RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 UFL1O94874 794 aa18.3■□□□□ 0.52
LIG1-206ENST00000594067 FAM182BQ5T319 152 aa18.3■□□□□ 0.52
LIG1-206ENST00000594067 GLIS3Q8NEA6 775 aa18.3■□□□□ 0.52
LIG1-206ENST00000594067 TACC1O75410 805 aa18.3■□□□□ 0.52
LIG1-206ENST00000594067 EIF6P56537 245 aaKnown RBP18.3■□□□□ 0.52
LIG1-206ENST00000594067 MAN2A1Q16706 1144 aa18.3■□□□□ 0.52
LIG1-206ENST00000594067 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.3■□□□□ 0.52
LIG1-206ENST00000594067 RRAGAQ7L523 313 aa18.3■□□□□ 0.52
LIG1-206ENST00000594067 KCNK18Q7Z418 384 aa18.3■□□□□ 0.52
LIG1-206ENST00000594067 SELENOOQ9BVL4 669 aa18.3■□□□□ 0.52
LIG1-206ENST00000594067 RIOX1Q9H6W3 641 aa18.3■□□□□ 0.52
LIG1-206ENST00000594067 SH2D4AQ9H788 454 aa18.3■□□□□ 0.52
LIG1-206ENST00000594067 STK17AQ9UEE5 414 aa18.3■□□□□ 0.52
LIG1-206ENST00000594067 SNX12Q9UMY4 172 aa18.3■□□□□ 0.52
LIG1-206ENST00000594067 SBF2Q86WG5 1849 aa18.29■□□□□ 0.52
LIG1-206ENST00000594067 PVALEFA0A1B0GWK0 134 aa18.29■□□□□ 0.52
LIG1-206ENST00000594067 LRRC53A6NM62 1247 aa18.29■□□□□ 0.52
LIG1-206ENST00000594067 AKR1B10O60218 316 aa18.29■□□□□ 0.52
LIG1-206ENST00000594067 PDHBP11177 359 aa18.29■□□□□ 0.52
LIG1-206ENST00000594067 HNRNPH3P31942 346 aaKnown RBP18.29■□□□□ 0.52
LIG1-206ENST00000594067 RHBDL3P58872 404 aa18.29■□□□□ 0.52
LIG1-206ENST00000594067 TMEM266Q2M3C6 531 aa18.29■□□□□ 0.52
LIG1-206ENST00000594067 LRRC47Q8N1G4 583 aaKnown RBP18.29■□□□□ 0.52
LIG1-206ENST00000594067 TRIM58Q8NG06 486 aa18.29■□□□□ 0.52
LIG1-206ENST00000594067 SNX29Q8TEQ0 813 aa18.29■□□□□ 0.52
LIG1-206ENST00000594067 ESYT2A0FGR8 921 aa18.29■□□□□ 0.52
LIG1-206ENST00000594067 SMARCA1P28370 1054 aa18.29■□□□□ 0.52
LIG1-206ENST00000594067 RFC4P35249 363 aa18.29■□□□□ 0.52
LIG1-206ENST00000594067 FXR2P51116 673 aaKnown RBP eCLIP18.29■□□□□ 0.521e-6■■■■□ 25.2
LIG1-206ENST00000594067 ADCY7P51828 1080 aa18.29■□□□□ 0.52
LIG1-206ENST00000594067 EZH2Q15910 746 aaKnown RBP18.29■□□□□ 0.52
LIG1-206ENST00000594067 CREG2Q8IUH2 290 aa18.29■□□□□ 0.52
LIG1-206ENST00000594067 CLEC10AQ8IUN9 316 aa18.29■□□□□ 0.52
LIG1-206ENST00000594067 PLCD3Q8N3E9 789 aa18.29■□□□□ 0.52
LIG1-206ENST00000594067 GUF1Q8N442 669 aaKnown RBP18.29■□□□□ 0.52
LIG1-206ENST00000594067 CCDC155Q8N6L0 562 aa18.29■□□□□ 0.52
LIG1-206ENST00000594067 RAD54LQ92698 747 aa18.29■□□□□ 0.52
LIG1-206ENST00000594067 PSMB7Q99436 277 aa18.29■□□□□ 0.52
LIG1-206ENST00000594067 JRKLQ9Y4A0 524 aa18.29■□□□□ 0.52
LIG1-206ENST00000594067 DDX60LQ5H9U9 1706 aaKnown RBP18.28■□□□□ 0.52
LIG1-206ENST00000594067 MRPS25P82663 173 aaKnown RBP18.28■□□□□ 0.52
LIG1-206ENST00000594067 CNBD1Q8NA66 436 aa18.28■□□□□ 0.52
LIG1-206ENST00000594067 DDX12PQ92771 950 aa18.28■□□□□ 0.52
LIG1-206ENST00000594067 CRACR2AQ9BSW2 395 aa18.28■□□□□ 0.52
LIG1-206ENST00000594067 GPCPD1Q9NPB8 672 aa18.28■□□□□ 0.52
LIG1-206ENST00000594067 ZNF831Q5JPB2 1677 aa18.28■□□□□ 0.52
LIG1-206ENST00000594067 SHOX2O60902 331 aaPredicted RBP18.28■□□□□ 0.52
LIG1-206ENST00000594067 TNNI2P48788 182 aa18.28■□□□□ 0.52
LIG1-206ENST00000594067 ORC2Q13416 577 aaPredicted RBP18.28■□□□□ 0.52
LIG1-206ENST00000594067 MFSD14BQ5SR56 506 aa18.28■□□□□ 0.52
LIG1-206ENST00000594067 FNBP4Q8N3X1 1017 aaPredicted RBP18.28■□□□□ 0.52
LIG1-206ENST00000594067 ANKRD13CQ8N6S4 541 aa18.28■□□□□ 0.52
LIG1-206ENST00000594067 GJA10Q969M2 543 aa18.28■□□□□ 0.52
LIG1-206ENST00000594067 IQCDQ96DY2 449 aa18.28■□□□□ 0.52
LIG1-206ENST00000594067 MATR3P43243 847 aaKnown RBP eCLIP18.27■□□□□ 0.521e-9■■■■■ 38.3
LIG1-206ENST00000594067 UBE2SQ16763 222 aa18.27■□□□□ 0.52
LIG1-206ENST00000594067 TTC31Q49AM3 519 aaPredicted RBP18.27■□□□□ 0.52
LIG1-206ENST00000594067 DNAJC21Q5F1R6 531 aaKnown RBP18.27■□□□□ 0.52
LIG1-206ENST00000594067 KRT79Q5XKE5 535 aa18.27■□□□□ 0.52
LIG1-206ENST00000594067 TANGO6Q9C0B7 1094 aa18.27■□□□□ 0.52
LIG1-206ENST00000594067 SMARCAL1Q9NZC9 954 aa18.27■□□□□ 0.52
LIG1-206ENST00000594067 CXCR5P32302 372 aa18.27■□□□□ 0.52
LIG1-206ENST00000594067 NFRKBQ6P4R8 1299 aa18.27■□□□□ 0.52
LIG1-206ENST00000594067 LRRC55Q6ZSA7 311 aa18.27■□□□□ 0.52
LIG1-206ENST00000594067 HDAC7Q8WUI4 952 aa18.27■□□□□ 0.52
LIG1-206ENST00000594067 PPM1EQ8WY54 764 aa18.27■□□□□ 0.52
LIG1-206ENST00000594067 EHD2Q9NZN4 543 aa18.27■□□□□ 0.52
LIG1-206ENST00000594067 FGFR1OPO95684 399 aaKnown RBP18.26■□□□□ 0.51
LIG1-206ENST00000594067 PLCG2P16885 1265 aa18.26■□□□□ 0.51
LIG1-206ENST00000594067 MAGEA1P43355 309 aa18.26■□□□□ 0.51
LIG1-206ENST00000594067 PICALMQ13492 652 aa18.26■□□□□ 0.51
LIG1-206ENST00000594067 ECM1Q16610 540 aa18.26■□□□□ 0.51
LIG1-206ENST00000594067 IQCEQ6IPM2 695 aa18.26■□□□□ 0.51
LIG1-206ENST00000594067 CCDC84Q86UT8 332 aaPredicted RBP18.26■□□□□ 0.51
LIG1-206ENST00000594067 RPGRQ92834 1020 aaKnown RBP18.26■□□□□ 0.51
LIG1-206ENST00000594067 NCK2O43639 380 aa18.26■□□□□ 0.51
LIG1-206ENST00000594067 LRRC63Q05C16 580 aa18.26■□□□□ 0.51
LIG1-206ENST00000594067 SKIDA1Q1XH10 827 aa18.26■□□□□ 0.51
LIG1-206ENST00000594067 C15orf52Q6ZUT6 534 aaKnown RBP18.26■□□□□ 0.51
LIG1-206ENST00000594067 CERS3Q8IU89 383 aa18.26■□□□□ 0.51
LIG1-206ENST00000594067 AENQ8WTP8 325 aaKnown RBP18.26■□□□□ 0.51
LIG1-206ENST00000594067 BAP1Q92560 729 aa18.26■□□□□ 0.51
LIG1-206ENST00000594067 UIMC1Q96RL1 719 aa18.26■□□□□ 0.51
LIG1-206ENST00000594067 LRRC1Q9BTT6 524 aa18.26■□□□□ 0.51
LIG1-206ENST00000594067 RAB34Q9BZG1 259 aa18.26■□□□□ 0.51
LIG1-206ENST00000594067 MTMR4Q9NYA4 1195 aa18.26■□□□□ 0.51
LIG1-206ENST00000594067 SALL4Q9UJQ4 1053 aa18.26■□□□□ 0.51
LIG1-206ENST00000594067 NOVP48745 357 aa18.26■□□□□ 0.51
LIG1-206ENST00000594067 GFPT1Q06210 699 aaPredicted RBP18.26■□□□□ 0.51
LIG1-206ENST00000594067 CACNA2D4Q7Z3S7 1137 aa18.26■□□□□ 0.51
LIG1-206ENST00000594067 FAM76AQ8TAV0 307 aa18.26■□□□□ 0.51
LIG1-206ENST00000594067 OSBPL9Q96SU4 736 aa18.26■□□□□ 0.51
LIG1-206ENST00000594067 DMGDHQ9UI17 866 aaKnown RBP18.26■□□□□ 0.51
LIG1-206ENST00000594067 GGA1Q9UJY5 639 aa18.26■□□□□ 0.51
LIG1-206ENST00000594067 LCA5LO95447 670 aa18.25■□□□□ 0.51
LIG1-206ENST00000594067 AKR1B1P15121 316 aa18.25■□□□□ 0.51
LIG1-206ENST00000594067 TRAPPC3LQ5T215 181 aa18.25■□□□□ 0.51
LIG1-206ENST00000594067 CCDC70Q6NSX1 233 aa18.25■□□□□ 0.51
LIG1-206ENST00000594067 MMGT1Q8N4V1 131 aa18.25■□□□□ 0.51
LIG1-206ENST00000594067 TSG101Q99816 390 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms