08686 494 aa15.29■□□□□ 0.04
RPS28-204ENST00000602140 MYCLP12524 364 aaPredicted RBP15.29■□□□□ 0.04
RPS28-204ENST00000602140 HOXA13P31271 388 aaPredicted RBP15.29■□□□□ 0.04
RPS28-204ENST00000602140 GHRHRQ02643 423 aa15.29■□□□□ 0.04
RPS28-204ENST00000602140 PTH1RQ03431 593 aa15.29■□□□□ 0.04
RPS28-204ENST00000602140 LAMC2Q13753 1193 aa15.29■□□□□ 0.04
RPS28-204ENST00000602140 STOX1Q6ZVD7 989 aa15.29■□□□□ 0.04
RPS28-204ENST00000602140 HOMER1Q86YM7 354 aa15.29■□□□□ 0.04
RPS28-204ENST00000602140 DHX37Q8IY37 1157 aaKnown RBP15.29■□□□□ 0.04
RPS28-204ENST00000602140 CCDC155Q8N6L0 562 aa15.29■□□□□ 0.04
RPS28-204ENST00000602140 CAGE1Q8TC20 777 aa15.29■□□□□ 0.04
RPS28-204ENST00000602140 RUFY2Q8WXA3 655 aa15.29■□□□□ 0.04
RPS28-204ENST00000602140 EMID1Q96A84 441 aaPredicted RBP15.29■□□□□ 0.04
RPS28-204ENST00000602140 CTAGE1Q96RT6 745 aa15.29■□□□□ 0.04
RPS28-204ENST00000602140 SLC9A7Q96T83 725 aa15.29■□□□□ 0.04
RPS28-204ENST00000602140 PDCD2LQ9BRP1 358 aa15.29■□□□□ 0.04
RPS28-204ENST00000602140 MAP3K20Q9NYL2 800 aaKnown RBP15.29■□□□□ 0.04
RPS28-204ENST00000602140 THEGQ9P2T0 379 aa15.29■□□□□ 0.04
RPS28-204ENST00000602140 U3KPZ7 1027 aaPredicted RBP15.29■□□□□ 0.04
RPS28-204ENST00000602140 KIAA1217Q5T5P2 1943 aa15.29■□□□□ 0.04
RPS28-204ENST00000602140 TANC1Q9C0D5 1861 aa15.29■□□□□ 0.04
RPS28-204ENST00000602140 CHMLP26374 656 aa15.28■□□□□ 0.04
RPS28-204ENST00000602140 PSEN2P49810 448 aa15.28■□□□□ 0.04
RPS28-204ENST00000602140 GRM4Q14833 912 aa15.28■□□□□ 0.04
RPS28-204ENST00000602140 SLC35G1Q2M3R5 365 aa15.28■□□□□ 0.04
RPS28-204ENST00000602140 C7orf31Q8N865 590 aa15.28■□□□□ 0.04
RPS28-204ENST00000602140 PPTC7Q8NI37 304 aa15.28■□□□□ 0.04
RPS28-204ENST00000602140 PHOSPHO2Q8TCD6 241 aa15.28■□□□□ 0.04
RPS28-204ENST00000602140 AFAP1L1Q8TED9 768 aa15.28■□□□□ 0.04
RPS28-204ENST00000602140 ATXN2LQ8WWM7 1075 aaKnown RBP15.28■□□□□ 0.04
RPS28-204ENST00000602140 PIGSQ96S52 555 aa15.28■□□□□ 0.04
RPS28-204ENST00000602140 ALG1Q9BT22 464 aa15.28■□□□□ 0.04
RPS28-204ENST00000602140 KATNAL1Q9BW62 490 aa15.28■□□□□ 0.04
RPS28-204ENST00000602140 RIOX1Q9H6W3 641 aa15.28■□□□□ 0.04
RPS28-204ENST00000602140 SENP2Q9HC62 589 aa15.28■□□□□ 0.04
RPS28-204ENST00000602140 HDAC6Q9UBN7 1215 aa15.28■□□□□ 0.04
RPS28-204ENST00000602140 GTF2IRD1Q9UHL9 959 aa15.28■□□□□ 0.04
RPS28-204ENST00000602140 MYO9BQ13459 2157 aa15.27■□□□□ 0.04
RPS28-204ENST00000602140 ERICH2A1L162 156 aa15.27■□□□□ 0.04
RPS28-204ENST00000602140 SORBS3O60504 671 aa15.27■□□□□ 0.04
RPS28-204ENST00000602140 RGS20O76081 388 aa15.27■□□□□ 0.04
RPS28-204ENST00000602140 F2P00734 622 aa15.27■□□□□ 0.04
RPS28-204ENST00000602140 ZNF286BP0CG31 522 aa15.27■□□□□ 0.04
RPS28-204ENST00000602140 MFSD10Q14728 455 aa15.27■□□□□ 0.04
RPS28-204ENST00000602140 PGM5Q15124 567 aa15.27■□□□□ 0.04
RPS28-204ENST00000602140 RALYLQ86SE5 291 aaKnown RBP15.27■□□□□ 0.04
RPS28-204ENST00000602140 VSIG10LQ86VR7 867 aa15.27■□□□□ 0.04
RPS28-204ENST00000602140 MICALL1Q8N3F8 863 aa15.27■□□□□ 0.04
RPS28-204ENST00000602140 SAMD3Q8N6K7 520 aa15.27■□□□□ 0.04
RPS28-204ENST00000602140 DHX38Q92620 1227 aaKnown RBP15.27■□□□□ 0.04
RPS28-204ENST00000602140 CERS4Q9HA82 394 aa15.27■□□□□ 0.04
RPS28-204ENST00000602140 TAF6LQ9Y6J9 622 aa15.27■□□□□ 0.04
RPS28-204ENST00000602140 KIF28PB7ZC32 967 aa15.26■□□□□ 0.03
RPS28-204ENST00000602140 E7EWF7 191 aa15.26■□□□□ 0.03
RPS28-204ENST00000602140 GCOM1H8Y6P7 765 aaPredicted RBP15.26■□□□□ 0.03
RPS28-204ENST00000602140 RFXAPO00287 272 aa15.26■□□□□ 0.03
RPS28-204ENST00000602140 CYTH3O43739 400 aa15.26■□□□□ 0.03
RPS28-204ENST00000602140 BAIAP3O94812 1187 aa15.26■□□□□ 0.03
RPS28-204ENST00000602140 POLR2MP0CAP2 368 aa15.26■□□□□ 0.03
RPS28-204ENST00000602140 CKBP12277 381 aa15.26■□□□□ 0.03
RPS28-204ENST00000602140 SELPP16109 830 aa15.26■□□□□ 0.03
RPS28-204ENST00000602140 TRAF1Q13077 416 aa15.26■□□□□ 0.03
RPS28-204ENST00000602140 GPNMBQ14956 572 aa15.26■□□□□ 0.03
RPS28-204ENST00000602140 WTAPQ15007 396 aa15.26■□□□□ 0.03
RPS28-204ENST00000602140 KIAA0753Q2KHM9 967 aa15.26■□□□□ 0.03
RPS28-204ENST00000602140 MYSM1Q5VVJ2 828 aa15.26■□□□□ 0.03
RPS28-204ENST00000602140 KCNV1Q6PIU1 500 aa15.26■□□□□ 0.03
RPS28-204ENST00000602140 LRRC8DQ7L1W4 858 aa15.26■□□□□ 0.03
RPS28-204ENST00000602140 FCHSD1Q86WN1 690 aa15.26■□□□□ 0.03
RPS28-204ENST00000602140 HERC6Q8IVU3 1022 aa15.26■□□□□ 0.03
RPS28-204ENST00000602140 NCOA7Q8NI08 942 aa15.26■□□□□ 0.03
RPS28-204ENST00000602140 IL31RAQ8NI17 732 aa15.26■□□□□ 0.03
RPS28-204ENST00000602140 ZFP91Q96JP5 570 aaPredicted RBP15.26■□□□□ 0.03
RPS28-204ENST00000602140 ASB2Q96Q27 587 aa15.26■□□□□ 0.03
RPS28-204ENST00000602140 REV3LO60673 3130 aa15.26■□□□□ 0.03
RPS28-204ENST00000602140 MUC3AQ02505 3323 aa15.25■□□□□ 0.03
RPS28-204ENST00000602140 PNMA6FA0A0J9YX94 578 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms