RNA–Protein interactions for RNA: ENST00000594213.5

GTF2F1-203, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 1,002 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-203ENST00000594213 PARP1P09874 1014 aaKnown RBP18.56■□□□□ 0.56
GTF2F1-203ENST00000594213 HSD17B4P51659 736 aa18.56■□□□□ 0.56
GTF2F1-203ENST00000594213 SEC23AQ15436 765 aa18.56■□□□□ 0.56
GTF2F1-203ENST00000594213 PTGISQ16647 500 aa18.56■□□□□ 0.56
GTF2F1-203ENST00000594213 IMMTQ16891 758 aaKnown RBP18.56■□□□□ 0.56
GTF2F1-203ENST00000594213 STAG2Q8N3U4 1231 aa18.56■□□□□ 0.56
GTF2F1-203ENST00000594213 CAGE1Q8TC20 777 aa18.56■□□□□ 0.56
GTF2F1-203ENST00000594213 KRT23Q9C075 422 aa18.56■□□□□ 0.56
GTF2F1-203ENST00000594213 VAT1LQ9HCJ6 419 aa18.56■□□□□ 0.56
GTF2F1-203ENST00000594213 CTNNA3Q9UI47 895 aa18.56■□□□□ 0.56
GTF2F1-203ENST00000594213 EPOPA6NHQ4 379 aa18.55■□□□□ 0.56
GTF2F1-203ENST00000594213 RFXAPO00287 272 aa18.55■□□□□ 0.56
GTF2F1-203ENST00000594213 PPP1R11O60927 126 aaPredicted RBP18.55■□□□□ 0.56
GTF2F1-203ENST00000594213 NR3C2P08235 984 aa18.55■□□□□ 0.56
GTF2F1-203ENST00000594213 HOXD8P13378 290 aaPredicted RBP18.55■□□□□ 0.56
GTF2F1-203ENST00000594213 CASTP20810 708 aaKnown RBP18.55■□□□□ 0.56
GTF2F1-203ENST00000594213 TAP1Q03518 808 aa18.55■□□□□ 0.56
GTF2F1-203ENST00000594213 SLC35G1Q2M3R5 365 aa18.55■□□□□ 0.56
GTF2F1-203ENST00000594213 HERC6Q8IVU3 1022 aa18.55■□□□□ 0.56
GTF2F1-203ENST00000594213 AFAP1L1Q8TED9 768 aa18.55■□□□□ 0.56
GTF2F1-203ENST00000594213 PXMP2Q9NR77 195 aa18.55■□□□□ 0.56
GTF2F1-203ENST00000594213 MTCH2Q9Y6C9 303 aa18.55■□□□□ 0.56
GTF2F1-203ENST00000594213 HAS3O00219 553 aa18.54■□□□□ 0.56
GTF2F1-203ENST00000594213 RGS20O76081 388 aa18.54■□□□□ 0.56
GTF2F1-203ENST00000594213 BAIAP3O94812 1187 aa18.54■□□□□ 0.56
GTF2F1-203ENST00000594213 EIF2AK2P19525 551 aaKnown RBP18.54■□□□□ 0.56
GTF2F1-203ENST00000594213 DGKDQ16760 1214 aa18.54■□□□□ 0.56
GTF2F1-203ENST00000594213 ARHGEF16Q5VV41 709 aa18.54■□□□□ 0.56
GTF2F1-203ENST00000594213 EXOC6Q8TAG9 804 aa18.54■□□□□ 0.56
GTF2F1-203ENST00000594213 ADAMTS19Q8TE59 1207 aa18.54■□□□□ 0.56
GTF2F1-203ENST00000594213 FTOQ9C0B1 505 aaKnown RBP eCLIP18.54■□□□□ 0.56
GTF2F1-203ENST00000594213 CNNM2Q9H8M5 875 aa18.54■□□□□ 0.56
GTF2F1-203ENST00000594213 GTF2IRD1Q9UHL9 959 aa18.54■□□□□ 0.56
GTF2F1-203ENST00000594213 NOD1Q9Y239 953 aa18.54■□□□□ 0.56
GTF2F1-203ENST00000594213 PRRC2BQ5JSZ5 2229 aaKnown RBP18.53■□□□□ 0.56
GTF2F1-203ENST00000594213 PALM3A6NDB9 673 aaPredicted RBP18.53■□□□□ 0.56
GTF2F1-203ENST00000594213 CXCL10P02778 98 aa18.53■□□□□ 0.56
GTF2F1-203ENST00000594213 BMP1P13497 986 aa18.53■□□□□ 0.56
GTF2F1-203ENST00000594213 SELPP16109 830 aa18.53■□□□□ 0.56
GTF2F1-203ENST00000594213 LAMC2Q13753 1193 aa18.53■□□□□ 0.56
GTF2F1-203ENST00000594213 TRAF7Q6Q0C0 670 aa18.53■□□□□ 0.56
GTF2F1-203ENST00000594213 STOX1Q6ZVD7 989 aa18.53■□□□□ 0.56
GTF2F1-203ENST00000594213 CYB5R4Q7L1T6 521 aa18.53■□□□□ 0.56
GTF2F1-203ENST00000594213 CHST3Q7LGC8 479 aa18.53■□□□□ 0.56
GTF2F1-203ENST00000594213 PPTC7Q8NI37 304 aa18.53■□□□□ 0.56
GTF2F1-203ENST00000594213 AMNQ9BXJ7 453 aa18.53■□□□□ 0.56
GTF2F1-203ENST00000594213 HDAC6Q9UBN7 1215 aa18.53■□□□□ 0.56
GTF2F1-203ENST00000594213 MAD2L2Q9UI95 211 aa18.53■□□□□ 0.56
GTF2F1-203ENST00000594213 TET1Q8NFU7 2136 aa18.53■□□□□ 0.56
GTF2F1-203ENST00000594213 KLRF2D3W0D1 207 aa18.52■□□□□ 0.56
GTF2F1-203ENST00000594213 F2P00734 622 aa18.52■□□□□ 0.56
GTF2F1-203ENST00000594213 CFBP00751 764 aa18.52■□□□□ 0.56
GTF2F1-203ENST00000594213 PSEN2P49810 448 aa18.52■□□□□ 0.56
GTF2F1-203ENST00000594213 CHMP4BP1P59074 171 aa18.52■□□□□ 0.56
GTF2F1-203ENST00000594213 TCTN1Q2MV58 587 aa18.52■□□□□ 0.56
GTF2F1-203ENST00000594213 TRIM71Q2Q1W2 868 aaKnown RBP18.52■□□□□ 0.56
GTF2F1-203ENST00000594213 IFIT1BQ5T764 474 aaKnown RBP18.52■□□□□ 0.56
GTF2F1-203ENST00000594213 VSIG10LQ86VR7 867 aa18.52■□□□□ 0.56
GTF2F1-203ENST00000594213 CCDC155Q8N6L0 562 aa18.52■□□□□ 0.56
GTF2F1-203ENST00000594213 PDCD2LQ9BRP1 358 aa18.52■□□□□ 0.56
GTF2F1-203ENST00000594213 UBAC1Q9BSL1 405 aa18.52■□□□□ 0.56
GTF2F1-203ENST00000594213 CERS4Q9HA82 394 aa18.52■□□□□ 0.56
GTF2F1-203ENST00000594213 MAP3K20Q9NYL2 800 aaKnown RBP18.52■□□□□ 0.56
GTF2F1-203ENST00000594213 SCN5AQ14524 2016 aa18.52■□□□□ 0.55
GTF2F1-203ENST00000594213 KIF28PB7ZC32 967 aa18.51■□□□□ 0.55
GTF2F1-203ENST00000594213 ZBTB5O15062 677 aa18.51■□□□□ 0.55
GTF2F1-203ENST00000594213 DHX16O60231 1041 aaKnown RBP18.51■□□□□ 0.55
GTF2F1-203ENST00000594213 NBNO60934 754 aa18.51■□□□□ 0.55
GTF2F1-203ENST00000594213 PARNO95453 639 aaKnown RBP18.51■□□□□ 0.55
GTF2F1-203ENST00000594213 CKBP12277 381 aa18.51■□□□□ 0.55
GTF2F1-203ENST00000594213 WDR5P61964 334 aaKnown RBP18.51■□□□□ 0.55
GTF2F1-203ENST00000594213 LRRC8DQ7L1W4 858 aa18.51■□□□□ 0.55
GTF2F1-203ENST00000594213 SAMD3Q8N6K7 520 aa18.51■□□□□ 0.55
GTF2F1-203ENST00000594213 UHRF1Q96T88 793 aaPredicted RBP18.51■□□□□ 0.55
GTF2F1-203ENST00000594213 MRVI1Q9Y6F6 885 aa18.51■□□□□ 0.55
GTF2F1-203ENST00000594213 GBF1Q92538 1859 aa18.5■□□□□ 0.55
GTF2F1-203ENST00000594213 LPXNO60711 386 aa18.5■□□□□ 0.55
GTF2F1-203ENST00000594213 PPFIA4O75335 1185 aa18.5■□□□□ 0.55
GTF2F1-203ENST00000594213 PDE4AP27815 886 aa18.5■□□□□ 0.55
GTF2F1-203ENST00000594213 HIC1Q14526 733 aa18.5■□□□□ 0.55
GTF2F1-203ENST00000594213 MFSD10Q14728 455 aa18.5■□□□□ 0.55
GTF2F1-203ENST00000594213 MYSM1Q5VVJ2 828 aa18.5■□□□□ 0.55
GTF2F1-203ENST00000594213 KRT40Q6A162 431 aa18.5■□□□□ 0.55
GTF2F1-203ENST00000594213 SPRED2Q7Z698 418 aa18.5■□□□□ 0.55
GTF2F1-203ENST00000594213 DHX37Q8IY37 1157 aaKnown RBP18.5■□□□□ 0.55
GTF2F1-203ENST00000594213 MICALL1Q8N3F8 863 aa18.5■□□□□ 0.55
GTF2F1-203ENST00000594213 WNT8BQ93098 351 aa18.5■□□□□ 0.55
GTF2F1-203ENST00000594213 TSPYL2Q9H2G4 693 aaPredicted RBP18.5■□□□□ 0.55
GTF2F1-203ENST00000594213 RIOX1Q9H6W3 641 aa18.5■□□□□ 0.55
GTF2F1-203ENST00000594213 PCDHA1Q9Y5I3 950 aa18.5■□□□□ 0.55
GTF2F1-203ENST00000594213 GSPT1P15170 499 aaKnown RBP18.49■□□□□ 0.55
GTF2F1-203ENST00000594213 SP2Q02086 613 aa18.49■□□□□ 0.55
GTF2F1-203ENST00000594213 TFF2Q03403 129 aa18.49■□□□□ 0.55
GTF2F1-203ENST00000594213 PTK7Q13308 1070 aa18.49■□□□□ 0.55
GTF2F1-203ENST00000594213 MBTPS1Q14703 1052 aa18.49■□□□□ 0.55
GTF2F1-203ENST00000594213 KIAA0753Q2KHM9 967 aa18.49■□□□□ 0.55
GTF2F1-203ENST00000594213 CELF3Q5SZQ8 465 aaKnown RBP18.49■□□□□ 0.55
GTF2F1-203ENST00000594213 CNKSR3Q6P9H4 555 aa18.49■□□□□ 0.55
GTF2F1-203ENST00000594213 C7orf31Q8N865 590 aa18.49■□□□□ 0.55
GTF2F1-203ENST00000594213 IL31RAQ8NI17 732 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms