RNA–Protein interactions for RNA: ENST00000600868.5

UPF1-211, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-211ENST00000600868 OLFML2BQ68BL8 750 aa16.32■□□□□ 0.2
UPF1-211ENST00000600868 MBOAT7Q96N66 472 aa16.32■□□□□ 0.2
UPF1-211ENST00000600868 GABRQQ9UN88 632 aa16.32■□□□□ 0.2
UPF1-211ENST00000600868 MYH15Q9Y2K3 1946 aa16.32■□□□□ 0.2
UPF1-211ENST00000600868 PCNTO95613 3336 aa16.31■□□□□ 0.2
UPF1-211ENST00000600868 SYNGAP1Q96PV0 1343 aa16.31■□□□□ 0.2
UPF1-211ENST00000600868 EIF3JO75822 258 aaKnown RBP16.31■□□□□ 0.2
UPF1-211ENST00000600868 IGHA2P01877 340 aa16.31■□□□□ 0.2
UPF1-211ENST00000600868 MYCLP12524 364 aaPredicted RBP16.31■□□□□ 0.2
UPF1-211ENST00000600868 ATP2B1P20020 1258 aa16.31■□□□□ 0.2
UPF1-211ENST00000600868 ZNF76P36508 570 aa16.31■□□□□ 0.2
UPF1-211ENST00000600868 PDE4DQ08499 809 aa16.31■□□□□ 0.2
UPF1-211ENST00000600868 IRF5Q13568 498 aa16.31■□□□□ 0.2
UPF1-211ENST00000600868 NIPA1Q7RTP0 329 aa16.31■□□□□ 0.2
UPF1-211ENST00000600868 TRMT44Q8IYL2 757 aaKnown RBP16.31■□□□□ 0.2
UPF1-211ENST00000600868 TNPO1Q92973 898 aaKnown RBP16.31■□□□□ 0.2
UPF1-211ENST00000600868 MXRA8Q9BRK3 442 aa16.31■□□□□ 0.2
UPF1-211ENST00000600868 TINF2Q9BSI4 451 aa16.31■□□□□ 0.2
UPF1-211ENST00000600868 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.31■□□□□ 0.2
UPF1-211ENST00000600868 PCDHB6Q9Y5E3 794 aa16.31■□□□□ 0.2
UPF1-211ENST00000600868 UBIAD1Q9Y5Z9 338 aa16.31■□□□□ 0.2
UPF1-211ENST00000600868 CASP8AP2Q9UKL3 1982 aa16.31■□□□□ 0.2
UPF1-211ENST00000600868 FAM86B1E9PN63 330 aa16.3■□□□□ 0.2
UPF1-211ENST00000600868 MEIS1O00470 390 aa16.3■□□□□ 0.2
UPF1-211ENST00000600868 FOXN1O15353 648 aa16.3■□□□□ 0.2
UPF1-211ENST00000600868 TDP2O95551 362 aa16.3■□□□□ 0.2
UPF1-211ENST00000600868 FAM86B2P0C5J1 330 aa16.3■□□□□ 0.2
UPF1-211ENST00000600868 HSPA8P11142 646 aaKnown RBP16.3■□□□□ 0.2
UPF1-211ENST00000600868 DNM1Q05193 864 aaKnown RBP16.3■□□□□ 0.2
UPF1-211ENST00000600868 FOXD4L6Q3SYB3 417 aaPredicted RBP16.3■□□□□ 0.2
UPF1-211ENST00000600868 Q4G0T1 1027 aa16.3■□□□□ 0.2
UPF1-211ENST00000600868 ANO1Q5XXA6 986 aa16.3■□□□□ 0.2
UPF1-211ENST00000600868 FOXD4L3Q6VB84 417 aaPredicted RBP16.3■□□□□ 0.2
UPF1-211ENST00000600868 ARMCX2Q7L311 632 aa16.3■□□□□ 0.2
UPF1-211ENST00000600868 INPP4AQ96PE3 977 aaPredicted RBP16.3■□□□□ 0.2
UPF1-211ENST00000600868 USP28Q96RU2 1077 aa16.3■□□□□ 0.2
UPF1-211ENST00000600868 JADE2Q9NQC1 790 aa16.3■□□□□ 0.2
UPF1-211ENST00000600868 POLR3EQ9NVU0 708 aa16.3■□□□□ 0.2
UPF1-211ENST00000600868 RTEL1Q9NZ71 1219 aa16.3■□□□□ 0.2
UPF1-211ENST00000600868 CFAP45Q9UL16 551 aa16.3■□□□□ 0.2
UPF1-211ENST00000600868 LRRC37A2A6NM11 1700 aa16.3■□□□□ 0.2
UPF1-211ENST00000600868 IGLV3-22A0A075B6J6 115 aa16.29■□□□□ 0.2
UPF1-211ENST00000600868 BMP15O95972 392 aa16.29■□□□□ 0.2
UPF1-211ENST00000600868 HSPA1AP0DMV8 641 aaKnown RBP16.29■□□□□ 0.2
UPF1-211ENST00000600868 HSPA1BP0DMV9 641 aaKnown RBP16.29■□□□□ 0.2
UPF1-211ENST00000600868 ITGB5P18084 799 aa16.29■□□□□ 0.2
UPF1-211ENST00000600868 MCM7P33993 719 aa16.29■□□□□ 0.2
UPF1-211ENST00000600868 NASPP49321 788 aaPredicted RBP16.29■□□□□ 0.2
UPF1-211ENST00000600868 CTCFP49711 727 aaPredicted RBP16.29■□□□□ 0.2
UPF1-211ENST00000600868 KRT85P78386 507 aa16.29■□□□□ 0.2
UPF1-211ENST00000600868 SETQ01105 290 aaPredicted RBP16.29■□□□□ 0.2
UPF1-211ENST00000600868 NBR1Q14596 966 aa16.29■□□□□ 0.2
UPF1-211ENST00000600868 ZNF174Q15697 407 aa16.29■□□□□ 0.2
UPF1-211ENST00000600868 OTOP1Q7RTM1 612 aa16.29■□□□□ 0.2
UPF1-211ENST00000600868 CYP2W1Q8TAV3 490 aa16.29■□□□□ 0.2
UPF1-211ENST00000600868 LENG9Q96B70 501 aa16.29■□□□□ 0.2
UPF1-211ENST00000600868 FLRT1Q9NZU1 646 aa16.29■□□□□ 0.2
UPF1-211ENST00000600868 DDX25Q9UHL0 483 aaKnown RBP16.29■□□□□ 0.2
UPF1-211ENST00000600868 CEP131Q9UPN4 1083 aa16.29■□□□□ 0.2
UPF1-211ENST00000600868 CLIC4Q9Y696 253 aa16.29■□□□□ 0.2
UPF1-211ENST00000600868 DDX49Q9Y6V7 483 aaKnown RBP16.29■□□□□ 0.2
UPF1-211ENST00000600868 MAFGO15525 162 aa16.28■□□□□ 0.2
UPF1-211ENST00000600868 SLC37A4O43826 429 aa16.28■□□□□ 0.2
UPF1-211ENST00000600868 NEMFO60524 1076 aa16.28■□□□□ 0.2
UPF1-211ENST00000600868 SNAI1O95863 264 aaPredicted RBP16.28■□□□□ 0.2
UPF1-211ENST00000600868 SF3A1Q15459 793 aaKnown RBP16.28■□□□□ 0.2
UPF1-211ENST00000600868 CCL14Q16627 93 aa16.28■□□□□ 0.2
UPF1-211ENST00000600868 GNPTABQ3T906 1256 aa16.28■□□□□ 0.2
UPF1-211ENST00000600868 PRR16Q569H4 304 aa16.28■□□□□ 0.2
UPF1-211ENST00000600868 CLEC17AQ6ZS10 378 aa16.28■□□□□ 0.2
UPF1-211ENST00000600868 NLRX1Q86UT6 975 aa16.28■□□□□ 0.2
UPF1-211ENST00000600868 PLA2G4DQ86XP0 818 aa16.28■□□□□ 0.2
UPF1-211ENST00000600868 C4orf32Q8N8J7 132 aa16.28■□□□□ 0.2
UPF1-211ENST00000600868 GPRASP2Q96D09 838 aa16.28■□□□□ 0.2
UPF1-211ENST00000600868 ZFP91Q96JP5 570 aaPredicted RBP16.28■□□□□ 0.2
UPF1-211ENST00000600868 VTA1Q9NP79 307 aa16.28■□□□□ 0.2
UPF1-211ENST00000600868 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.28■□□□□ 0.2
UPF1-211ENST00000600868 TFIP11Q9UBB9 837 aaKnown RBP16.28■□□□□ 0.2
UPF1-211ENST00000600868 MORC2Q9Y6X9 1032 aaPredicted RBP16.28■□□□□ 0.2
UPF1-211ENST00000600868 LAD1O00515 517 aa16.27■□□□□ 0.2
UPF1-211ENST00000600868 TBX3O15119 743 aa16.27■□□□□ 0.2
UPF1-211ENST00000600868 RGS20O76081 388 aa16.27■□□□□ 0.2
UPF1-211ENST00000600868 YEATS4O95619 227 aa16.27■□□□□ 0.2
UPF1-211ENST00000600868 ICAM3P32942 547 aa16.27■□□□□ 0.2
UPF1-211ENST00000600868 MTMR1Q13613 665 aa16.27■□□□□ 0.2
UPF1-211ENST00000600868 PTPAQ15257 358 aa16.27■□□□□ 0.2
UPF1-211ENST00000600868 PXYLP1Q8TE99 480 aa16.27■□□□□ 0.2
UPF1-211ENST00000600868 CDHR1Q96JP9 859 aa16.27■□□□□ 0.2
UPF1-211ENST00000600868 WDR11Q9BZH6 1224 aa16.27■□□□□ 0.2
UPF1-211ENST00000600868 FTOQ9C0B1 505 aaKnown RBP eCLIP16.27■□□□□ 0.2
UPF1-211ENST00000600868 KATNBL1Q9H079 304 aa16.27■□□□□ 0.2
UPF1-211ENST00000600868 ABHD16BQ9H3Z7 469 aa16.27■□□□□ 0.2
UPF1-211ENST00000600868 NRBP1Q9UHY1 535 aa16.27■□□□□ 0.2
UPF1-211ENST00000600868 TRIM17Q9Y577 477 aa16.27■□□□□ 0.2
UPF1-211ENST00000600868 MCM3APO60318 1980 aa16.27■□□□□ 0.19
UPF1-211ENST00000600868 KIAA1217Q5T5P2 1943 aa16.26■□□□□ 0.19
UPF1-211ENST00000600868 SPATA31C2B4DYI2 1134 aa16.26■□□□□ 0.19
UPF1-211ENST00000600868 FIBPO43427 364 aa16.26■□□□□ 0.19
UPF1-211ENST00000600868 ARP10275 920 aa16.26■□□□□ 0.19
UPF1-211ENST00000600868 TGFB3P10600 412 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms