RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 RBAK-RBAKDNI3L0D1 243 aa19.77■□□□□ 0.76
CCDC9-202ENST00000595659 TROAPQ12815 778 aa19.77■□□□□ 0.76
CCDC9-202ENST00000595659 SART3Q15020 963 aaKnown RBP19.77■□□□□ 0.76
CCDC9-202ENST00000595659 CATIPQ7Z7H3 387 aa19.77■□□□□ 0.76
CCDC9-202ENST00000595659 FCHSD1Q86WN1 690 aa19.77■□□□□ 0.76
CCDC9-202ENST00000595659 SKAP1Q86WV1 359 aa19.77■□□□□ 0.76
CCDC9-202ENST00000595659 IL31RAQ8NI17 732 aa19.77■□□□□ 0.76
CCDC9-202ENST00000595659 IGDCC4Q8TDY8 1250 aa19.77■□□□□ 0.76
CCDC9-202ENST00000595659 PDCD2LQ9BRP1 358 aa19.77■□□□□ 0.76
CCDC9-202ENST00000595659 MYL10Q9BUA6 226 aa19.77■□□□□ 0.76
CCDC9-202ENST00000595659 RIOX1Q9H6W3 641 aa19.77■□□□□ 0.76
CCDC9-202ENST00000595659 MSRAQ9UJ68 235 aa19.77■□□□□ 0.76
CCDC9-202ENST00000595659 NOD1Q9Y239 953 aa19.77■□□□□ 0.76
CCDC9-202ENST00000595659 YBX2Q9Y2T7 364 aaKnown RBP19.77■□□□□ 0.76
CCDC9-202ENST00000595659 MYOGP15173 224 aa19.76■□□□□ 0.75
CCDC9-202ENST00000595659 MB21D2Q8IYB1 491 aaPredicted RBP19.76■□□□□ 0.75
CCDC9-202ENST00000595659 RETREG2Q8NC44 543 aa19.76■□□□□ 0.75
CCDC9-202ENST00000595659 KAT2BQ92831 832 aa19.76■□□□□ 0.75
CCDC9-202ENST00000595659 PRDM12Q9H4Q4 367 aa19.76■□□□□ 0.75
CCDC9-202ENST00000595659 SLC4A7Q9Y6M7 1214 aa19.76■□□□□ 0.75
CCDC9-202ENST00000595659 GCOM1H8Y6P7 765 aaPredicted RBP19.75■□□□□ 0.75
CCDC9-202ENST00000595659 RGS20O76081 388 aa19.75■□□□□ 0.75
CCDC9-202ENST00000595659 POLR2MP0CAP2 368 aa19.75■□□□□ 0.75
CCDC9-202ENST00000595659 COL9A3Q14050 684 aaPredicted RBP19.75■□□□□ 0.75
CCDC9-202ENST00000595659 PTGISQ16647 500 aa19.75■□□□□ 0.75
CCDC9-202ENST00000595659 GDF6Q6KF10 455 aaPredicted RBP19.75■□□□□ 0.75
CCDC9-202ENST00000595659 ALG1Q9BT22 464 aa19.75■□□□□ 0.75
CCDC9-202ENST00000595659 COL25A1Q9BXS0 654 aaPredicted RBP19.75■□□□□ 0.75
CCDC9-202ENST00000595659 EYSQ5T1H1 3165 aa19.75■□□□□ 0.75
CCDC9-202ENST00000595659 PNMA6FA0A0J9YX94 578 aa19.74■□□□□ 0.75
CCDC9-202ENST00000595659 IQCF3P0C7M6 154 aa19.74■□□□□ 0.75
CCDC9-202ENST00000595659 CASTP20810 708 aaKnown RBP19.74■□□□□ 0.75
CCDC9-202ENST00000595659 GHRHRQ02643 423 aa19.74■□□□□ 0.75
CCDC9-202ENST00000595659 PTPN11Q06124 597 aaPredicted RBP19.74■□□□□ 0.75
CCDC9-202ENST00000595659 PGM5Q15124 567 aa19.74■□□□□ 0.75
CCDC9-202ENST00000595659 RAB30Q15771 203 aa19.74■□□□□ 0.75
CCDC9-202ENST00000595659 DGKDQ16760 1214 aa19.74■□□□□ 0.75
CCDC9-202ENST00000595659 DHX37Q8IY37 1157 aaKnown RBP19.74■□□□□ 0.75
CCDC9-202ENST00000595659 USP38Q8NB14 1042 aa19.74■□□□□ 0.75
CCDC9-202ENST00000595659 PPM1EQ8WY54 764 aa19.74■□□□□ 0.75
CCDC9-202ENST00000595659 GPKOWQ92917 476 aaPredicted RBP eCLIP19.74■□□□□ 0.75
CCDC9-202ENST00000595659 CDH23Q9H251 3354 aa19.73■□□□□ 0.75
CCDC9-202ENST00000595659 ZNF286BP0CG31 522 aa19.73■□□□□ 0.75
CCDC9-202ENST00000595659 LAMC2Q13753 1193 aa19.73■□□□□ 0.75
CCDC9-202ENST00000595659 VSIG10LQ86VR7 867 aa19.73■□□□□ 0.75
CCDC9-202ENST00000595659 FTOQ9C0B1 505 aaKnown RBP eCLIP19.73■□□□□ 0.75
CCDC9-202ENST00000595659 LSG1Q9H089 658 aaKnown RBP19.73■□□□□ 0.75
CCDC9-202ENST00000595659 LY9Q9HBG7 655 aa19.73■□□□□ 0.75
CCDC9-202ENST00000595659 UNC80Q8N2C7 3258 aa19.72■□□□□ 0.75
CCDC9-202ENST00000595659 PRC1O43663 620 aa19.72■□□□□ 0.75
CCDC9-202ENST00000595659 ATP2A2P16615 1042 aaKnown RBP19.72■□□□□ 0.75
CCDC9-202ENST00000595659 PSEN2P49810 448 aa19.72■□□□□ 0.75
CCDC9-202ENST00000595659 SP2Q02086 613 aa19.72■□□□□ 0.75
CCDC9-202ENST00000595659 BFSP2Q13515 415 aa19.72■□□□□ 0.75
CCDC9-202ENST00000595659 CASC1Q6TDU7 716 aa19.72■□□□□ 0.75
CCDC9-202ENST00000595659 NFXL1Q6ZNB6 911 aa19.72■□□□□ 0.75
CCDC9-202ENST00000595659 RAB11FIP4Q86YS3 637 aa19.72■□□□□ 0.75
CCDC9-202ENST00000595659 ZNF654Q8IZM8 581 aa19.72■□□□□ 0.75
CCDC9-202ENST00000595659 CMTR1Q8N1G2 835 aaKnown RBP19.72■□□□□ 0.75
CCDC9-202ENST00000595659 CTAGE1Q96RT6 745 aa19.72■□□□□ 0.75
CCDC9-202ENST00000595659 SLC28A3Q9HAS3 691 aa19.72■□□□□ 0.75
CCDC9-202ENST00000595659 MAP3K20Q9NYL2 800 aaKnown RBP19.72■□□□□ 0.75
CCDC9-202ENST00000595659 HDAC6Q9UBN7 1215 aa19.72■□□□□ 0.75
CCDC9-202ENST00000595659 SLC27A2O14975 620 aa19.71■□□□□ 0.75
CCDC9-202ENST00000595659 GGPS1O95749 300 aa19.71■□□□□ 0.75
CCDC9-202ENST00000595659 RXRAP19793 462 aa19.71■□□□□ 0.75
CCDC9-202ENST00000595659 CCND2P30279 289 aa19.71■□□□□ 0.75
CCDC9-202ENST00000595659 MFSD10Q14728 455 aa19.71■□□□□ 0.75
CCDC9-202ENST00000595659 CELF3Q5SZQ8 465 aaKnown RBP19.71■□□□□ 0.75
CCDC9-202ENST00000595659 MYSM1Q5VVJ2 828 aa19.71■□□□□ 0.75
CCDC9-202ENST00000595659 C7orf31Q8N865 590 aa19.71■□□□□ 0.75
CCDC9-202ENST00000595659 PPTC7Q8NI37 304 aa19.71■□□□□ 0.75
CCDC9-202ENST00000595659 EMID1Q96A84 441 aaPredicted RBP19.71■□□□□ 0.75
CCDC9-202ENST00000595659 SPATA33Q96N06 139 aa19.71■□□□□ 0.75
CCDC9-202ENST00000595659 GAS2L1Q99501 681 aaPredicted RBP19.71■□□□□ 0.75
CCDC9-202ENST00000595659 ESYT1Q9BSJ8 1104 aa19.71■□□□□ 0.75
CCDC9-202ENST00000595659 LRRC2Q9BYS8 371 aa19.71■□□□□ 0.75
CCDC9-202ENST00000595659 BCAS3Q9H6U6 928 aa19.71■□□□□ 0.75
CCDC9-202ENST00000595659 RTEL1Q9NZ71 1219 aa19.71■□□□□ 0.75
CCDC9-202ENST00000595659 PITPNM1O00562 1244 aa19.7■□□□□ 0.74
CCDC9-202ENST00000595659 PLEKHA8P1O95397 391 aa19.7■□□□□ 0.74
CCDC9-202ENST00000595659 PFKMP08237 780 aa19.7■□□□□ 0.74
CCDC9-202ENST00000595659 ACTN1P12814 892 aa19.7■□□□□ 0.74
CCDC9-202ENST00000595659 IGFBP4P22692 258 aa19.7■□□□□ 0.74
CCDC9-202ENST00000595659 ZNF200P98182 395 aaPredicted RBP19.7■□□□□ 0.74
CCDC9-202ENST00000595659 TRAF1Q13077 416 aa19.7■□□□□ 0.74
CCDC9-202ENST00000595659 ADGRE1Q14246 886 aa19.7■□□□□ 0.74
CCDC9-202ENST00000595659 KIAA0753Q2KHM9 967 aa19.7■□□□□ 0.74
CCDC9-202ENST00000595659 HSDL1Q3SXM5 330 aa19.7■□□□□ 0.74
CCDC9-202ENST00000595659 SESTD1Q86VW0 696 aa19.7■□□□□ 0.74
CCDC9-202ENST00000595659 SAMD3Q8N6K7 520 aa19.7■□□□□ 0.74
CCDC9-202ENST00000595659 CTCFLQ8NI51 663 aaPredicted RBP19.7■□□□□ 0.74
CCDC9-202ENST00000595659 DHX38Q92620 1227 aaKnown RBP19.7■□□□□ 0.74
CCDC9-202ENST00000595659 ANO2Q9NQ90 1003 aa19.7■□□□□ 0.74
CCDC9-202ENST00000595659 PRDM6Q9NQX0 595 aa19.7■□□□□ 0.74
CCDC9-202ENST00000595659 UBA1P22314 1058 aaKnown RBP19.69■□□□□ 0.74
CCDC9-202ENST00000595659 MCM5P33992 734 aa19.69■□□□□ 0.74
CCDC9-202ENST00000595659 RFC2P35250 354 aa19.69■□□□□ 0.74
CCDC9-202ENST00000595659 CCDC85BQ15834 202 aaPredicted RBP19.69■□□□□ 0.74
CCDC9-202ENST00000595659 PPP2R2DQ66LE6 453 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms