RNA–Protein interactions for RNA: ENST00000592106.5

VMP1-214, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-214ENST00000592106 UMODL1Q5DID0 1318 aa11.81□□□□□ -0.52
VMP1-214ENST00000592106 A6NJR5 290 aa11.8□□□□□ -0.52
VMP1-214ENST00000592106 BFSP2Q13515 415 aa11.8□□□□□ -0.52
VMP1-214ENST00000592106 SART3Q15020 963 aaKnown RBP11.8□□□□□ -0.52
VMP1-214ENST00000592106 NBPF20Q3BBV1 942 aa11.8□□□□□ -0.52
VMP1-214ENST00000592106 TMEM63BQ5T3F8 832 aa11.8□□□□□ -0.52
VMP1-214ENST00000592106 TTC22Q5TAA0 569 aa11.8□□□□□ -0.52
VMP1-214ENST00000592106 ARHGEF16Q5VV41 709 aa11.8□□□□□ -0.52
VMP1-214ENST00000592106 PDCD7Q8N8D1 485 aaKnown RBP11.8□□□□□ -0.52
VMP1-214ENST00000592106 FBXO22Q8NEZ5 403 aa11.8□□□□□ -0.52
VMP1-214ENST00000592106 SYTL5Q8TDW5 730 aaPredicted RBP11.8□□□□□ -0.52
VMP1-214ENST00000592106 SYMPKQ92797 1274 aaKnown RBP11.8□□□□□ -0.52
VMP1-214ENST00000592106 KATNAL1Q9BW62 490 aa11.8□□□□□ -0.52
VMP1-214ENST00000592106 COL25A1Q9BXS0 654 aaPredicted RBP11.8□□□□□ -0.52
VMP1-214ENST00000592106 WNT8AQ9H1J5 351 aa11.8□□□□□ -0.52
VMP1-214ENST00000592106 CPVLQ9H3G5 476 aa11.8□□□□□ -0.52
VMP1-214ENST00000592106 SLC28A3Q9HAS3 691 aa11.8□□□□□ -0.52
VMP1-214ENST00000592106 TRMT13Q9NUP7 481 aaKnown RBP11.8□□□□□ -0.52
VMP1-214ENST00000592106 MAP3K20Q9NYL2 800 aaKnown RBP11.8□□□□□ -0.52
VMP1-214ENST00000592106 CFBP00751 764 aa11.79□□□□□ -0.52
VMP1-214ENST00000592106 CYP2C9P11712 490 aa11.79□□□□□ -0.52
VMP1-214ENST00000592106 CASTP20810 708 aaKnown RBP11.79□□□□□ -0.52
VMP1-214ENST00000592106 SEPT14Q6ZU15 432 aa11.79□□□□□ -0.52
VMP1-214ENST00000592106 SAMD3Q8N6K7 520 aa11.79□□□□□ -0.52
VMP1-214ENST00000592106 COPS5Q92905 334 aa11.79□□□□□ -0.52
VMP1-214ENST00000592106 SCLYQ96I15 445 aa11.79□□□□□ -0.52
VMP1-214ENST00000592106 RMDN3Q96TC7 470 aa11.79□□□□□ -0.52
VMP1-214ENST00000592106 JMJD4Q9H9V9 463 aa11.79□□□□□ -0.52
VMP1-214ENST00000592106 VAT1LQ9HCJ6 419 aa11.79□□□□□ -0.52
VMP1-214ENST00000592106 MYH6P13533 1939 aa11.79□□□□□ -0.52
VMP1-214ENST00000592106 SCN10AQ9Y5Y9 1956 aa11.79□□□□□ -0.52
VMP1-214ENST00000592106 GRXCR1A8MXD5 290 aa11.78□□□□□ -0.52
VMP1-214ENST00000592106 KLRF2D3W0D1 207 aa11.78□□□□□ -0.52
VMP1-214ENST00000592106 EIF3JO75822 258 aaKnown RBP11.78□□□□□ -0.52
VMP1-214ENST00000592106 MMP3P08254 477 aa11.78□□□□□ -0.52
VMP1-214ENST00000592106 ATP2A2P16615 1042 aaKnown RBP11.78□□□□□ -0.52
VMP1-214ENST00000592106 EIF2AK2P19525 551 aaKnown RBP11.78□□□□□ -0.52
VMP1-214ENST00000592106 PBX2P40425 430 aa11.78□□□□□ -0.52
VMP1-214ENST00000592106 CHMP4BP1P59074 171 aa11.78□□□□□ -0.52
VMP1-214ENST00000592106 DGKDQ16760 1214 aa11.78□□□□□ -0.52
VMP1-214ENST00000592106 PPP2R2DQ66LE6 453 aa11.78□□□□□ -0.52
VMP1-214ENST00000592106 CAGE1Q8TC20 777 aa11.78□□□□□ -0.52
VMP1-214ENST00000592106 TAAR1Q96RJ0 339 aa11.78□□□□□ -0.52
VMP1-214ENST00000592106 SLC9A7Q96T83 725 aa11.78□□□□□ -0.52
VMP1-214ENST00000592106 NKX2-4Q9H2Z4 354 aa11.78□□□□□ -0.52
VMP1-214ENST00000592106 PXMP2Q9NR77 195 aa11.78□□□□□ -0.52
VMP1-214ENST00000592106 CXXC1Q9P0U4 656 aaPredicted RBP11.78□□□□□ -0.52
VMP1-214ENST00000592106 PCDHA11Q9Y5I1 949 aa11.78□□□□□ -0.52
VMP1-214ENST00000592106 MRVI1Q9Y6F6 885 aa11.78□□□□□ -0.52
VMP1-214ENST00000592106 TANC1Q9C0D5 1861 aa11.78□□□□□ -0.52
VMP1-214ENST00000592106 DNAH12Q6ZR08 3092 aa11.78□□□□□ -0.52
VMP1-214ENST00000592106 IFIT3O14879 490 aaKnown RBP11.77□□□□□ -0.53
VMP1-214ENST00000592106 ZBTB5O15062 677 aa11.77□□□□□ -0.53
VMP1-214ENST00000592106 ARIH2O95376 493 aa11.77□□□□□ -0.53
VMP1-214ENST00000592106 PARNO95453 639 aaKnown RBP11.77□□□□□ -0.53
VMP1-214ENST00000592106 GSPT1P15170 499 aaKnown RBP11.77□□□□□ -0.53
VMP1-214ENST00000592106 WTAPQ15007 396 aa11.77□□□□□ -0.53
VMP1-214ENST00000592106 SEC23AQ15436 765 aa11.77□□□□□ -0.53
VMP1-214ENST00000592106 LY6KQ17RY6 165 aa11.77□□□□□ -0.53
VMP1-214ENST00000592106 CCDC62Q6P9F0 684 aa11.77□□□□□ -0.53
VMP1-214ENST00000592106 KCNV1Q6PIU1 500 aa11.77□□□□□ -0.53
VMP1-214ENST00000592106 CHST3Q7LGC8 479 aa11.77□□□□□ -0.53
VMP1-214ENST00000592106 DEFB128Q7Z7B8 93 aa11.77□□□□□ -0.53
VMP1-214ENST00000592106 SESTD1Q86VW0 696 aa11.77□□□□□ -0.53
VMP1-214ENST00000592106 NCOA7Q8NI08 942 aa11.77□□□□□ -0.53
VMP1-214ENST00000592106 AFAP1L1Q8TED9 768 aa11.77□□□□□ -0.53
VMP1-214ENST00000592106 AFG1LQ8WV93 481 aa11.77□□□□□ -0.53
VMP1-214ENST00000592106 FTOQ9C0B1 505 aaKnown RBP eCLIP11.77□□□□□ -0.53
VMP1-214ENST00000592106 PRDM12Q9H4Q4 367 aa11.77□□□□□ -0.53
VMP1-214ENST00000592106 PCDHA1Q9Y5I3 950 aa11.77□□□□□ -0.53
VMP1-214ENST00000592106 KIF28PB7ZC32 967 aa11.76□□□□□ -0.53
VMP1-214ENST00000592106 BAIAP3O94812 1187 aa11.76□□□□□ -0.53
VMP1-214ENST00000592106 NR3C2P08235 984 aa11.76□□□□□ -0.53
VMP1-214ENST00000592106 KCNJ6P48051 423 aa11.76□□□□□ -0.53
VMP1-214ENST00000592106 HSD17B4P51659 736 aa11.76□□□□□ -0.53
VMP1-214ENST00000592106 GHRHRQ02643 423 aa11.76□□□□□ -0.53
VMP1-214ENST00000592106 ARHGAP1Q07960 439 aa11.76□□□□□ -0.53
VMP1-214ENST00000592106 LAMC2Q13753 1193 aa11.76□□□□□ -0.53
VMP1-214ENST00000592106 PTGISQ16647 500 aa11.76□□□□□ -0.53
VMP1-214ENST00000592106 CATIPQ7Z7H3 387 aa11.76□□□□□ -0.53
VMP1-214ENST00000592106 HOMER1Q86YM7 354 aa11.76□□□□□ -0.53
VMP1-214ENST00000592106 DHX37Q8IY37 1157 aaKnown RBP11.76□□□□□ -0.53
VMP1-214ENST00000592106 STAG2Q8N3U4 1231 aa11.76□□□□□ -0.53
VMP1-214ENST00000592106 IL27Q8NEV9 243 aa11.76□□□□□ -0.53
VMP1-214ENST00000592106 TBC1D5Q92609 795 aa11.76□□□□□ -0.53
VMP1-214ENST00000592106 EMID1Q96A84 441 aaPredicted RBP11.76□□□□□ -0.53
VMP1-214ENST00000592106 COL20A1Q9P218 1284 aa11.76□□□□□ -0.53
VMP1-214ENST00000592106 MAD2L2Q9UI95 211 aa11.76□□□□□ -0.53
VMP1-214ENST00000592106 SUPT16HQ9Y5B9 1047 aaKnown RBP11.76□□□□□ -0.53
VMP1-214ENST00000592106 KIAA1217Q5T5P2 1943 aa11.76□□□□□ -0.53
VMP1-214ENST00000592106 PALM3A6NDB9 673 aaPredicted RBP11.75□□□□□ -0.53
VMP1-214ENST00000592106 GCOM1H8Y6P7 765 aaPredicted RBP11.75□□□□□ -0.53
VMP1-214ENST00000592106 CYP21A2P08686 494 aa11.75□□□□□ -0.53
VMP1-214ENST00000592106 IQCF3P0C7M6 154 aa11.75□□□□□ -0.53
VMP1-214ENST00000592106 POLR2MP0CAP2 368 aa11.75□□□□□ -0.53
VMP1-214ENST00000592106 MYCLP12524 364 aaPredicted RBP11.75□□□□□ -0.53
VMP1-214ENST00000592106 IGFBP4P22692 258 aa11.75□□□□□ -0.53
VMP1-214ENST00000592106 CHMLP26374 656 aa11.75□□□□□ -0.53
VMP1-214ENST00000592106 PDE4AP27815 886 aa11.75□□□□□ -0.53
VMP1-214ENST00000592106 CCND2P30279 289 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms