RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 DUSP11O75319 330 aaKnown RBP22.45■■□□□ 1.18
LSM4-203ENST00000593829 EIF3JO75822 258 aaKnown RBP22.45■■□□□ 1.18
LSM4-203ENST00000593829 MYCLP12524 364 aaPredicted RBP22.45■■□□□ 1.18
LSM4-203ENST00000593829 VSIG10LQ86VR7 867 aa22.45■■□□□ 1.18
LSM4-203ENST00000593829 ARRDC4Q8NCT1 418 aa22.45■■□□□ 1.18
LSM4-203ENST00000593829 LENG1Q96BZ8 264 aaPredicted RBP22.45■■□□□ 1.18
LSM4-203ENST00000593829 C6orf50Q9HD87 102 aa22.45■■□□□ 1.18
LSM4-203ENST00000593829 SH2B1Q9NRF2 756 aaPredicted RBP22.45■■□□□ 1.18
LSM4-203ENST00000593829 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.44■■□□□ 1.18
LSM4-203ENST00000593829 RBM47A0AV96 593 aaKnown RBP22.44■■□□□ 1.18
LSM4-203ENST00000593829 FARP2O94887 1054 aaPredicted RBP22.44■■□□□ 1.18
LSM4-203ENST00000593829 CCND2P30279 289 aa22.44■■□□□ 1.18
LSM4-203ENST00000593829 VPS54Q9P1Q0 977 aa22.44■■□□□ 1.18
LSM4-203ENST00000593829 ADCY6O43306 1168 aa22.43■■□□□ 1.18
LSM4-203ENST00000593829 GNA11P29992 359 aa22.43■■□□□ 1.18
LSM4-203ENST00000593829 IL31RAQ8NI17 732 aa22.43■■□□□ 1.18
LSM4-203ENST00000593829 SCFD2Q8WU76 684 aa22.43■■□□□ 1.18
LSM4-203ENST00000593829 WDR11Q9BZH6 1224 aa22.43■■□□□ 1.18
LSM4-203ENST00000593829 FOSP01100 380 aaPredicted RBP22.43■■□□□ 1.18
LSM4-203ENST00000593829 SMPD1P17405 629 aa22.43■■□□□ 1.18
LSM4-203ENST00000593829 NSUN7Q8NE18 718 aaKnown RBP22.43■■□□□ 1.18
LSM4-203ENST00000593829 EHMT1Q9H9B1 1298 aa22.43■■□□□ 1.18
LSM4-203ENST00000593829 ORC3Q9UBD5 711 aaPredicted RBP22.43■■□□□ 1.18
LSM4-203ENST00000593829 PCDHA6Q9UN73 950 aa22.43■■□□□ 1.18
LSM4-203ENST00000593829 PCDHA8Q9Y5H6 950 aa22.43■■□□□ 1.18
LSM4-203ENST00000593829 FRMPD3Q5JV73 1810 aa22.42■■□□□ 1.18
LSM4-203ENST00000593829 ST3GAL1Q11201 340 aa22.42■■□□□ 1.18
LSM4-203ENST00000593829 SEPT14Q6ZU15 432 aa22.42■■□□□ 1.18
LSM4-203ENST00000593829 FAM177A1Q8N128 213 aaPredicted RBP22.42■■□□□ 1.18
LSM4-203ENST00000593829 BICD2Q8TD16 824 aa22.42■■□□□ 1.18
LSM4-203ENST00000593829 GNEQ9Y223 722 aaKnown RBP22.42■■□□□ 1.18
LSM4-203ENST00000593829 PGK1P00558 417 aa22.41■■□□□ 1.18
LSM4-203ENST00000593829 MCM2P49736 904 aa22.41■■□□□ 1.18
LSM4-203ENST00000593829 MNX1P50219 401 aaPredicted RBP22.41■■□□□ 1.18
LSM4-203ENST00000593829 TTLL4Q14679 1199 aa22.41■■□□□ 1.18
LSM4-203ENST00000593829 DUSP28Q4G0W2 176 aa22.41■■□□□ 1.18
LSM4-203ENST00000593829 XRRA1Q6P2D8 792 aa22.41■■□□□ 1.18
LSM4-203ENST00000593829 UBE2Q1Q7Z7E8 422 aa22.41■■□□□ 1.18
LSM4-203ENST00000593829 CCDC83Q8IWF9 413 aa22.41■■□□□ 1.18
LSM4-203ENST00000593829 WASF1Q92558 559 aa22.41■■□□□ 1.18
LSM4-203ENST00000593829 AIFM3Q96NN9 605 aa22.41■■□□□ 1.18
LSM4-203ENST00000593829 SPC25Q9HBM1 224 aa22.41■■□□□ 1.18
LSM4-203ENST00000593829 SYNRGQ9UMZ2 1314 aa22.41■■□□□ 1.18
LSM4-203ENST00000593829 DNM1LO00429 736 aa22.41■■□□□ 1.18
LSM4-203ENST00000593829 DTNBO60941 627 aa22.41■■□□□ 1.18
LSM4-203ENST00000593829 STAM2O75886 525 aa22.41■■□□□ 1.18
LSM4-203ENST00000593829 MYCNP04198 464 aaPredicted RBP22.41■■□□□ 1.18
LSM4-203ENST00000593829 CLK2P49760 499 aaKnown RBP22.41■■□□□ 1.18
LSM4-203ENST00000593829 NLRP5P59047 1200 aa22.41■■□□□ 1.18
LSM4-203ENST00000593829 AP3B2Q13367 1082 aa22.41■■□□□ 1.18
LSM4-203ENST00000593829 LRRC41Q15345 812 aa22.41■■□□□ 1.18
LSM4-203ENST00000593829 PCNX4Q63HM2 1172 aa22.41■■□□□ 1.18
LSM4-203ENST00000593829 RNF180Q86T96 592 aa22.41■■□□□ 1.18
LSM4-203ENST00000593829 PAWRQ96IZ0 340 aaKnown RBP22.41■■□□□ 1.18
LSM4-203ENST00000593829 ADAMTS4O75173 837 aa22.4■■□□□ 1.18
LSM4-203ENST00000593829 GJC2Q5T442 439 aaPredicted RBP22.4■■□□□ 1.18
LSM4-203ENST00000593829 MCTP2Q6DN12 878 aa22.4■■□□□ 1.18
LSM4-203ENST00000593829 NECAB2Q7Z6G3 386 aa22.4■■□□□ 1.18
LSM4-203ENST00000593829 REXO1Q8N1G1 1221 aaKnown RBP22.4■■□□□ 1.18
LSM4-203ENST00000593829 DIS3LQ8TF46 1054 aaKnown RBP22.4■■□□□ 1.18
LSM4-203ENST00000593829 LLPHQ9BRT6 129 aaKnown RBP22.4■■□□□ 1.18
LSM4-203ENST00000593829 TMEM260Q9NX78 707 aa22.4■■□□□ 1.18
LSM4-203ENST00000593829 Q9Y3F1 56 aa22.4■■□□□ 1.18
LSM4-203ENST00000593829 KBTBD13C9JR72 458 aa22.39■■□□□ 1.18
LSM4-203ENST00000593829 NKRFO15226 690 aaKnown RBP eCLIP22.39■■□□□ 1.18
LSM4-203ENST00000593829 TXNP10599 105 aaKnown RBP22.39■■□□□ 1.18
LSM4-203ENST00000593829 FDPSP14324 419 aaKnown RBP22.39■■□□□ 1.18
LSM4-203ENST00000593829 XBP1P17861 261 aa22.39■■□□□ 1.18
LSM4-203ENST00000593829 GJA9P57773 515 aa22.39■■□□□ 1.18
LSM4-203ENST00000593829 MRPS9P82933 396 aaKnown RBP22.39■■□□□ 1.18
LSM4-203ENST00000593829 TMEM63BQ5T3F8 832 aa22.39■■□□□ 1.18
LSM4-203ENST00000593829 TLK2Q86UE8 772 aa22.39■■□□□ 1.18
LSM4-203ENST00000593829 GAS2L3Q86XJ1 694 aa22.39■■□□□ 1.18
LSM4-203ENST00000593829 NAP1L5Q96NT1 182 aaPredicted RBP22.39■■□□□ 1.18
LSM4-203ENST00000593829 ANO3Q9BYT9 981 aa22.39■■□□□ 1.18
LSM4-203ENST00000593829 AP5M1Q9H0R1 490 aa22.39■■□□□ 1.18
LSM4-203ENST00000593829 UPF3AQ9H1J1 476 aaKnown RBP22.39■■□□□ 1.18
LSM4-203ENST00000593829 GOLGA6L22H0YM25 854 aa22.39■■□□□ 1.17
LSM4-203ENST00000593829 JAK2O60674 1132 aa22.39■■□□□ 1.17
LSM4-203ENST00000593829 CD2BP2O95400 341 aaKnown RBP22.39■■□□□ 1.17
LSM4-203ENST00000593829 JAKMIP3Q5VZ66 844 aa22.39■■□□□ 1.17
LSM4-203ENST00000593829 ZFP91Q96JP5 570 aaPredicted RBP22.39■■□□□ 1.17
LSM4-203ENST00000593829 PPP1R9BQ96SB3 815 aa22.39■■□□□ 1.17
LSM4-203ENST00000593829 DYNC1LI2O43237 492 aaPredicted RBP22.38■■□□□ 1.17
LSM4-203ENST00000593829 RGS20O76081 388 aa22.38■■□□□ 1.17
LSM4-203ENST00000593829 C6orf222P0C671 652 aaPredicted RBP22.38■■□□□ 1.17
LSM4-203ENST00000593829 CCDC62Q6P9F0 684 aa22.38■■□□□ 1.17
LSM4-203ENST00000593829 KCNV1Q6PIU1 500 aa22.38■■□□□ 1.17
LSM4-203ENST00000593829 PGBD1Q96JS3 809 aa22.38■■□□□ 1.17
LSM4-203ENST00000593829 ALG1Q9BT22 464 aa22.38■■□□□ 1.17
LSM4-203ENST00000593829 MRVI1Q9Y6F6 885 aa22.38■■□□□ 1.17
LSM4-203ENST00000593829 ARIH2O95376 493 aa22.37■■□□□ 1.17
LSM4-203ENST00000593829 KLHL40Q2TBA0 621 aa22.37■■□□□ 1.17
LSM4-203ENST00000593829 GNPTABQ3T906 1256 aa22.37■■□□□ 1.17
LSM4-203ENST00000593829 GALNT17Q6IS24 598 aa22.37■■□□□ 1.17
LSM4-203ENST00000593829 KLHDC9Q8NEP7 349 aa22.37■■□□□ 1.17
LSM4-203ENST00000593829 C11orf49Q9H6J7 331 aa22.37■■□□□ 1.17
LSM4-203ENST00000593829 RTEL1Q9NZ71 1219 aa22.37■■□□□ 1.17
LSM4-203ENST00000593829 PCDHA4Q9UN74 947 aa22.37■■□□□ 1.17
LSM4-203ENST00000593829 ADAMTS3O15072 1205 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms