RNA–Protein interactions for RNA: ENST00000594372.1

SIN3B-204, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 3

Gene SIN3B, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-204ENST00000594372 PHOSPHO2Q8TCD6 241 aa14.38□□□□□ -0.11
SIN3B-204ENST00000594372 HDAC6Q9UBN7 1215 aa14.38□□□□□ -0.11
SIN3B-204ENST00000594372 KIF28PB7ZC32 967 aa14.37□□□□□ -0.11
SIN3B-204ENST00000594372 NKRFO15226 690 aaKnown RBP eCLIP14.37□□□□□ -0.11
SIN3B-204ENST00000594372 CKBP12277 381 aa14.37□□□□□ -0.11
SIN3B-204ENST00000594372 SELPP16109 830 aa14.37□□□□□ -0.11
SIN3B-204ENST00000594372 MBTPS1Q14703 1052 aa14.37□□□□□ -0.11
SIN3B-204ENST00000594372 ALX1Q15699 326 aa14.37□□□□□ -0.11
SIN3B-204ENST00000594372 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.37□□□□□ -0.11
SIN3B-204ENST00000594372 SYTL5Q8TDW5 730 aaPredicted RBP14.37□□□□□ -0.11
SIN3B-204ENST00000594372 OSBPL7Q9BZF2 842 aa14.37□□□□□ -0.11
SIN3B-204ENST00000594372 SUGCTQ9HAC7 445 aa14.37□□□□□ -0.11
SIN3B-204ENST00000594372 VAT1LQ9HCJ6 419 aa14.37□□□□□ -0.11
SIN3B-204ENST00000594372 COG5Q9UP83 839 aa14.37□□□□□ -0.11
SIN3B-204ENST00000594372 WDR19Q8NEZ3 1342 aa14.37□□□□□ -0.11
SIN3B-204ENST00000594372 LINC01553A4QN01 128 aa14.36□□□□□ -0.11
SIN3B-204ENST00000594372 GH1P01241 217 aa14.36□□□□□ -0.11
SIN3B-204ENST00000594372 SNHG28P0DPA3 235 aa14.36□□□□□ -0.11
SIN3B-204ENST00000594372 PSEN2P49810 448 aa14.36□□□□□ -0.11
SIN3B-204ENST00000594372 PTPN11Q06124 597 aaPredicted RBP14.36□□□□□ -0.11
SIN3B-204ENST00000594372 TMEM31Q5JXX7 168 aa14.36□□□□□ -0.11
SIN3B-204ENST00000594372 DNERQ8NFT8 737 aa14.36□□□□□ -0.11
SIN3B-204ENST00000594372 AFAP1L1Q8TED9 768 aa14.36□□□□□ -0.11
SIN3B-204ENST00000594372 C17orf80Q9BSJ5 609 aa14.36□□□□□ -0.11
SIN3B-204ENST00000594372 HELLSQ9NRZ9 838 aa14.36□□□□□ -0.11
SIN3B-204ENST00000594372 TCP11L1Q9NUJ3 509 aa14.36□□□□□ -0.11
SIN3B-204ENST00000594372 KIAA1671Q9BY89 1806 aa14.36□□□□□ -0.11
SIN3B-204ENST00000594372 KPNA6O60684 536 aa14.35□□□□□ -0.11
SIN3B-204ENST00000594372 BAIAP3O94812 1187 aa14.35□□□□□ -0.11
SIN3B-204ENST00000594372 IL9P15248 144 aa14.35□□□□□ -0.11
SIN3B-204ENST00000594372 KCNA5P22460 613 aa14.35□□□□□ -0.11
SIN3B-204ENST00000594372 PDE1AP54750 535 aa14.35□□□□□ -0.11
SIN3B-204ENST00000594372 QRICH1Q2TAL8 776 aa14.35□□□□□ -0.11
SIN3B-204ENST00000594372 MCMDC2Q4G0Z9 681 aa14.35□□□□□ -0.11
SIN3B-204ENST00000594372 ZNF618Q5T7W0 954 aa14.35□□□□□ -0.11
SIN3B-204ENST00000594372 CNKSR3Q6P9H4 555 aa14.35□□□□□ -0.11
SIN3B-204ENST00000594372 TRAF7Q6Q0C0 670 aa14.35□□□□□ -0.11
SIN3B-204ENST00000594372 MFSD6Q6ZSS7 791 aa14.35□□□□□ -0.11
SIN3B-204ENST00000594372 ADGRF4Q8IZF3 695 aa14.35□□□□□ -0.11
SIN3B-204ENST00000594372 EVI5LQ96CN4 794 aa14.35□□□□□ -0.11
SIN3B-204ENST00000594372 GTF2IRD1Q9UHL9 959 aa14.35□□□□□ -0.11
SIN3B-204ENST00000594372 RALGAPA2Q2PPJ7 1873 aa14.35□□□□□ -0.11
SIN3B-204ENST00000594372 WDFY4Q6ZS81 3184 aa14.34□□□□□ -0.11
SIN3B-204ENST00000594372 LOC102724159A0A0B4J2E5 919 aa14.34□□□□□ -0.11
SIN3B-204ENST00000594372 DHX16O60231 1041 aaKnown RBP14.34□□□□□ -0.11
SIN3B-204ENST00000594372 HOXD11P31277 338 aaPredicted RBP14.34□□□□□ -0.11
SIN3B-204ENST00000594372 MFSD10Q14728 455 aa14.34□□□□□ -0.11
SIN3B-204ENST00000594372 PWP2Q15269 919 aaKnown RBP14.34□□□□□ -0.11
SIN3B-204ENST00000594372 KIAA0753Q2KHM9 967 aa14.34□□□□□ -0.11
SIN3B-204ENST00000594372 TRIM71Q2Q1W2 868 aaKnown RBP14.34□□□□□ -0.11
SIN3B-204ENST00000594372 CCDC155Q8N6L0 562 aa14.34□□□□□ -0.11
SIN3B-204ENST00000594372 C7orf31Q8N865 590 aa14.34□□□□□ -0.11
SIN3B-204ENST00000594372 IL31RAQ8NI17 732 aa14.34□□□□□ -0.11
SIN3B-204ENST00000594372 CAGE1Q8TC20 777 aa14.34□□□□□ -0.11
SIN3B-204ENST00000594372 GPKOWQ92917 476 aaPredicted RBP eCLIP14.34□□□□□ -0.11
SIN3B-204ENST00000594372 RILPL2Q969X0 211 aa14.34□□□□□ -0.11
SIN3B-204ENST00000594372 RMDN3Q96TC7 470 aa14.34□□□□□ -0.11
SIN3B-204ENST00000594372 MPHOSPH6Q99547 160 aaKnown RBP14.34□□□□□ -0.11
SIN3B-204ENST00000594372 BCAS3Q9H6U6 928 aa14.34□□□□□ -0.11
SIN3B-204ENST00000594372 UBE2ZQ9H832 354 aaPredicted RBP14.34□□□□□ -0.11
SIN3B-204ENST00000594372 DDX41Q9UJV9 622 aaKnown RBP14.34□□□□□ -0.11
SIN3B-204ENST00000594372 HCN4Q9Y3Q4 1203 aa14.34□□□□□ -0.11
SIN3B-204ENST00000594372 TRIOO75962 3097 aa14.34□□□□□ -0.11
SIN3B-204ENST00000594372 CCDC171Q6TFL3 1326 aa14.34□□□□□ -0.11
SIN3B-204ENST00000594372 ZNF318Q5VUA4 2279 aa14.33□□□□□ -0.12
SIN3B-204ENST00000594372 TRIM6-TRIM34B2RNG4 842 aa14.33□□□□□ -0.12
SIN3B-204ENST00000594372 KDM4AO75164 1064 aa14.33□□□□□ -0.12
SIN3B-204ENST00000594372 GJB5O95377 273 aa14.33□□□□□ -0.12
SIN3B-204ENST00000594372 CXCL10P02778 98 aa14.33□□□□□ -0.12
SIN3B-204ENST00000594372 MYCLP12524 364 aaPredicted RBP14.33□□□□□ -0.12
SIN3B-204ENST00000594372 CASTP20810 708 aaKnown RBP14.33□□□□□ -0.12
SIN3B-204ENST00000594372 ARHGEF16Q5VV41 709 aa14.33□□□□□ -0.12
SIN3B-204ENST00000594372 PNMA1Q8ND90 353 aa14.33□□□□□ -0.12
SIN3B-204ENST00000594372 TGS1Q96RS0 853 aaKnown RBP14.33□□□□□ -0.12
SIN3B-204ENST00000594372 CRBNQ96SW2 442 aa14.33□□□□□ -0.12
SIN3B-204ENST00000594372 MRVI1Q9Y6F6 885 aa14.33□□□□□ -0.12
SIN3B-204ENST00000594372 B4E1Z4 1266 aa14.32□□□□□ -0.12
SIN3B-204ENST00000594372 H3BQ06 376 aaPredicted RBP14.32□□□□□ -0.12
SIN3B-204ENST00000594372 OPLAHO14841 1288 aa14.32□□□□□ -0.12
SIN3B-204ENST00000594372 CSPG5O95196 566 aa14.32□□□□□ -0.12
SIN3B-204ENST00000594372 CFBP00751 764 aa14.32□□□□□ -0.12
SIN3B-204ENST00000594372 HOXA13P31271 388 aaPredicted RBP14.32□□□□□ -0.12
SIN3B-204ENST00000594372 ERVK-21P61565 698 aa14.32□□□□□ -0.12
SIN3B-204ENST00000594372 DGKDQ16760 1214 aa14.32□□□□□ -0.12
SIN3B-204ENST00000594372 SESTD1Q86VW0 696 aa14.32□□□□□ -0.12
SIN3B-204ENST00000594372 MYOCDQ8IZQ8 938 aa14.32□□□□□ -0.12
SIN3B-204ENST00000594372 STAG2Q8N3U4 1231 aa14.32□□□□□ -0.12
SIN3B-204ENST00000594372 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.32□□□□□ -0.12
SIN3B-204ENST00000594372 NSUN6Q8TEA1 469 aaKnown RBP14.32□□□□□ -0.12
SIN3B-204ENST00000594372 ANKS1AQ92625 1134 aa14.32□□□□□ -0.12
SIN3B-204ENST00000594372 LNPKQ9C0E8 428 aa14.32□□□□□ -0.12
SIN3B-204ENST00000594372 PXMP2Q9NR77 195 aa14.32□□□□□ -0.12
SIN3B-204ENST00000594372 TELO2Q9Y4R8 837 aa14.32□□□□□ -0.12
SIN3B-204ENST00000594372 ABCB11O95342 1321 aa14.32□□□□□ -0.12
SIN3B-204ENST00000594372 PPP1R11O60927 126 aaPredicted RBP14.31□□□□□ -0.12
SIN3B-204ENST00000594372 RGS20O76081 388 aa14.31□□□□□ -0.12
SIN3B-204ENST00000594372 CTSHP09668 335 aa14.31□□□□□ -0.12
SIN3B-204ENST00000594372 SSTR3P32745 418 aaPredicted RBP14.31□□□□□ -0.12
SIN3B-204ENST00000594372 THPOP40225 353 aa14.31□□□□□ -0.12
SIN3B-204ENST00000594372 STXBP2Q15833 593 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms