RNA–Protein interactions for RNA: ENST00000597704.1

KHSRP-209, Transcript of KH-type splicing regulatory protein, humanhuman

TSL 5

Gene KHSRP, Length 706 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-209ENST00000597704 hCG_1642624A0A1W2PR95 340 aa18.34■□□□□ 0.53
KHSRP-209ENST00000597704 A6NJR5 290 aa18.34■□□□□ 0.53
KHSRP-209ENST00000597704 CPT1AP50416 773 aa18.34■□□□□ 0.53
KHSRP-209ENST00000597704 RCAN1P53805 252 aa18.34■□□□□ 0.53
KHSRP-209ENST00000597704 PURAQ00577 322 aaKnown RBP18.34■□□□□ 0.53
KHSRP-209ENST00000597704 ITGA7Q13683 1181 aa18.34■□□□□ 0.53
KHSRP-209ENST00000597704 RTN1Q16799 776 aa18.34■□□□□ 0.53
KHSRP-209ENST00000597704 LY6KQ17RY6 165 aa18.34■□□□□ 0.53
KHSRP-209ENST00000597704 BLOC1S2Q6QNY1 142 aa18.34■□□□□ 0.53
KHSRP-209ENST00000597704 TDHQ8IZJ6 230 aa18.34■□□□□ 0.53
KHSRP-209ENST00000597704 BADQ92934 168 aa18.34■□□□□ 0.53
KHSRP-209ENST00000597704 USP26Q9BXU7 913 aa18.34■□□□□ 0.53
KHSRP-209ENST00000597704 TMEM39AQ9NV64 488 aa18.34■□□□□ 0.53
KHSRP-209ENST00000597704 POLR3EQ9NVU0 708 aa18.34■□□□□ 0.53
KHSRP-209ENST00000597704 DDX41Q9UJV9 622 aaKnown RBP18.34■□□□□ 0.53
KHSRP-209ENST00000597704 TET1Q8NFU7 2136 aa18.34■□□□□ 0.53
KHSRP-209ENST00000597704 SOX1O00570 391 aaPredicted RBP18.33■□□□□ 0.52
KHSRP-209ENST00000597704 MEIS2O14770 477 aa18.33■□□□□ 0.52
KHSRP-209ENST00000597704 CD4P01730 458 aa18.33■□□□□ 0.52
KHSRP-209ENST00000597704 MYCLP12524 364 aaPredicted RBP18.33■□□□□ 0.52
KHSRP-209ENST00000597704 RPS6KB1P23443 525 aa18.33■□□□□ 0.52
KHSRP-209ENST00000597704 PSMC6P62333 389 aa18.33■□□□□ 0.52
KHSRP-209ENST00000597704 ARHGAP1Q07960 439 aa18.33■□□□□ 0.52
KHSRP-209ENST00000597704 USP17L6PQ6QN14 398 aa18.33■□□□□ 0.52
KHSRP-209ENST00000597704 Q6ZUG5 572 aa18.33■□□□□ 0.52
KHSRP-209ENST00000597704 FBXL16Q8N461 479 aa18.33■□□□□ 0.52
KHSRP-209ENST00000597704 AGXT2Q9BYV1 514 aa18.33■□□□□ 0.52
KHSRP-209ENST00000597704 GOLGA8AA7E2F4 631 aa18.32■□□□□ 0.52
KHSRP-209ENST00000597704 GOLGA8BA8MQT2 603 aa18.32■□□□□ 0.52
KHSRP-209ENST00000597704 PIK3CDO00329 1044 aa18.32■□□□□ 0.52
KHSRP-209ENST00000597704 GH1P01241 217 aa18.32■□□□□ 0.52
KHSRP-209ENST00000597704 MYL3P08590 195 aa18.32■□□□□ 0.52
KHSRP-209ENST00000597704 CDC27P30260 824 aa18.32■□□□□ 0.52
KHSRP-209ENST00000597704 CCND2P30279 289 aa18.32■□□□□ 0.52
KHSRP-209ENST00000597704 APOBRQ0VD83 1088 aa18.32■□□□□ 0.52
KHSRP-209ENST00000597704 SEZ6LQ9BYH1 1024 aa18.32■□□□□ 0.52
KHSRP-209ENST00000597704 NID2Q14112 1375 aa18.31■□□□□ 0.52
KHSRP-209ENST00000597704 WDR81Q562E7 1941 aa18.31■□□□□ 0.52
KHSRP-209ENST00000597704 TANC1Q9C0D5 1861 aa18.31■□□□□ 0.52
KHSRP-209ENST00000597704 RAG1P15918 1043 aa18.31■□□□□ 0.52
KHSRP-209ENST00000597704 CASTP20810 708 aaKnown RBP18.31■□□□□ 0.52
KHSRP-209ENST00000597704 PSMA5P28066 241 aa18.31■□□□□ 0.52
KHSRP-209ENST00000597704 FGD1P98174 961 aa18.31■□□□□ 0.52
KHSRP-209ENST00000597704 LRIT3Q3SXY7 679 aa18.31■□□□□ 0.52
KHSRP-209ENST00000597704 BRDTQ58F21 947 aaPredicted RBP18.31■□□□□ 0.52
KHSRP-209ENST00000597704 AFG1LQ8WV93 481 aa18.31■□□□□ 0.52
KHSRP-209ENST00000597704 GPKOWQ92917 476 aaPredicted RBP eCLIP18.31■□□□□ 0.521e-7■■□□□ 11.6
KHSRP-209ENST00000597704 BRF1Q92994 677 aa18.31■□□□□ 0.52
KHSRP-209ENST00000597704 EMID1Q96A84 441 aaPredicted RBP18.31■□□□□ 0.52
KHSRP-209ENST00000597704 ZFP91Q96JP5 570 aaPredicted RBP18.31■□□□□ 0.52
KHSRP-209ENST00000597704 MTG1Q9BT17 334 aaPredicted RBP18.31■□□□□ 0.52
KHSRP-209ENST00000597704 MRVI1Q9Y6F6 885 aa18.31■□□□□ 0.52
KHSRP-209ENST00000597704 TLR3O15455 904 aaKnown RBP18.3■□□□□ 0.52
KHSRP-209ENST00000597704 KPNA6O60684 536 aa18.3■□□□□ 0.52
KHSRP-209ENST00000597704 TIMP1P01033 207 aa18.3■□□□□ 0.52
KHSRP-209ENST00000597704 MMP3P08254 477 aa18.3■□□□□ 0.52
KHSRP-209ENST00000597704 MRPS9P82933 396 aaKnown RBP18.3■□□□□ 0.52
KHSRP-209ENST00000597704 WWC2Q6AWC2 1192 aa18.3■□□□□ 0.52
KHSRP-209ENST00000597704 SMARCC2Q8TAQ2 1214 aa18.3■□□□□ 0.52
KHSRP-209ENST00000597704 CUL5Q93034 780 aa18.3■□□□□ 0.52
KHSRP-209ENST00000597704 LRCH3Q96II8 777 aa18.3■□□□□ 0.52
KHSRP-209ENST00000597704 PSTPIP2Q9H939 334 aa18.3■□□□□ 0.52
KHSRP-209ENST00000597704 GBF1Q92538 1859 aa18.29■□□□□ 0.52
KHSRP-209ENST00000597704 LAMA2P24043 3122 aaKnown RBP18.29■□□□□ 0.52
KHSRP-209ENST00000597704 ADD1P35611 737 aaKnown RBP18.29■□□□□ 0.52
KHSRP-209ENST00000597704 SP2Q02086 613 aa18.29■□□□□ 0.52
KHSRP-209ENST00000597704 TYW1BQ6NUM6 668 aa18.29■□□□□ 0.52
KHSRP-209ENST00000597704 KCNV1Q6PIU1 500 aa18.29■□□□□ 0.52
KHSRP-209ENST00000597704 HEATR3Q7Z4Q2 680 aa18.29■□□□□ 0.52
KHSRP-209ENST00000597704 ZSWIM6Q9HCJ5 1215 aa18.29■□□□□ 0.52
KHSRP-209ENST00000597704 NAP1L2Q9ULW6 460 aaPredicted RBP18.29■□□□□ 0.52
KHSRP-209ENST00000597704 V9GY48 417 aaPredicted RBP18.29■□□□□ 0.52
KHSRP-209ENST00000597704 B4GALT4O60513 344 aa18.28■□□□□ 0.52
KHSRP-209ENST00000597704 TGFB3P10600 412 aa18.28■□□□□ 0.52
KHSRP-209ENST00000597704 METAP2P50579 478 aaKnown RBP eCLIP18.28■□□□□ 0.52
KHSRP-209ENST00000597704 EPHB4P54760 987 aa18.28■□□□□ 0.52
KHSRP-209ENST00000597704 SEMA3FQ13275 785 aa18.28■□□□□ 0.52
KHSRP-209ENST00000597704 NBPF20Q3BBV1 942 aa18.28■□□□□ 0.52
KHSRP-209ENST00000597704 C9orf50Q5SZB4 431 aa18.28■□□□□ 0.52
KHSRP-209ENST00000597704 RUFY3Q7L099 469 aa18.28■□□□□ 0.52
KHSRP-209ENST00000597704 INPP4AQ96PE3 977 aaPredicted RBP18.28■□□□□ 0.52
KHSRP-209ENST00000597704 TRPV6Q9H1D0 765 aa18.28■□□□□ 0.52
KHSRP-209ENST00000597704 ALDH8A1Q9H2A2 487 aaPredicted RBP18.28■□□□□ 0.52
KHSRP-209ENST00000597704 STAM2O75886 525 aa18.27■□□□□ 0.52
KHSRP-209ENST00000597704 HOXD8P13378 290 aaPredicted RBP18.27■□□□□ 0.52
KHSRP-209ENST00000597704 UBA1P22314 1058 aaKnown RBP18.27■□□□□ 0.52
KHSRP-209ENST00000597704 ICAM3P32942 547 aa18.27■□□□□ 0.52
KHSRP-209ENST00000597704 EVCP57679 992 aa18.27■□□□□ 0.52
KHSRP-209ENST00000597704 FPGSQ05932 587 aa18.27■□□□□ 0.52
KHSRP-209ENST00000597704 LAMC2Q13753 1193 aa18.27■□□□□ 0.52
KHSRP-209ENST00000597704 SHHQ15465 462 aa18.27■□□□□ 0.52
KHSRP-209ENST00000597704 UBE2SQ16763 222 aa18.27■□□□□ 0.52
KHSRP-209ENST00000597704 CELF3Q5SZQ8 465 aaKnown RBP18.27■□□□□ 0.52
KHSRP-209ENST00000597704 MYSM1Q5VVJ2 828 aa18.27■□□□□ 0.52
KHSRP-209ENST00000597704 PCNX4Q63HM2 1172 aa18.27■□□□□ 0.52
KHSRP-209ENST00000597704 MFSD5Q6N075 450 aa18.27■□□□□ 0.52
KHSRP-209ENST00000597704 PPTC7Q8NI37 304 aa18.27■□□□□ 0.52
KHSRP-209ENST00000597704 KAT2BQ92831 832 aa18.27■□□□□ 0.52
KHSRP-209ENST00000597704 TM6SF1Q9BZW5 370 aa18.27■□□□□ 0.52
KHSRP-209ENST00000597704 MYH9P35579 1960 aaKnown RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms