RNA–Protein interactions for RNA: ENST00000597636.5

IRF3-219, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 2,874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-219ENST00000597636 C21orf2O43822 256 aa17.16■□□□□ 0.34
IRF3-219ENST00000597636 PCP11498 1178 aaKnown RBP17.16■□□□□ 0.34
IRF3-219ENST00000597636 RASSF7Q02833 373 aa17.16■□□□□ 0.34
IRF3-219ENST00000597636 NEDD9Q14511 834 aa17.16■□□□□ 0.34
IRF3-219ENST00000597636 PREPLQ4J6C6 727 aaPredicted RBP17.16■□□□□ 0.34
IRF3-219ENST00000597636 CCDC178Q5BJE1 867 aa17.16■□□□□ 0.34
IRF3-219ENST00000597636 RRAGAQ7L523 313 aa17.16■□□□□ 0.34
IRF3-219ENST00000597636 TRIM9Q9C026 710 aa17.16■□□□□ 0.34
IRF3-219ENST00000597636 NDST4Q9H3R1 872 aa17.16■□□□□ 0.34
IRF3-219ENST00000597636 MAGEF1Q9HAY2 307 aa17.16■□□□□ 0.34
IRF3-219ENST00000597636 E7EVH7 732 aa17.16■□□□□ 0.34
IRF3-219ENST00000597636 BUB1O43683 1085 aa17.16■□□□□ 0.34
IRF3-219ENST00000597636 ASTE1Q2TB18 679 aaPredicted RBP17.16■□□□□ 0.34
IRF3-219ENST00000597636 GIMAP7Q8NHV1 300 aa17.16■□□□□ 0.34
IRF3-219ENST00000597636 RASGRP4Q8TDF6 673 aa17.16■□□□□ 0.34
IRF3-219ENST00000597636 CASKIN2Q8WXE0 1202 aa17.16■□□□□ 0.34
IRF3-219ENST00000597636 MMRN2Q9H8L6 949 aa17.16■□□□□ 0.34
IRF3-219ENST00000597636 DUOX1Q9NRD9 1551 aa17.16■□□□□ 0.34
IRF3-219ENST00000597636 LRRC53A6NM62 1247 aa17.15■□□□□ 0.34
IRF3-219ENST00000597636 FCER1AP12319 257 aa17.15■□□□□ 0.34
IRF3-219ENST00000597636 CCDC84Q86UT8 332 aaPredicted RBP17.15■□□□□ 0.34
IRF3-219ENST00000597636 RIOK1Q9BRS2 568 aaKnown RBP17.15■□□□□ 0.34
IRF3-219ENST00000597636 SLC40A1Q9NP59 571 aa17.15■□□□□ 0.34
IRF3-219ENST00000597636 PCDHA4Q9UN74 947 aa17.15■□□□□ 0.34
IRF3-219ENST00000597636 GFPT1Q06210 699 aaPredicted RBP17.15■□□□□ 0.34
IRF3-219ENST00000597636 MCM8Q9UJA3 840 aa17.15■□□□□ 0.34
IRF3-219ENST00000597636 SPATA31A6Q5VVP1 1343 aa17.15■□□□□ 0.34
IRF3-219ENST00000597636 PLCG1P19174 1290 aa17.14■□□□□ 0.34
IRF3-219ENST00000597636 ASIC1P78348 528 aa17.14■□□□□ 0.34
IRF3-219ENST00000597636 C7orf25Q9BPX7 421 aa17.14■□□□□ 0.34
IRF3-219ENST00000597636 BRIP1Q9BX63 1249 aa17.14■□□□□ 0.34
IRF3-219ENST00000597636 SEMA6BQ9H3T3 888 aa17.14■□□□□ 0.34
IRF3-219ENST00000597636 LRP5O75197 1615 aa17.14■□□□□ 0.34
IRF3-219ENST00000597636 MYH3P11055 1940 aa17.14■□□□□ 0.33
IRF3-219ENST00000597636 CCDC194A0A1B0GVG4 234 aa17.14■□□□□ 0.33
IRF3-219ENST00000597636 NMT2O60551 498 aa17.14■□□□□ 0.33
IRF3-219ENST00000597636 SLC1A4P43007 532 aa17.14■□□□□ 0.33
IRF3-219ENST00000597636 CRKLP46109 303 aaKnown RBP17.14■□□□□ 0.33
IRF3-219ENST00000597636 CDC37Q16543 378 aaPredicted RBP17.14■□□□□ 0.33
IRF3-219ENST00000597636 CEP85LQ5SZL2 805 aa17.14■□□□□ 0.33
IRF3-219ENST00000597636 GPIHBP1Q8IV16 184 aa17.14■□□□□ 0.33
IRF3-219ENST00000597636 ARFGAP2Q8N6H7 521 aa17.14■□□□□ 0.33
IRF3-219ENST00000597636 BAP1Q92560 729 aa17.14■□□□□ 0.33
IRF3-219ENST00000597636 CYFIP2Q96F07 1278 aa17.14■□□□□ 0.33
IRF3-219ENST00000597636 KRT12Q99456 494 aa17.14■□□□□ 0.33
IRF3-219ENST00000597636 TMBIM4Q9HC24 238 aa17.14■□□□□ 0.33
IRF3-219ENST00000597636 ABCF2Q9UG63 623 aa17.14■□□□□ 0.33
IRF3-219ENST00000597636 PLAAQ9Y263 795 aa17.14■□□□□ 0.33
IRF3-219ENST00000597636 HSPA9P38646 679 aaKnown RBP17.14■□□□□ 0.33
IRF3-219ENST00000597636 CDR1P51861 262 aa17.14■□□□□ 0.33
IRF3-219ENST00000597636 WLSQ5T9L3 541 aa17.14■□□□□ 0.33
IRF3-219ENST00000597636 MAATS1Q7Z4T9 603 aa17.14■□□□□ 0.33
IRF3-219ENST00000597636 SEPT12Q8IYM1 358 aa17.14■□□□□ 0.33
IRF3-219ENST00000597636 ACTR5Q9H9F9 607 aaPredicted RBP17.14■□□□□ 0.33
IRF3-219ENST00000597636 SH3GLB2Q9NR46 395 aa17.14■□□□□ 0.33
IRF3-219ENST00000597636 SSU72P8A0A1W2PR75 194 aa17.13■□□□□ 0.33
IRF3-219ENST00000597636 GRID2IPA4D2P6 1211 aa17.13■□□□□ 0.33
IRF3-219ENST00000597636 TRADDQ15628 312 aa17.13■□□□□ 0.33
IRF3-219ENST00000597636 COBLL1Q53SF7 1204 aa17.13■□□□□ 0.33
IRF3-219ENST00000597636 CENPPQ6IPU0 288 aa17.13■□□□□ 0.33
IRF3-219ENST00000597636 CCDC121Q6ZUS5 278 aa17.13■□□□□ 0.33
IRF3-219ENST00000597636 CABP7Q86V35 215 aa17.13■□□□□ 0.33
IRF3-219ENST00000597636 PPANQ9NQ55 473 aaKnown RBP17.13■□□□□ 0.33
IRF3-219ENST00000597636 NRAPQ86VF7 1730 aa17.13■□□□□ 0.33
IRF3-219ENST00000597636 FLT1P17948 1338 aa17.13■□□□□ 0.33
IRF3-219ENST00000597636 M0R2N6 131 aa17.13■□□□□ 0.33
IRF3-219ENST00000597636 MAN2A1Q16706 1144 aa17.13■□□□□ 0.33
IRF3-219ENST00000597636 DZIP3Q86Y13 1208 aaKnown RBP17.13■□□□□ 0.33
IRF3-219ENST00000597636 KIAA0895Q8NCT3 520 aa17.13■□□□□ 0.33
IRF3-219ENST00000597636 GPKOWQ92917 476 aaPredicted RBP eCLIP17.13■□□□□ 0.33
IRF3-219ENST00000597636 CCDC114Q96M63 670 aa17.13■□□□□ 0.33
IRF3-219ENST00000597636 CENPHQ9H3R5 247 aa17.13■□□□□ 0.33
IRF3-219ENST00000597636 GOLGA6L10A6NI86 522 aa17.12■□□□□ 0.33
IRF3-219ENST00000597636 LAD1O00515 517 aa17.12■□□□□ 0.33
IRF3-219ENST00000597636 ELF1P32519 619 aa17.12■□□□□ 0.33
IRF3-219ENST00000597636 HPDP32754 393 aaPredicted RBP17.12■□□□□ 0.33
IRF3-219ENST00000597636 PRPHP41219 470 aa17.12■□□□□ 0.33
IRF3-219ENST00000597636 DYNLL1P63167 89 aaKnown RBP17.12■□□□□ 0.33
IRF3-219ENST00000597636 CNNM4Q6P4Q7 775 aa17.12■□□□□ 0.33
IRF3-219ENST00000597636 PDXDC1Q6P996 788 aa17.12■□□□□ 0.33
IRF3-219ENST00000597636 C3orf20Q8ND61 904 aa17.12■□□□□ 0.33
IRF3-219ENST00000597636 PLCB1Q9NQ66 1216 aa17.12■□□□□ 0.33
IRF3-219ENST00000597636 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.12■□□□□ 0.33
IRF3-219ENST00000597636 SRCAPQ6ZRS2 3230 aa17.12■□□□□ 0.33
IRF3-219ENST00000597636 GOLGA6L7A0A1B0GV03 622 aa17.12■□□□□ 0.33
IRF3-219ENST00000597636 GMNCA6NCL1 334 aa17.12■□□□□ 0.33
IRF3-219ENST00000597636 RBAK-RBAKDNI3L0D1 243 aa17.12■□□□□ 0.33
IRF3-219ENST00000597636 INF2Q27J81 1249 aa17.12■□□□□ 0.33
IRF3-219ENST00000597636 HGSNATQ68CP4 663 aa17.12■□□□□ 0.33
IRF3-219ENST00000597636 LRIG3Q6UXM1 1119 aa17.12■□□□□ 0.33
IRF3-219ENST00000597636 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.12■□□□□ 0.337e-8■■■■■ 60.2
IRF3-219ENST00000597636 TCP11L1Q9NUJ3 509 aa17.12■□□□□ 0.33
IRF3-219ENST00000597636 USP17L12C9JPN9 530 aa17.11■□□□□ 0.33
IRF3-219ENST00000597636 USP17L21D6R901 530 aa17.11■□□□□ 0.33
IRF3-219ENST00000597636 ORC4O43929 436 aa17.11■□□□□ 0.33
IRF3-219ENST00000597636 PALMO75781 387 aa17.11■□□□□ 0.33
IRF3-219ENST00000597636 KIF5BP33176 963 aa17.11■□□□□ 0.33
IRF3-219ENST00000597636 BICDL1Q6ZP65 573 aa17.11■□□□□ 0.33
IRF3-219ENST00000597636 DOT1LQ8TEK3 1739 aa17.11■□□□□ 0.33
IRF3-219ENST00000597636 HPS3Q969F9 1004 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms