RNA–Protein interactions for RNA: ENST00000592388.1

VAT1-209, Transcript of vesicle amine transport 1, humanhuman

TSL 5

Gene VAT1, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-209ENST00000592388 OSBP2Q969R2 916 aa8.81□□□□□ -1
VAT1-209ENST00000592388 STRBPQ96SI9 672 aaKnown RBP8.81□□□□□ -1
VAT1-209ENST00000592388 NUP88Q99567 741 aaPredicted RBP8.81□□□□□ -1
VAT1-209ENST00000592388 CHMP4BQ9H444 224 aaKnown RBP8.81□□□□□ -1
VAT1-209ENST00000592388 HOMER2Q9NSB8 354 aa8.81□□□□□ -1
VAT1-209ENST00000592388 CTDP1Q9Y5B0 961 aaPredicted RBP8.81□□□□□ -1
VAT1-209ENST00000592388 ASB14A6NK59 587 aa8.8□□□□□ -1
VAT1-209ENST00000592388 GSG1L2A8MUP6 293 aa8.8□□□□□ -1
VAT1-209ENST00000592388 MINDY4BA8MYZ0 360 aa8.8□□□□□ -1
VAT1-209ENST00000592388 GPAA1O43292 621 aa8.8□□□□□ -1
VAT1-209ENST00000592388 EYA4O95677 639 aa8.8□□□□□ -1
VAT1-209ENST00000592388 CXCL10P02778 98 aa8.8□□□□□ -1
VAT1-209ENST00000592388 HOXB3P14651 431 aaPredicted RBP8.8□□□□□ -1
VAT1-209ENST00000592388 SELPP16109 830 aa8.8□□□□□ -1
VAT1-209ENST00000592388 ICAM3P32942 547 aa8.8□□□□□ -1
VAT1-209ENST00000592388 HTRA4P83105 476 aaPredicted RBP8.8□□□□□ -1
VAT1-209ENST00000592388 PTGISQ16647 500 aa8.8□□□□□ -1
VAT1-209ENST00000592388 PTPN21Q16825 1174 aa8.8□□□□□ -1
VAT1-209ENST00000592388 NFRKBQ6P4R8 1299 aa8.8□□□□□ -1
VAT1-209ENST00000592388 ZBTB33Q86T24 672 aa8.8□□□□□ -1
VAT1-209ENST00000592388 AMOTL1Q8IY63 956 aa8.8□□□□□ -1
VAT1-209ENST00000592388 FAM133AQ8N9E0 248 aa8.8□□□□□ -1
VAT1-209ENST00000592388 CAGE1Q8TC20 777 aa8.8□□□□□ -1
VAT1-209ENST00000592388 SP7Q8TDD2 431 aaPredicted RBP8.8□□□□□ -1
VAT1-209ENST00000592388 APPBP2Q92624 585 aa8.8□□□□□ -1
VAT1-209ENST00000592388 DDRGK1Q96HY6 314 aa8.8□□□□□ -1
VAT1-209ENST00000592388 MSLNLQ96KJ4 702 aa8.8□□□□□ -1
VAT1-209ENST00000592388 CCDC17Q96LX7 622 aa8.8□□□□□ -1
VAT1-209ENST00000592388 SEC62Q99442 399 aaKnown RBP8.8□□□□□ -1
VAT1-209ENST00000592388 HINFPQ9BQA5 517 aa8.8□□□□□ -1
VAT1-209ENST00000592388 DCTPP1Q9H773 170 aa8.8□□□□□ -1
VAT1-209ENST00000592388 DLL3Q9NYJ7 618 aa8.8□□□□□ -1
VAT1-209ENST00000592388 ARPP21Q9UBL0 812 aaPredicted RBP8.8□□□□□ -1
VAT1-209ENST00000592388 PCDHB15Q9Y5E8 787 aa8.8□□□□□ -1
VAT1-209ENST00000592388 PCDHGC5Q9Y5F6 944 aa8.8□□□□□ -1
VAT1-209ENST00000592388 FASNP49327 2511 aaKnown RBP8.8□□□□□ -1
VAT1-209ENST00000592388 GRM6O15303 877 aa8.79□□□□□ -1
VAT1-209ENST00000592388 EFCAB14O75071 495 aa8.79□□□□□ -1
VAT1-209ENST00000592388 ZBED4O75132 1171 aa8.79□□□□□ -1
VAT1-209ENST00000592388 PRDM1O75626 825 aa8.79□□□□□ -1
VAT1-209ENST00000592388 UPP2O95045 317 aa8.79□□□□□ -1
VAT1-209ENST00000592388 RASA1P20936 1047 aa8.79□□□□□ -1
VAT1-209ENST00000592388 CPT1AP50416 773 aa8.79□□□□□ -1
VAT1-209ENST00000592388 ADAM15Q13444 863 aa8.79□□□□□ -1
VAT1-209ENST00000592388 ZSCAN25Q6NSZ9 544 aa8.79□□□□□ -1
VAT1-209ENST00000592388 LRRC47Q8N1G4 583 aaKnown RBP8.79□□□□□ -1
VAT1-209ENST00000592388 CCDC155Q8N6L0 562 aa8.79□□□□□ -1
VAT1-209ENST00000592388 CHST13Q8NET6 341 aa8.79□□□□□ -1
VAT1-209ENST00000592388 CHAMP1Q96JM3 812 aa8.79□□□□□ -1
VAT1-209ENST00000592388 YME1L1Q96TA2 773 aa8.79□□□□□ -1
VAT1-209ENST00000592388 PHF7Q9BWX1 381 aaPredicted RBP8.79□□□□□ -1
VAT1-209ENST00000592388 GOPCQ9HD26 462 aa8.79□□□□□ -1
VAT1-209ENST00000592388 FBXO40Q9UH90 709 aa8.79□□□□□ -1
VAT1-209ENST00000592388 ATP2A1O14983 1001 aa8.78□□□□□ -1
VAT1-209ENST00000592388 RNF113AO15541 343 aaKnown RBP8.78□□□□□ -1
VAT1-209ENST00000592388 NDUFB10O96000 172 aa8.78□□□□□ -1
VAT1-209ENST00000592388 LMNAP02545 664 aaKnown RBP8.78□□□□□ -1
VAT1-209ENST00000592388 AMHP03971 560 aa8.78□□□□□ -1
VAT1-209ENST00000592388 CTNNB1P35222 781 aa8.78□□□□□ -1
VAT1-209ENST00000592388 TDO2P48775 406 aa8.78□□□□□ -1
VAT1-209ENST00000592388 PTPN11Q06124 597 aaPredicted RBP8.78□□□□□ -1
VAT1-209ENST00000592388 RSPO4Q2I0M5 234 aaPredicted RBP8.78□□□□□ -1
VAT1-209ENST00000592388 DUSP28Q4G0W2 176 aa8.78□□□□□ -1
VAT1-209ENST00000592388 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.78□□□□□ -1
VAT1-209ENST00000592388 RASGRP2Q7LDG7 609 aa8.78□□□□□ -1
VAT1-209ENST00000592388 SMRP1Q8NCR6 262 aa8.78□□□□□ -1
VAT1-209ENST00000592388 OR6J1Q8NGC5 347 aa8.78□□□□□ -1
VAT1-209ENST00000592388 PI4K2BQ8TCG2 481 aa8.78□□□□□ -1
VAT1-209ENST00000592388 DHX38Q92620 1227 aaKnown RBP8.78□□□□□ -1
VAT1-209ENST00000592388 KIFC2Q96AC6 838 aa8.78□□□□□ -1
VAT1-209ENST00000592388 CHMP4CQ96CF2 233 aa8.78□□□□□ -1
VAT1-209ENST00000592388 GPATCH3Q96I76 525 aa8.78□□□□□ -1
VAT1-209ENST00000592388 KANSL2Q9H9L4 492 aa8.78□□□□□ -1
VAT1-209ENST00000592388 CLEC1BQ9P126 229 aa8.78□□□□□ -1
VAT1-209ENST00000592388 USP15Q9Y4E8 981 aaPredicted RBP8.78□□□□□ -1
VAT1-209ENST00000592388 SCN10AQ9Y5Y9 1956 aa8.77□□□□□ -1
VAT1-209ENST00000592388 ZNF292O60281 2723 aa8.77□□□□□ -1.01
VAT1-209ENST00000592388 IGKV6D-41A0A0C4DH26 115 aa8.77□□□□□ -1.01
VAT1-209ENST00000592388 PARNO95453 639 aaKnown RBP8.77□□□□□ -1.01
VAT1-209ENST00000592388 CKBP12277 381 aa8.77□□□□□ -1.01
VAT1-209ENST00000592388 SP100P23497 879 aaPredicted RBP8.77□□□□□ -1.01
VAT1-209ENST00000592388 SBK1Q52WX2 424 aa8.77□□□□□ -1.01
VAT1-209ENST00000592388 ASTLQ6HA08 431 aaPredicted RBP8.77□□□□□ -1.01
VAT1-209ENST00000592388 GDF6Q6KF10 455 aaPredicted RBP8.77□□□□□ -1.01
VAT1-209ENST00000592388 PRPF38AQ8NAV1 312 aaKnown RBP8.77□□□□□ -1.01
VAT1-209ENST00000592388 CEP95Q96GE4 821 aa8.77□□□□□ -1.01
VAT1-209ENST00000592388 CTAGE1Q96RT6 745 aa8.77□□□□□ -1.01
VAT1-209ENST00000592388 WDR11Q9BZH6 1224 aa8.77□□□□□ -1.01
VAT1-209ENST00000592388 A1CFQ9NQ94 594 aaKnown RBP8.77□□□□□ -1.01
VAT1-209ENST00000592388 FAM208BQ5VWN6 2430 aa8.76□□□□□ -1.01
VAT1-209ENST00000592388 PLIN4Q96Q06 1357 aa8.76□□□□□ -1.01
VAT1-209ENST00000592388 USP24Q9UPU5 2620 aa8.76□□□□□ -1.01
VAT1-209ENST00000592388 F5H6K3 240 aa8.76□□□□□ -1.01
VAT1-209ENST00000592388 FOXP2O15409 715 aa8.76□□□□□ -1.01
VAT1-209ENST00000592388 LGR5O75473 907 aa8.76□□□□□ -1.01
VAT1-209ENST00000592388 APPP05067 770 aa8.76□□□□□ -1.01
VAT1-209ENST00000592388 KLRC3Q07444 240 aa8.76□□□□□ -1.01
VAT1-209ENST00000592388 COASYQ13057 564 aa8.76□□□□□ -1.01
VAT1-209ENST00000592388 BRDTQ58F21 947 aaPredicted RBP8.76□□□□□ -1.01
VAT1-209ENST00000592388 IFNL3Q8IZI9 196 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms