RNA–Protein interactions for RNA: ENST00000600879.5

HIF3A-219, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-219ENST00000600879 CKBP12277 381 aa11.73□□□□□ -0.53
HIF3A-219ENST00000600879 ZNF200P98182 395 aaPredicted RBP11.73□□□□□ -0.53
HIF3A-219ENST00000600879 LY6KQ17RY6 165 aa11.73□□□□□ -0.53
HIF3A-219ENST00000600879 SEPT14Q6ZU15 432 aa11.73□□□□□ -0.53
HIF3A-219ENST00000600879 DCAF4Q8WV16 495 aa11.73□□□□□ -0.53
HIF3A-219ENST00000600879 MRPL38Q96DV4 380 aaKnown RBP11.73□□□□□ -0.53
HIF3A-219ENST00000600879 TOMM22Q9NS69 142 aa11.73□□□□□ -0.53
HIF3A-219ENST00000600879 CLDND1Q9NY35 253 aa11.73□□□□□ -0.53
HIF3A-219ENST00000600879 HDAC6Q9UBN7 1215 aa11.73□□□□□ -0.53
HIF3A-219ENST00000600879 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.73□□□□□ -0.53
HIF3A-219ENST00000600879 ABHD14A-ACY1A0A1B0GW23 586 aa11.72□□□□□ -0.53
HIF3A-219ENST00000600879 CXCL10P02778 98 aa11.72□□□□□ -0.53
HIF3A-219ENST00000600879 EDNRBP24530 442 aa11.72□□□□□ -0.53
HIF3A-219ENST00000600879 DLX2Q07687 328 aaPredicted RBP11.72□□□□□ -0.53
HIF3A-219ENST00000600879 IKBKEQ14164 716 aa11.72□□□□□ -0.53
HIF3A-219ENST00000600879 USH1GQ495M9 461 aa11.72□□□□□ -0.53
HIF3A-219ENST00000600879 EPC2Q52LR7 807 aa11.72□□□□□ -0.53
HIF3A-219ENST00000600879 PPP4R3BQ5MIZ7 849 aa11.72□□□□□ -0.53
HIF3A-219ENST00000600879 ZNF618Q5T7W0 954 aa11.72□□□□□ -0.53
HIF3A-219ENST00000600879 MYOCDQ8IZQ8 938 aa11.72□□□□□ -0.53
HIF3A-219ENST00000600879 BANK1Q8NDB2 785 aa11.72□□□□□ -0.53
HIF3A-219ENST00000600879 KAT2BQ92831 832 aa11.72□□□□□ -0.53
HIF3A-219ENST00000600879 GPATCH3Q96I76 525 aa11.72□□□□□ -0.53
HIF3A-219ENST00000600879 MPHOSPH6Q99547 160 aaKnown RBP11.72□□□□□ -0.53
HIF3A-219ENST00000600879 OSBPL7Q9BZF2 842 aa11.72□□□□□ -0.53
HIF3A-219ENST00000600879 TRIP12Q14669 1992 aaPredicted RBP11.72□□□□□ -0.53
HIF3A-219ENST00000600879 LOC102724159A0A0B4J2E5 919 aa11.71□□□□□ -0.53
HIF3A-219ENST00000600879 C19orf67A6NJJ6 358 aa11.71□□□□□ -0.53
HIF3A-219ENST00000600879 FOXP2O15409 715 aa11.71□□□□□ -0.53
HIF3A-219ENST00000600879 UPP2O95045 317 aa11.71□□□□□ -0.53
HIF3A-219ENST00000600879 ZNF286BP0CG31 522 aa11.71□□□□□ -0.53
HIF3A-219ENST00000600879 GTF2F1P35269 517 aaKnown RBP eCLIP11.71□□□□□ -0.53
HIF3A-219ENST00000600879 ARHGAP1Q07960 439 aa11.71□□□□□ -0.53
HIF3A-219ENST00000600879 GPM6BQ13491 265 aa11.71□□□□□ -0.53
HIF3A-219ENST00000600879 HIC1Q14526 733 aa11.71□□□□□ -0.53
HIF3A-219ENST00000600879 PWP2Q15269 919 aaKnown RBP11.71□□□□□ -0.53
HIF3A-219ENST00000600879 RRP12Q5JTH9 1297 aaKnown RBP11.71□□□□□ -0.53
HIF3A-219ENST00000600879 C20orf194Q5TEA3 1177 aa11.71□□□□□ -0.53
HIF3A-219ENST00000600879 TRAF7Q6Q0C0 670 aa11.71□□□□□ -0.53
HIF3A-219ENST00000600879 BTNL9Q6UXG8 535 aa11.71□□□□□ -0.53
HIF3A-219ENST00000600879 ADHFE1Q8IWW8 467 aa11.71□□□□□ -0.53
HIF3A-219ENST00000600879 C7orf31Q8N865 590 aa11.71□□□□□ -0.53
HIF3A-219ENST00000600879 TMEM47Q9BQJ4 181 aa11.71□□□□□ -0.53
HIF3A-219ENST00000600879 FSD1Q9BTV5 496 aa11.71□□□□□ -0.53
HIF3A-219ENST00000600879 CPVLQ9H3G5 476 aa11.71□□□□□ -0.53
HIF3A-219ENST00000600879 GTF2IRD1Q9UHL9 959 aa11.71□□□□□ -0.53
HIF3A-219ENST00000600879 C5orf42Q9H799 3197 aa11.71□□□□□ -0.53
HIF3A-219ENST00000600879 SIP14410 1827 aa11.71□□□□□ -0.54
HIF3A-219ENST00000600879 USP34Q70CQ2 3546 aa11.7□□□□□ -0.54
HIF3A-219ENST00000600879 GH1P01241 217 aa11.7□□□□□ -0.54
HIF3A-219ENST00000600879 LTBRP36941 435 aa11.7□□□□□ -0.54
HIF3A-219ENST00000600879 PSEN2P49810 448 aa11.7□□□□□ -0.54
HIF3A-219ENST00000600879 TRIM71Q2Q1W2 868 aaKnown RBP11.7□□□□□ -0.54
HIF3A-219ENST00000600879 PUS10Q3MIT2 529 aaKnown RBP11.7□□□□□ -0.54
HIF3A-219ENST00000600879 CCDC62Q6P9F0 684 aa11.7□□□□□ -0.54
HIF3A-219ENST00000600879 RPAINQ86UA6 219 aa11.7□□□□□ -0.54
HIF3A-219ENST00000600879 SESTD1Q86VW0 696 aa11.7□□□□□ -0.54
HIF3A-219ENST00000600879 RNF135Q8IUD6 432 aa11.7□□□□□ -0.54
HIF3A-219ENST00000600879 DBF4BQ8NFT6 615 aa11.7□□□□□ -0.54
HIF3A-219ENST00000600879 TBC1D5Q92609 795 aa11.7□□□□□ -0.54
HIF3A-219ENST00000600879 PABPC5Q96DU9 382 aaKnown RBP11.7□□□□□ -0.54
HIF3A-219ENST00000600879 MFSD14AQ96MC6 490 aa11.7□□□□□ -0.54
HIF3A-219ENST00000600879 INSL6Q9Y581 213 aa11.7□□□□□ -0.54
HIF3A-219ENST00000600879 LINC01565O15544 149 aa11.69□□□□□ -0.54
HIF3A-219ENST00000600879 LGR5O75473 907 aa11.69□□□□□ -0.54
HIF3A-219ENST00000600879 AMHP03971 560 aa11.69□□□□□ -0.54
HIF3A-219ENST00000600879 GOLGA8HP0CJ92 632 aa11.69□□□□□ -0.54
HIF3A-219ENST00000600879 CASTP20810 708 aaKnown RBP11.69□□□□□ -0.54
HIF3A-219ENST00000600879 MFSD10Q14728 455 aa11.69□□□□□ -0.54
HIF3A-219ENST00000600879 PTPROQ16827 1216 aa11.69□□□□□ -0.54
HIF3A-219ENST00000600879 KIAA0753Q2KHM9 967 aa11.69□□□□□ -0.54
HIF3A-219ENST00000600879 ZMYM1Q5SVZ6 1142 aa11.69□□□□□ -0.54
HIF3A-219ENST00000600879 VPS53Q5VIR6 699 aa11.69□□□□□ -0.54
HIF3A-219ENST00000600879 DNERQ8NFT8 737 aa11.69□□□□□ -0.54
HIF3A-219ENST00000600879 TAAR1Q96RJ0 339 aa11.69□□□□□ -0.54
HIF3A-219ENST00000600879 IGFLR1Q9H665 355 aa11.69□□□□□ -0.54
HIF3A-219ENST00000600879 TRIOO75962 3097 aa11.69□□□□□ -0.54
HIF3A-219ENST00000600879 B4DLN1 442 aa11.68□□□□□ -0.54
HIF3A-219ENST00000600879 GFRA3O60609 400 aa11.68□□□□□ -0.54
HIF3A-219ENST00000600879 EFCAB14O75071 495 aa11.68□□□□□ -0.54
HIF3A-219ENST00000600879 PARNO95453 639 aaKnown RBP11.68□□□□□ -0.54
HIF3A-219ENST00000600879 PDHBP11177 359 aa11.68□□□□□ -0.54
HIF3A-219ENST00000600879 TOP1P11387 765 aaKnown RBP11.68□□□□□ -0.54
HIF3A-219ENST00000600879 THPOP40225 353 aa11.68□□□□□ -0.54
HIF3A-219ENST00000600879 NOVP48745 357 aa11.68□□□□□ -0.54
HIF3A-219ENST00000600879 MRPL12P52815 198 aaKnown RBP11.68□□□□□ -0.54
HIF3A-219ENST00000600879 IRX6P78412 446 aaPredicted RBP11.68□□□□□ -0.54
HIF3A-219ENST00000600879 RBL2Q08999 1139 aa11.68□□□□□ -0.54
HIF3A-219ENST00000600879 TCF15Q12870 199 aa11.68□□□□□ -0.54
HIF3A-219ENST00000600879 PTK7Q13308 1070 aa11.68□□□□□ -0.54
HIF3A-219ENST00000600879 DGKDQ16760 1214 aa11.68□□□□□ -0.54
HIF3A-219ENST00000600879 TIGD5Q53EQ6 642 aa11.68□□□□□ -0.54
HIF3A-219ENST00000600879 DHX37Q8IY37 1157 aaKnown RBP11.68□□□□□ -0.54
HIF3A-219ENST00000600879 TMEM192Q8IY95 271 aa11.68□□□□□ -0.54
HIF3A-219ENST00000600879 OTUD7AQ8TE49 926 aaPredicted RBP11.68□□□□□ -0.54
HIF3A-219ENST00000600879 YME1L1Q96TA2 773 aa11.68□□□□□ -0.54
HIF3A-219ENST00000600879 UBA5Q9GZZ9 404 aa11.68□□□□□ -0.54
HIF3A-219ENST00000600879 KCNH6Q9H252 994 aa11.68□□□□□ -0.54
HIF3A-219ENST00000600879 NSUN3Q9H649 340 aaKnown RBP11.68□□□□□ -0.54
HIF3A-219ENST00000600879 COL20A1Q9P218 1284 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms