RNA–Protein interactions for RNA: ENST00000600387.5

ARHGEF1-221, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 2,272 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-221ENST00000600387 DRP2Q13474 957 aa20.6■□□□□ 0.89
ARHGEF1-221ENST00000600387 NLRP14Q86W24 1093 aa20.6■□□□□ 0.89
ARHGEF1-221ENST00000600387 ARPP21Q9UBL0 812 aaPredicted RBP20.6■□□□□ 0.89
ARHGEF1-221ENST00000600387 KAT6BQ8WYB5 2073 aa20.6■□□□□ 0.89
ARHGEF1-221ENST00000600387 SCN7AQ01118 1682 aa20.6■□□□□ 0.89
ARHGEF1-221ENST00000600387 BUB1O43683 1085 aa20.6■□□□□ 0.89
ARHGEF1-221ENST00000600387 GFPT1Q06210 699 aaPredicted RBP20.6■□□□□ 0.89
ARHGEF1-221ENST00000600387 PPP4R3AQ6IN85 833 aa20.6■□□□□ 0.89
ARHGEF1-221ENST00000600387 CACNA2D4Q7Z3S7 1137 aa20.6■□□□□ 0.89
ARHGEF1-221ENST00000600387 ANKRD13CQ8N6S4 541 aa20.6■□□□□ 0.89
ARHGEF1-221ENST00000600387 MYCBPAPQ8TBZ2 947 aa20.6■□□□□ 0.89
ARHGEF1-221ENST00000600387 CCT8L2Q96SF2 557 aa20.6■□□□□ 0.89
ARHGEF1-221ENST00000600387 CRNKL1Q9BZJ0 848 aaKnown RBP20.6■□□□□ 0.89
ARHGEF1-221ENST00000600387 NUCKS1Q9H1E3 243 aaKnown RBP20.6■□□□□ 0.89
ARHGEF1-221ENST00000600387 CXorf56Q9H5V9 222 aa20.6■□□□□ 0.89
ARHGEF1-221ENST00000600387 DCP1AQ9NPI6 582 aaPredicted RBP20.6■□□□□ 0.89
ARHGEF1-221ENST00000600387 ATP8A2Q9NTI2 1148 aa20.6■□□□□ 0.89
ARHGEF1-221ENST00000600387 FAM107AO95990 144 aa20.59■□□□□ 0.89
ARHGEF1-221ENST00000600387 HOXA7P31268 230 aaPredicted RBP20.59■□□□□ 0.89
ARHGEF1-221ENST00000600387 ATP6V1AP38606 617 aa20.59■□□□□ 0.89
ARHGEF1-221ENST00000600387 NT5C2P49902 561 aa20.59■□□□□ 0.89
ARHGEF1-221ENST00000600387 SBK1Q52WX2 424 aa20.59■□□□□ 0.89
ARHGEF1-221ENST00000600387 DGKHQ86XP1 1220 aa20.59■□□□□ 0.89
ARHGEF1-221ENST00000600387 ARFGAP2Q8N6H7 521 aa20.59■□□□□ 0.89
ARHGEF1-221ENST00000600387 VCPKMTQ9H867 229 aa20.59■□□□□ 0.89
ARHGEF1-221ENST00000600387 SLC1A4P43007 532 aa20.58■□□□□ 0.89
ARHGEF1-221ENST00000600387 EVA1CP58658 441 aa20.58■□□□□ 0.89
ARHGEF1-221ENST00000600387 GRM4Q14833 912 aa20.58■□□□□ 0.89
ARHGEF1-221ENST00000600387 PARP10Q53GL7 1025 aa20.58■□□□□ 0.89
ARHGEF1-221ENST00000600387 CAVIN4Q5BKX8 364 aa20.58■□□□□ 0.89
ARHGEF1-221ENST00000600387 EIF1ADQ8N9N8 165 aaKnown RBP20.58■□□□□ 0.89
ARHGEF1-221ENST00000600387 ZNF384Q8TF68 577 aa20.58■□□□□ 0.89
ARHGEF1-221ENST00000600387 SLC39A2Q9NP94 309 aa20.58■□□□□ 0.89
ARHGEF1-221ENST00000600387 BARHL2Q9NY43 387 aa20.58■□□□□ 0.89
ARHGEF1-221ENST00000600387 BCL9O00512 1426 aa20.58■□□□□ 0.88
ARHGEF1-221ENST00000600387 LRRC63Q05C16 580 aa20.58■□□□□ 0.88
ARHGEF1-221ENST00000600387 ACTN3Q08043 901 aaPredicted RBP20.58■□□□□ 0.88
ARHGEF1-221ENST00000600387 ITGB3BPQ13352 177 aaPredicted RBP20.58■□□□□ 0.88
ARHGEF1-221ENST00000600387 UBE4AQ14139 1066 aa20.58■□□□□ 0.88
ARHGEF1-221ENST00000600387 CDC37Q16543 378 aaPredicted RBP20.58■□□□□ 0.88
ARHGEF1-221ENST00000600387 PNMA1Q8ND90 353 aa20.58■□□□□ 0.88
ARHGEF1-221ENST00000600387 CASKIN2Q8WXE0 1202 aa20.58■□□□□ 0.88
ARHGEF1-221ENST00000600387 CALML4Q96GE6 196 aa20.58■□□□□ 0.88
ARHGEF1-221ENST00000600387 CCDC88AQ3V6T2 1871 aa20.58■□□□□ 0.88
ARHGEF1-221ENST00000600387 PVALEFA0A1B0GWK0 134 aa20.57■□□□□ 0.88
ARHGEF1-221ENST00000600387 GOLGA6L10A6NI86 522 aa20.57■□□□□ 0.88
ARHGEF1-221ENST00000600387 STXBP3O00186 592 aa20.57■□□□□ 0.88
ARHGEF1-221ENST00000600387 HSPA9P38646 679 aaKnown RBP20.57■□□□□ 0.88
ARHGEF1-221ENST00000600387 GUCY2FP51841 1108 aa20.57■□□□□ 0.88
ARHGEF1-221ENST00000600387 SMTNP53814 917 aa20.57■□□□□ 0.88
ARHGEF1-221ENST00000600387 SLC9C1Q4G0N8 1177 aa20.57■□□□□ 0.88
ARHGEF1-221ENST00000600387 HGSNATQ68CP4 663 aa20.57■□□□□ 0.88
ARHGEF1-221ENST00000600387 LRIG3Q6UXM1 1119 aa20.57■□□□□ 0.88
ARHGEF1-221ENST00000600387 STAG2Q8N3U4 1231 aa20.57■□□□□ 0.88
ARHGEF1-221ENST00000600387 GUF1Q8N442 669 aaKnown RBP20.57■□□□□ 0.88
ARHGEF1-221ENST00000600387 C3orf20Q8ND61 904 aa20.57■□□□□ 0.88
ARHGEF1-221ENST00000600387 SYN2Q92777 582 aaPredicted RBP20.57■□□□□ 0.88
ARHGEF1-221ENST00000600387 ESYT3A0FGR9 886 aa20.57■□□□□ 0.88
ARHGEF1-221ENST00000600387 EVX2Q03828 476 aa20.57■□□□□ 0.88
ARHGEF1-221ENST00000600387 TDRD12Q587J7 1177 aaKnown RBP20.57■□□□□ 0.88
ARHGEF1-221ENST00000600387 RNF187Q5TA31 235 aaPredicted RBP20.57■□□□□ 0.88
ARHGEF1-221ENST00000600387 UNC13DQ70J99 1090 aa20.57■□□□□ 0.88
ARHGEF1-221ENST00000600387 SV2BQ7L1I2 683 aa20.57■□□□□ 0.88
ARHGEF1-221ENST00000600387 HEATR3Q7Z4Q2 680 aa20.57■□□□□ 0.88
ARHGEF1-221ENST00000600387 ANKS1AQ92625 1134 aa20.57■□□□□ 0.88
ARHGEF1-221ENST00000600387 KRT12Q99456 494 aa20.57■□□□□ 0.88
ARHGEF1-221ENST00000600387 ZSCAN5CA6NGD5 496 aaPredicted RBP20.56■□□□□ 0.88
ARHGEF1-221ENST00000600387 CHUKO15111 745 aa20.56■□□□□ 0.88
ARHGEF1-221ENST00000600387 PALMO75781 387 aa20.56■□□□□ 0.88
ARHGEF1-221ENST00000600387 TNNC1P63316 161 aa20.56■□□□□ 0.88
ARHGEF1-221ENST00000600387 NAB2Q15742 525 aa20.56■□□□□ 0.88
ARHGEF1-221ENST00000600387 KRT25Q7Z3Z0 450 aa20.56■□□□□ 0.88
ARHGEF1-221ENST00000600387 TMBIM4Q9HC24 238 aa20.56■□□□□ 0.88
ARHGEF1-221ENST00000600387 STRCP1A6NGW2 1772 aa20.56■□□□□ 0.88
ARHGEF1-221ENST00000600387 SERPING1P05155 500 aa20.56■□□□□ 0.88
ARHGEF1-221ENST00000600387 MEI1Q5TIA1 1274 aa20.56■□□□□ 0.88
ARHGEF1-221ENST00000600387 FOXR2Q6PJQ5 311 aa20.56■□□□□ 0.88
ARHGEF1-221ENST00000600387 MAATS1Q7Z4T9 603 aa20.56■□□□□ 0.88
ARHGEF1-221ENST00000600387 HPS3Q969F9 1004 aa20.56■□□□□ 0.88
ARHGEF1-221ENST00000600387 NSUN4Q96CB9 384 aaKnown RBP20.56■□□□□ 0.88
ARHGEF1-221ENST00000600387 PLCB1Q9NQ66 1216 aa20.56■□□□□ 0.88
ARHGEF1-221ENST00000600387 CEP72Q9P209 647 aa20.56■□□□□ 0.88
ARHGEF1-221ENST00000600387 MAD2L2Q9UI95 211 aa20.56■□□□□ 0.88
ARHGEF1-221ENST00000600387 PLAAQ9Y263 795 aa20.56■□□□□ 0.88
ARHGEF1-221ENST00000600387 MYH4Q9Y623 1939 aa20.55■□□□□ 0.88
ARHGEF1-221ENST00000600387 CCNT1O60563 726 aaKnown RBP20.55■□□□□ 0.88
ARHGEF1-221ENST00000600387 CCDC172P0C7W6 258 aa20.55■□□□□ 0.88
ARHGEF1-221ENST00000600387 HDLBPQ00341 1268 aaKnown RBP20.55■□□□□ 0.88
ARHGEF1-221ENST00000600387 CEP85LQ5SZL2 805 aa20.55■□□□□ 0.88
ARHGEF1-221ENST00000600387 C6orf89Q6UWU4 347 aa20.55■□□□□ 0.88
ARHGEF1-221ENST00000600387 STK17AQ9UEE5 414 aa20.55■□□□□ 0.88
ARHGEF1-221ENST00000600387 PCDHGC5Q9Y5F6 944 aa20.55■□□□□ 0.88
ARHGEF1-221ENST00000600387 E7EVH7 732 aa20.55■□□□□ 0.88
ARHGEF1-221ENST00000600387 ADAMTS2O95450 1211 aa20.55■□□□□ 0.88
ARHGEF1-221ENST00000600387 RDXP35241 583 aaKnown RBP20.55■□□□□ 0.88
ARHGEF1-221ENST00000600387 SEC24CP53992 1094 aa20.55■□□□□ 0.88
ARHGEF1-221ENST00000600387 NONOQ15233 471 aaKnown RBP eCLIP20.55■□□□□ 0.88
ARHGEF1-221ENST00000600387 CCDC40Q4G0X9 1142 aa20.55■□□□□ 0.88
ARHGEF1-221ENST00000600387 SFMBT2Q5VUG0 894 aa20.55■□□□□ 0.88
ARHGEF1-221ENST00000600387 INPP4AQ96PE3 977 aaPredicted RBP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms