RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 ZNF473Q8WTR7 871 aaKnown RBP19.87■□□□□ 0.77
SPC24-206ENST00000592540 ABCB11O95342 1321 aa19.87■□□□□ 0.77
SPC24-206ENST00000592540 SSU72P8A0A1W2PR75 194 aa19.87■□□□□ 0.77
SPC24-206ENST00000592540 STXBP3O00186 592 aa19.87■□□□□ 0.77
SPC24-206ENST00000592540 ATP2B2Q01814 1243 aa19.87■□□□□ 0.77
SPC24-206ENST00000592540 GRM4Q14833 912 aa19.87■□□□□ 0.77
SPC24-206ENST00000592540 SLC35G1Q2M3R5 365 aa19.87■□□□□ 0.77
SPC24-206ENST00000592540 HGSNATQ68CP4 663 aa19.87■□□□□ 0.77
SPC24-206ENST00000592540 ATP8A2Q9NTI2 1148 aa19.87■□□□□ 0.77
SPC24-206ENST00000592540 BARHL2Q9NY43 387 aa19.87■□□□□ 0.77
SPC24-206ENST00000592540 ARPP21Q9UBL0 812 aaPredicted RBP19.87■□□□□ 0.77
SPC24-206ENST00000592540 MAD2L2Q9UI95 211 aa19.87■□□□□ 0.77
SPC24-206ENST00000592540 TAF1P21675 1872 aa19.86■□□□□ 0.77
SPC24-206ENST00000592540 UBE4AQ14139 1066 aa19.86■□□□□ 0.77
SPC24-206ENST00000592540 CAVIN4Q5BKX8 364 aa19.86■□□□□ 0.77
SPC24-206ENST00000592540 C1orf131Q8NDD1 294 aaKnown RBP19.86■□□□□ 0.77
SPC24-206ENST00000592540 CASKIN2Q8WXE0 1202 aa19.86■□□□□ 0.77
SPC24-206ENST00000592540 ATP6V1G3Q96LB4 118 aa19.86■□□□□ 0.77
SPC24-206ENST00000592540 IL17RBQ9NRM6 502 aa19.86■□□□□ 0.77
SPC24-206ENST00000592540 RBAK-RBAKDNI3L0D1 243 aa19.86■□□□□ 0.77
SPC24-206ENST00000592540 GNAQP50148 359 aa19.86■□□□□ 0.77
SPC24-206ENST00000592540 MECOMQ03112 1051 aa19.86■□□□□ 0.77
SPC24-206ENST00000592540 SBK1Q52WX2 424 aa19.86■□□□□ 0.77
SPC24-206ENST00000592540 PARP10Q53GL7 1025 aa19.86■□□□□ 0.77
SPC24-206ENST00000592540 CACNA2D4Q7Z3S7 1137 aa19.86■□□□□ 0.77
SPC24-206ENST00000592540 TMC4Q7Z404 712 aa19.86■□□□□ 0.77
SPC24-206ENST00000592540 DGKHQ86XP1 1220 aa19.86■□□□□ 0.77
SPC24-206ENST00000592540 MMTAG2Q9BU76 263 aaKnown RBP19.86■□□□□ 0.77
SPC24-206ENST00000592540 CYTH3O43739 400 aa19.85■□□□□ 0.77
SPC24-206ENST00000592540 CCNT1O60563 726 aaKnown RBP19.85■□□□□ 0.77
SPC24-206ENST00000592540 NTSR2O95665 410 aa19.85■□□□□ 0.77
SPC24-206ENST00000592540 FGFR1OPO95684 399 aaKnown RBP19.85■□□□□ 0.77
SPC24-206ENST00000592540 MDH1P40925 334 aaKnown RBP19.85■□□□□ 0.77
SPC24-206ENST00000592540 TECP42680 631 aa19.85■□□□□ 0.77
SPC24-206ENST00000592540 SETQ01105 290 aaPredicted RBP19.85■□□□□ 0.77
SPC24-206ENST00000592540 TFAP4Q01664 338 aa19.85■□□□□ 0.77
SPC24-206ENST00000592540 LETM2Q2VYF4 491 aa19.85■□□□□ 0.77
SPC24-206ENST00000592540 NLRP14Q86W24 1093 aa19.85■□□□□ 0.77
SPC24-206ENST00000592540 FAM84BQ96KN1 310 aaPredicted RBP19.85■□□□□ 0.77
SPC24-206ENST00000592540 CCT8L2Q96SF2 557 aa19.85■□□□□ 0.77
SPC24-206ENST00000592540 KRT12Q99456 494 aa19.85■□□□□ 0.77
SPC24-206ENST00000592540 EDEM3Q9BZQ6 932 aa19.85■□□□□ 0.77
SPC24-206ENST00000592540 ABCA3Q99758 1704 aa19.85■□□□□ 0.77
SPC24-206ENST00000592540 ADAMTS2O95450 1211 aa19.85■□□□□ 0.77
SPC24-206ENST00000592540 DDR1Q08345 913 aa19.85■□□□□ 0.77
SPC24-206ENST00000592540 TDRD12Q587J7 1177 aaKnown RBP19.85■□□□□ 0.77
SPC24-206ENST00000592540 BRINP3Q76B58 766 aa19.85■□□□□ 0.77
SPC24-206ENST00000592540 MYCBPAPQ8TBZ2 947 aa19.85■□□□□ 0.77
SPC24-206ENST00000592540 WHAMMQ8TF30 809 aa19.85■□□□□ 0.77
SPC24-206ENST00000592540 GRID2IPA4D2P6 1211 aa19.84■□□□□ 0.77
SPC24-206ENST00000592540 HMGB1P1B2RPK0 211 aaPredicted RBP19.84■□□□□ 0.77
SPC24-206ENST00000592540 PALMO75781 387 aa19.84■□□□□ 0.77
SPC24-206ENST00000592540 MAP2K2P36507 400 aa19.84■□□□□ 0.77
SPC24-206ENST00000592540 DNA2P51530 1060 aa19.84■□□□□ 0.77
SPC24-206ENST00000592540 SEC24CP53992 1094 aa19.84■□□□□ 0.77
SPC24-206ENST00000592540 SV2BQ7L1I2 683 aa19.84■□□□□ 0.77
SPC24-206ENST00000592540 CCDC88AQ3V6T2 1871 aa19.84■□□□□ 0.77
SPC24-206ENST00000592540 ITGB3BPQ13352 177 aaPredicted RBP19.84■□□□□ 0.77
SPC24-206ENST00000592540 TRADDQ15628 312 aa19.84■□□□□ 0.77
SPC24-206ENST00000592540 CDC37Q16543 378 aaPredicted RBP19.84■□□□□ 0.77
SPC24-206ENST00000592540 SLC4A8Q2Y0W8 1093 aa19.84■□□□□ 0.77
SPC24-206ENST00000592540 GUF1Q8N442 669 aaKnown RBP19.84■□□□□ 0.77
SPC24-206ENST00000592540 ANKS1AQ92625 1134 aa19.84■□□□□ 0.77
SPC24-206ENST00000592540 CALML4Q96GE6 196 aa19.84■□□□□ 0.77
SPC24-206ENST00000592540 MYH4Q9Y623 1939 aa19.83■□□□□ 0.77
SPC24-206ENST00000592540 ZPR1O75312 459 aa19.83■□□□□ 0.76
SPC24-206ENST00000592540 FTCDO95954 541 aa19.83■□□□□ 0.76
SPC24-206ENST00000592540 ERCC3P19447 782 aa19.83■□□□□ 0.76
SPC24-206ENST00000592540 HDLBPQ00341 1268 aaKnown RBP19.83■□□□□ 0.76
SPC24-206ENST00000592540 KCNMA1Q12791 1236 aa19.83■□□□□ 0.76
SPC24-206ENST00000592540 TMED8Q6PL24 325 aaPredicted RBP19.83■□□□□ 0.76
SPC24-206ENST00000592540 LRRC55Q6ZSA7 311 aa19.83■□□□□ 0.76
SPC24-206ENST00000592540 UNC13DQ70J99 1090 aa19.83■□□□□ 0.76
SPC24-206ENST00000592540 GGA2Q9UJY4 613 aa19.83■□□□□ 0.76
SPC24-206ENST00000592540 MYMKA6NI61 221 aa19.82■□□□□ 0.76
SPC24-206ENST00000592540 SRRM3A6NNA2 597 aaPredicted RBP19.82■□□□□ 0.76
SPC24-206ENST00000592540 LRRC63Q05C16 580 aa19.82■□□□□ 0.76
SPC24-206ENST00000592540 NAB2Q15742 525 aa19.82■□□□□ 0.76
SPC24-206ENST00000592540 SLC9C1Q4G0N8 1177 aa19.82■□□□□ 0.76
SPC24-206ENST00000592540 RNF187Q5TA31 235 aaPredicted RBP19.82■□□□□ 0.76
SPC24-206ENST00000592540 KRT25Q7Z3Z0 450 aa19.82■□□□□ 0.76
SPC24-206ENST00000592540 INPP4AQ96PE3 977 aaPredicted RBP19.82■□□□□ 0.76
SPC24-206ENST00000592540 A1CFQ9NQ94 594 aaKnown RBP19.82■□□□□ 0.76
SPC24-206ENST00000592540 NIP7Q9Y221 180 aaKnown RBP eCLIP19.82■□□□□ 0.76
SPC24-206ENST00000592540 PLAAQ9Y263 795 aa19.82■□□□□ 0.76
SPC24-206ENST00000592540 PVALEFA0A1B0GWK0 134 aa19.82■□□□□ 0.76
SPC24-206ENST00000592540 FAM107AO95990 144 aa19.82■□□□□ 0.76
SPC24-206ENST00000592540 HSPA9P38646 679 aaKnown RBP19.82■□□□□ 0.76
SPC24-206ENST00000592540 NONOQ15233 471 aaKnown RBP eCLIP19.82■□□□□ 0.76
SPC24-206ENST00000592540 MEI1Q5TIA1 1274 aa19.82■□□□□ 0.76
SPC24-206ENST00000592540 MAATS1Q7Z4T9 603 aa19.82■□□□□ 0.76
SPC24-206ENST00000592540 ZMYND12Q9H0C1 365 aa19.82■□□□□ 0.76
SPC24-206ENST00000592540 CXorf56Q9H5V9 222 aa19.82■□□□□ 0.76
SPC24-206ENST00000592540 VCPKMTQ9H867 229 aa19.82■□□□□ 0.76
SPC24-206ENST00000592540 NLRC4Q9NPP4 1024 aa19.82■□□□□ 0.76
SPC24-206ENST00000592540 BLOC1S4Q9NUP1 217 aa19.82■□□□□ 0.76
SPC24-206ENST00000592540 MCM9Q9NXL9 1143 aa19.82■□□□□ 0.76
SPC24-206ENST00000592540 TLR2O60603 784 aa19.81■□□□□ 0.76
SPC24-206ENST00000592540 USP17L8P0C7I0 530 aa19.81■□□□□ 0.76
SPC24-206ENST00000592540 ACTN3Q08043 901 aaPredicted RBP19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms