RNA–Protein interactions for RNA: ENST00000597400.5

ZNF548-207, Transcript of zinc finger protein 548, humanhuman

TSL 3 BASIC

Gene ZNF548, Length 589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-207ENST00000597400 TSPY2A6NKD2 308 aa12.89□□□□□ -0.35
ZNF548-207ENST00000597400 DCXO43602 365 aa12.89□□□□□ -0.35
ZNF548-207ENST00000597400 KPNA6O60684 536 aa12.89□□□□□ -0.35
ZNF548-207ENST00000597400 ZFYP08048 801 aaPredicted RBP12.89□□□□□ -0.35
ZNF548-207ENST00000597400 ZP2Q05996 745 aa12.89□□□□□ -0.35
ZNF548-207ENST00000597400 ARHGAP1Q07960 439 aa12.89□□□□□ -0.35
ZNF548-207ENST00000597400 HIC1Q14526 733 aa12.89□□□□□ -0.35
ZNF548-207ENST00000597400 RNF207Q6ZRF8 634 aa12.89□□□□□ -0.35
ZNF548-207ENST00000597400 DCAF4Q8WV16 495 aa12.89□□□□□ -0.35
ZNF548-207ENST00000597400 SNX27Q96L92 541 aa12.89□□□□□ -0.35
ZNF548-207ENST00000597400 GTF2IRD1Q9UHL9 959 aa12.89□□□□□ -0.35
ZNF548-207ENST00000597400 LAMA4Q16363 1823 aa12.89□□□□□ -0.35
ZNF548-207ENST00000597400 DCHS1Q96JQ0 3298 aa12.88□□□□□ -0.35
ZNF548-207ENST00000597400 ALADP13716 330 aa12.88□□□□□ -0.35
ZNF548-207ENST00000597400 HNRNPUQ00839 825 aaKnown RBP eCLIP12.88□□□□□ -0.35
ZNF548-207ENST00000597400 LY6KQ17RY6 165 aa12.88□□□□□ -0.35
ZNF548-207ENST00000597400 BRDTQ58F21 947 aaPredicted RBP12.88□□□□□ -0.35
ZNF548-207ENST00000597400 HFE2Q6ZVN8 426 aa12.88□□□□□ -0.35
ZNF548-207ENST00000597400 CCDC155Q8N6L0 562 aa12.88□□□□□ -0.35
ZNF548-207ENST00000597400 FBXO22Q8NEZ5 403 aa12.88□□□□□ -0.35
ZNF548-207ENST00000597400 SP7Q8TDD2 431 aaPredicted RBP12.88□□□□□ -0.35
ZNF548-207ENST00000597400 MRPL38Q96DV4 380 aaKnown RBP12.88□□□□□ -0.35
ZNF548-207ENST00000597400 GPCPD1Q9NPB8 672 aa12.88□□□□□ -0.35
ZNF548-207ENST00000597400 COL20A1Q9P218 1284 aa12.88□□□□□ -0.35
ZNF548-207ENST00000597400 HDAC6Q9UBN7 1215 aa12.88□□□□□ -0.35
ZNF548-207ENST00000597400 ABHD14A-ACY1A0A1B0GW23 586 aa12.87□□□□□ -0.35
ZNF548-207ENST00000597400 C19orf67A6NJJ6 358 aa12.87□□□□□ -0.35
ZNF548-207ENST00000597400 HTRA4P83105 476 aaPredicted RBP12.87□□□□□ -0.35
ZNF548-207ENST00000597400 ZNF200P98182 395 aaPredicted RBP12.87□□□□□ -0.35
ZNF548-207ENST00000597400 COL19A1Q14993 1142 aa12.87□□□□□ -0.35
ZNF548-207ENST00000597400 ZMYM1Q5SVZ6 1142 aa12.87□□□□□ -0.35
ZNF548-207ENST00000597400 ZNF618Q5T7W0 954 aa12.87□□□□□ -0.35
ZNF548-207ENST00000597400 VPS53Q5VIR6 699 aa12.87□□□□□ -0.35
ZNF548-207ENST00000597400 CHST3Q7LGC8 479 aa12.87□□□□□ -0.35
ZNF548-207ENST00000597400 DNERQ8NFT8 737 aa12.87□□□□□ -0.35
ZNF548-207ENST00000597400 TMEM47Q9BQJ4 181 aa12.87□□□□□ -0.35
ZNF548-207ENST00000597400 OSBPL7Q9BZF2 842 aa12.87□□□□□ -0.35
ZNF548-207ENST00000597400 NACAP1Q9BZK3 213 aa12.87□□□□□ -0.35
ZNF548-207ENST00000597400 RANBP6O60518 1105 aaKnown RBP12.86□□□□□ -0.35
ZNF548-207ENST00000597400 LGR5O75473 907 aa12.86□□□□□ -0.35
ZNF548-207ENST00000597400 SLC3A2P08195 630 aaKnown RBP12.86□□□□□ -0.35
ZNF548-207ENST00000597400 ZNF286BP0CG31 522 aa12.86□□□□□ -0.35
ZNF548-207ENST00000597400 PDHBP11177 359 aa12.86□□□□□ -0.35
ZNF548-207ENST00000597400 IRS1P35568 1242 aa12.86□□□□□ -0.35
ZNF548-207ENST00000597400 CSPP1Q1MSJ5 1256 aa12.86□□□□□ -0.35
ZNF548-207ENST00000597400 EPC2Q52LR7 807 aa12.86□□□□□ -0.35
ZNF548-207ENST00000597400 TCEAL5Q5H9L2 206 aa12.86□□□□□ -0.35
ZNF548-207ENST00000597400 PI4K2BQ8TCG2 481 aa12.86□□□□□ -0.35
ZNF548-207ENST00000597400 OTUD7AQ8TE49 926 aaPredicted RBP12.86□□□□□ -0.35
ZNF548-207ENST00000597400 TBC1D5Q92609 795 aa12.86□□□□□ -0.35
ZNF548-207ENST00000597400 CPVLQ9H3G5 476 aa12.86□□□□□ -0.35
ZNF548-207ENST00000597400 WDR19Q8NEZ3 1342 aa12.86□□□□□ -0.35
ZNF548-207ENST00000597400 PLXNA3P51805 1871 aa12.85□□□□□ -0.35
ZNF548-207ENST00000597400 HAS3O00219 553 aa12.85□□□□□ -0.35
ZNF548-207ENST00000597400 F2P00734 622 aa12.85□□□□□ -0.35
ZNF548-207ENST00000597400 GH1P01241 217 aa12.85□□□□□ -0.35
ZNF548-207ENST00000597400 LTBRP36941 435 aa12.85□□□□□ -0.35
ZNF548-207ENST00000597400 PSEN2P49810 448 aa12.85□□□□□ -0.35
ZNF548-207ENST00000597400 IKBKEQ14164 716 aa12.85□□□□□ -0.35
ZNF548-207ENST00000597400 USH1GQ495M9 461 aa12.85□□□□□ -0.35
ZNF548-207ENST00000597400 C20orf194Q5TEA3 1177 aa12.85□□□□□ -0.35
ZNF548-207ENST00000597400 SEPT14Q6ZU15 432 aa12.85□□□□□ -0.35
ZNF548-207ENST00000597400 MYOCDQ8IZQ8 938 aa12.85□□□□□ -0.35
ZNF548-207ENST00000597400 BANK1Q8NDB2 785 aa12.85□□□□□ -0.35
ZNF548-207ENST00000597400 PABPC5Q96DU9 382 aaKnown RBP12.85□□□□□ -0.35
ZNF548-207ENST00000597400 ALG1Q9BT22 464 aa12.85□□□□□ -0.35
ZNF548-207ENST00000597400 ANAPC4Q9UJX5 808 aa12.85□□□□□ -0.35
ZNF548-207ENST00000597400 INSL6Q9Y581 213 aa12.85□□□□□ -0.35
ZNF548-207ENST00000597400 LOXHD1Q8IVV2 1947 aa12.84□□□□□ -0.35
ZNF548-207ENST00000597400 ORC4O43929 436 aa12.84□□□□□ -0.35
ZNF548-207ENST00000597400 PARNO95453 639 aaKnown RBP12.84□□□□□ -0.35
ZNF548-207ENST00000597400 FGRP09769 529 aa12.84□□□□□ -0.35
ZNF548-207ENST00000597400 SNHG28P0DPA3 235 aa12.84□□□□□ -0.35
ZNF548-207ENST00000597400 DLX2Q07687 328 aaPredicted RBP12.84□□□□□ -0.35
ZNF548-207ENST00000597400 ZNF543Q08ER8 600 aa12.84□□□□□ -0.35
ZNF548-207ENST00000597400 PTK7Q13308 1070 aa12.84□□□□□ -0.35
ZNF548-207ENST00000597400 PPP4R3BQ5MIZ7 849 aa12.84□□□□□ -0.35
ZNF548-207ENST00000597400 PRSS33Q8NF86 280 aa12.84□□□□□ -0.35
ZNF548-207ENST00000597400 DBF4BQ8NFT6 615 aa12.84□□□□□ -0.35
ZNF548-207ENST00000597400 TAAR1Q96RJ0 339 aa12.84□□□□□ -0.35
ZNF548-207ENST00000597400 CRBNQ96SW2 442 aa12.84□□□□□ -0.35
ZNF548-207ENST00000597400 KCNH6Q9H252 994 aa12.84□□□□□ -0.35
ZNF548-207ENST00000597400 MUTYHQ9UIF7 546 aa12.84□□□□□ -0.35
ZNF548-207ENST00000597400 SPTBN4Q9H254 2564 aa12.84□□□□□ -0.35
ZNF548-207ENST00000597400 PLXNA4Q9HCM2 1894 aa12.84□□□□□ -0.35
ZNF548-207ENST00000597400 ZDBF2Q9HCK1 2354 aa12.84□□□□□ -0.35
ZNF548-207ENST00000597400 H3BNC9 293 aa12.83□□□□□ -0.36
ZNF548-207ENST00000597400 EFCAB14O75071 495 aa12.83□□□□□ -0.36
ZNF548-207ENST00000597400 LINC00271P0C7V0 271 aa12.83□□□□□ -0.36
ZNF548-207ENST00000597400 TOP1P11387 765 aaKnown RBP12.83□□□□□ -0.36
ZNF548-207ENST00000597400 MFSD10Q14728 455 aa12.83□□□□□ -0.36
ZNF548-207ENST00000597400 KIAA0753Q2KHM9 967 aa12.83□□□□□ -0.36
ZNF548-207ENST00000597400 PUS10Q3MIT2 529 aaKnown RBP12.83□□□□□ -0.36
ZNF548-207ENST00000597400 TIGD5Q53EQ6 642 aa12.83□□□□□ -0.36
ZNF548-207ENST00000597400 ADHFE1Q8IWW8 467 aa12.83□□□□□ -0.36
ZNF548-207ENST00000597400 C7orf31Q8N865 590 aa12.83□□□□□ -0.36
ZNF548-207ENST00000597400 FSD1Q9BTV5 496 aa12.83□□□□□ -0.36
ZNF548-207ENST00000597400 PRKAG3Q9UGI9 489 aa12.83□□□□□ -0.36
ZNF548-207ENST00000597400 DDX41Q9UJV9 622 aaKnown RBP12.83□□□□□ -0.36
ZNF548-207ENST00000597400 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms