RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 TNFRSF8P28908 595 aa12.89□□□□□ -0.35
ZNF540-210ENST00000592533 ZCWPW2Q504Y3 356 aa12.89□□□□□ -0.35
ZNF540-210ENST00000592533 SYN2Q92777 582 aaPredicted RBP12.89□□□□□ -0.35
ZNF540-210ENST00000592533 CAPZA3Q96KX2 299 aa12.89□□□□□ -0.35
ZNF540-210ENST00000592533 PCMTD1Q96MG8 357 aaPredicted RBP12.89□□□□□ -0.35
ZNF540-210ENST00000592533 CD209Q9NNX6 404 aa12.89□□□□□ -0.35
ZNF540-210ENST00000592533 ZNF185O15231 689 aa12.88□□□□□ -0.35
ZNF540-210ENST00000592533 SLC26A4O43511 780 aa12.88□□□□□ -0.35
ZNF540-210ENST00000592533 SLC37A4O43826 429 aa12.88□□□□□ -0.35
ZNF540-210ENST00000592533 PLEKP08567 350 aaPredicted RBP12.88□□□□□ -0.35
ZNF540-210ENST00000592533 TCP1P17987 556 aaKnown RBP12.88□□□□□ -0.35
ZNF540-210ENST00000592533 ADCY7P51828 1080 aa12.88□□□□□ -0.35
ZNF540-210ENST00000592533 HYIQ5T013 277 aa12.88□□□□□ -0.35
ZNF540-210ENST00000592533 SLF2Q8IX21 1173 aa12.88□□□□□ -0.35
ZNF540-210ENST00000592533 CERKQ8TCT0 537 aa12.88□□□□□ -0.35
ZNF540-210ENST00000592533 FAM204AQ9H8W3 233 aa12.88□□□□□ -0.35
ZNF540-210ENST00000592533 BIN2Q9UBW5 565 aaPredicted RBP12.88□□□□□ -0.35
ZNF540-210ENST00000592533 CAPN6Q9Y6Q1 641 aa12.88□□□□□ -0.35
ZNF540-210ENST00000592533 MACROD2A1Z1Q3 448 aa12.88□□□□□ -0.35
ZNF540-210ENST00000592533 USP17L5A8MUK1 530 aa12.88□□□□□ -0.35
ZNF540-210ENST00000592533 TXKP42681 527 aa12.88□□□□□ -0.35
ZNF540-210ENST00000592533 CLK2P49760 499 aaKnown RBP12.88□□□□□ -0.35
ZNF540-210ENST00000592533 CCDC96Q2M329 555 aa12.88□□□□□ -0.35
ZNF540-210ENST00000592533 AMIGO3Q86WK7 504 aa12.88□□□□□ -0.35
ZNF540-210ENST00000592533 C2CD5Q86YS7 1000 aa12.88□□□□□ -0.35
ZNF540-210ENST00000592533 CCDC24Q8N4L8 307 aa12.88□□□□□ -0.35
ZNF540-210ENST00000592533 CAGE1Q8TC20 777 aa12.88□□□□□ -0.35
ZNF540-210ENST00000592533 HPS3Q969F9 1004 aa12.88□□□□□ -0.35
ZNF540-210ENST00000592533 SELENOOQ9BVL4 669 aa12.88□□□□□ -0.35
ZNF540-210ENST00000592533 JADE2Q9NQC1 790 aa12.88□□□□□ -0.35
ZNF540-210ENST00000592533 TMEM260Q9NX78 707 aa12.88□□□□□ -0.35
ZNF540-210ENST00000592533 FAM184BQ9ULE4 1060 aa12.88□□□□□ -0.35
ZNF540-210ENST00000592533 MYO3BQ8WXR4 1341 aa12.88□□□□□ -0.35
ZNF540-210ENST00000592533 EIF4A3P38919 411 aaKnown RBP12.88□□□□□ -0.35
ZNF540-210ENST00000592533 GABPAQ06546 454 aa12.88□□□□□ -0.35
ZNF540-210ENST00000592533 CRY2Q49AN0 593 aa12.88□□□□□ -0.35
ZNF540-210ENST00000592533 CCDC70Q6NSX1 233 aa12.88□□□□□ -0.35
ZNF540-210ENST00000592533 PDXDC1Q6P996 788 aa12.88□□□□□ -0.35
ZNF540-210ENST00000592533 KRT26Q7Z3Y9 468 aa12.88□□□□□ -0.35
ZNF540-210ENST00000592533 RNF10Q8N5U6 811 aaKnown RBP12.88□□□□□ -0.35
ZNF540-210ENST00000592533 EEF2KMTQ96G04 330 aa12.88□□□□□ -0.35
ZNF540-210ENST00000592533 NUCKS1Q9H1E3 243 aaKnown RBP12.88□□□□□ -0.35
ZNF540-210ENST00000592533 SHOX2O60902 331 aaPredicted RBP12.87□□□□□ -0.35
ZNF540-210ENST00000592533 MYBL2P10244 700 aa12.87□□□□□ -0.35
ZNF540-210ENST00000592533 ATP2B4P23634 1241 aa12.87□□□□□ -0.35
ZNF540-210ENST00000592533 MARSP56192 900 aaKnown RBP12.87□□□□□ -0.35
ZNF540-210ENST00000592533 GPSM2P81274 684 aa12.87□□□□□ -0.35
ZNF540-210ENST00000592533 VPS72Q15906 364 aa12.87□□□□□ -0.35
ZNF540-210ENST00000592533 ALS2CR12Q96Q35 445 aa12.87□□□□□ -0.35
ZNF540-210ENST00000592533 MTMR4Q9NYA4 1195 aa12.87□□□□□ -0.35
ZNF540-210ENST00000592533 HYOU1Q9Y4L1 999 aa12.87□□□□□ -0.35
ZNF540-210ENST00000592533 LRRC53A6NM62 1247 aa12.87□□□□□ -0.35
ZNF540-210ENST00000592533 AGPSO00116 658 aa12.87□□□□□ -0.35
ZNF540-210ENST00000592533 CLSTN1O94985 981 aa12.87□□□□□ -0.35
ZNF540-210ENST00000592533 HGSNATQ68CP4 663 aa12.87□□□□□ -0.35
ZNF540-210ENST00000592533 PTF1AQ7RTS3 328 aa12.87□□□□□ -0.35
ZNF540-210ENST00000592533 SRLQ86TD4 932 aa12.87□□□□□ -0.35
ZNF540-210ENST00000592533 SLC51AQ86UW1 340 aa12.87□□□□□ -0.35
ZNF540-210ENST00000592533 AFAP1L1Q8TED9 768 aa12.87□□□□□ -0.35
ZNF540-210ENST00000592533 TBC1D22AQ8WUA7 517 aa12.87□□□□□ -0.35
ZNF540-210ENST00000592533 DNAJC19Q96DA6 116 aa12.87□□□□□ -0.35
ZNF540-210ENST00000592533 OSBPL9Q96SU4 736 aa12.87□□□□□ -0.35
ZNF540-210ENST00000592533 FEZ2Q9UHY8 353 aaPredicted RBP12.87□□□□□ -0.35
ZNF540-210ENST00000592533 MTMR7Q9Y216 660 aa12.87□□□□□ -0.35
ZNF540-210ENST00000592533 C2orf54Q08AI8 447 aa12.86□□□□□ -0.35
ZNF540-210ENST00000592533 SF3B2Q13435 895 aaKnown RBP12.86□□□□□ -0.35
ZNF540-210ENST00000592533 FAM98CQ17RN3 349 aaKnown RBP12.86□□□□□ -0.35
ZNF540-210ENST00000592533 ZC3H3Q8IXZ2 948 aaKnown RBP12.86□□□□□ -0.35
ZNF540-210ENST00000592533 CDK5RAP3Q96JB5 506 aa12.86□□□□□ -0.35
ZNF540-210ENST00000592533 TSG101Q99816 390 aa12.86□□□□□ -0.35
ZNF540-210ENST00000592533 FAM207AQ9NSI2 230 aaPredicted RBP12.86□□□□□ -0.35
ZNF540-210ENST00000592533 PODXL2Q9NZ53 605 aa12.86□□□□□ -0.35
ZNF540-210ENST00000592533 TSKSQ9UJT2 592 aa12.86□□□□□ -0.35
ZNF540-210ENST00000592533 TDP2O95551 362 aa12.86□□□□□ -0.35
ZNF540-210ENST00000592533 TNNT3P45378 269 aaPredicted RBP12.86□□□□□ -0.35
ZNF540-210ENST00000592533 KRT79Q5XKE5 535 aa12.86□□□□□ -0.35
ZNF540-210ENST00000592533 SPATA4Q8NEY3 305 aa12.86□□□□□ -0.35
ZNF540-210ENST00000592533 DDX12PQ92771 950 aa12.86□□□□□ -0.35
ZNF540-210ENST00000592533 CEP63Q96MT8 703 aa12.86□□□□□ -0.35
ZNF540-210ENST00000592533 CEP72Q9P209 647 aa12.86□□□□□ -0.35
ZNF540-210ENST00000592533 GCFC2P16383 781 aaKnown RBP12.86□□□□□ -0.35
ZNF540-210ENST00000592533 LRRC31Q6UY01 552 aa12.86□□□□□ -0.35
ZNF540-210ENST00000592533 CNBD1Q8NA66 436 aa12.86□□□□□ -0.35
ZNF540-210ENST00000592533 SNX29Q8TEQ0 813 aa12.86□□□□□ -0.35
ZNF540-210ENST00000592533 MLXIPQ9HAP2 919 aa12.86□□□□□ -0.35
ZNF540-210ENST00000592533 RNF14Q9UBS8 474 aa12.86□□□□□ -0.35
ZNF540-210ENST00000592533 CCNL1Q9UK58 526 aaPredicted RBP12.86□□□□□ -0.35
ZNF540-210ENST00000592533 PNMA6FA0A0J9YX94 578 aa12.85□□□□□ -0.35
ZNF540-210ENST00000592533 KCNMA1Q12791 1236 aa12.85□□□□□ -0.35
ZNF540-210ENST00000592533 GLE1Q53GS7 698 aaKnown RBP12.85□□□□□ -0.35
ZNF540-210ENST00000592533 KCNK18Q7Z418 384 aa12.85□□□□□ -0.35
ZNF540-210ENST00000592533 SMCR8Q8TEV9 937 aaPredicted RBP12.85□□□□□ -0.35
ZNF540-210ENST00000592533 SH3GL2Q99962 352 aa12.85□□□□□ -0.35
ZNF540-210ENST00000592533 CRACR2AQ9BSW2 395 aa12.85□□□□□ -0.35
ZNF540-210ENST00000592533 UBA5Q9GZZ9 404 aa12.85□□□□□ -0.35
ZNF540-210ENST00000592533 RNF216Q9NWF9 866 aaPredicted RBP12.85□□□□□ -0.35
ZNF540-210ENST00000592533 POTEMA6NI47 508 aa12.85□□□□□ -0.35
ZNF540-210ENST00000592533 MOCS3O95396 460 aa12.85□□□□□ -0.35
ZNF540-210ENST00000592533 GGCXP38435 758 aa12.85□□□□□ -0.35
ZNF540-210ENST00000592533 FKBP3Q00688 224 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms