RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 TOMM22Q9NS69 142 aa11.1□□□□□ -0.63
BRCA1-226ENST00000591534 CYP39A1Q9NYL5 469 aa11.1□□□□□ -0.63
BRCA1-226ENST00000591534 ANAPC4Q9UJX5 808 aa11.1□□□□□ -0.63
BRCA1-226ENST00000591534 PRR12Q9ULL5 1215 aa11.1□□□□□ -0.63
BRCA1-226ENST00000591534 GNEQ9Y223 722 aaKnown RBP11.1□□□□□ -0.63
BRCA1-226ENST00000591534 SLC27A5Q9Y2P5 690 aa11.1□□□□□ -0.63
BRCA1-226ENST00000591534 ZNF536O15090 1300 aa11.09□□□□□ -0.63
BRCA1-226ENST00000591534 SOWAHBA6NEL2 793 aa11.09□□□□□ -0.63
BRCA1-226ENST00000591534 ACTN4O43707 911 aaKnown RBP11.09□□□□□ -0.63
BRCA1-226ENST00000591534 ORC4O43929 436 aa11.09□□□□□ -0.63
BRCA1-226ENST00000591534 PFKMP08237 780 aa11.09□□□□□ -0.63
BRCA1-226ENST00000591534 PCP11498 1178 aaKnown RBP11.09□□□□□ -0.63
BRCA1-226ENST00000591534 CYP2C18P33260 490 aa11.09□□□□□ -0.63
BRCA1-226ENST00000591534 BEX3Q00994 111 aa11.09□□□□□ -0.63
BRCA1-226ENST00000591534 RASIP1Q5U651 963 aa11.09□□□□□ -0.63
BRCA1-226ENST00000591534 EXOC6Q8TAG9 804 aa11.09□□□□□ -0.63
BRCA1-226ENST00000591534 LRRN4Q8WUT4 740 aa11.09□□□□□ -0.63
BRCA1-226ENST00000591534 ATXN2LQ8WWM7 1075 aaKnown RBP11.09□□□□□ -0.63
BRCA1-226ENST00000591534 SEC62Q99442 399 aaKnown RBP11.09□□□□□ -0.63
BRCA1-226ENST00000591534 PBX4Q9BYU1 374 aa11.09□□□□□ -0.63
BRCA1-226ENST00000591534 HELLSQ9NRZ9 838 aa11.09□□□□□ -0.63
BRCA1-226ENST00000591534 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.09□□□□□ -0.63
BRCA1-226ENST00000591534 ZNFX1Q9P2E3 1918 aaKnown RBP11.08□□□□□ -0.64
BRCA1-226ENST00000591534 COL11A1P12107 1806 aaPredicted RBP11.08□□□□□ -0.64
BRCA1-226ENST00000591534 PARP14Q460N5 1801 aa11.08□□□□□ -0.64
BRCA1-226ENST00000591534 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.08□□□□□ -0.64
BRCA1-226ENST00000591534 ADCY6O43306 1168 aa11.08□□□□□ -0.64
BRCA1-226ENST00000591534 KPNA6O60684 536 aa11.08□□□□□ -0.64
BRCA1-226ENST00000591534 ACRP10323 421 aa11.08□□□□□ -0.64
BRCA1-226ENST00000591534 TOP1P11387 765 aaKnown RBP11.08□□□□□ -0.64
BRCA1-226ENST00000591534 SMPD1P17405 629 aa11.08□□□□□ -0.64
BRCA1-226ENST00000591534 ABL2P42684 1182 aa11.08□□□□□ -0.64
BRCA1-226ENST00000591534 NT5C2P49902 561 aa11.08□□□□□ -0.64
BRCA1-226ENST00000591534 MFAP1P55081 439 aaKnown RBP11.08□□□□□ -0.64
BRCA1-226ENST00000591534 ALX1Q15699 326 aa11.08□□□□□ -0.64
BRCA1-226ENST00000591534 DUSP28Q4G0W2 176 aa11.08□□□□□ -0.64
BRCA1-226ENST00000591534 C16orf59Q7L2K0 433 aa11.08□□□□□ -0.64
BRCA1-226ENST00000591534 EEPD1Q7L9B9 569 aa11.08□□□□□ -0.64
BRCA1-226ENST00000591534 ANKK1Q8NFD2 765 aa11.08□□□□□ -0.64
BRCA1-226ENST00000591534 PRDM6Q9NQX0 595 aa11.08□□□□□ -0.64
BRCA1-226ENST00000591534 MTMR7Q9Y216 660 aa11.08□□□□□ -0.64
BRCA1-226ENST00000591534 SLC4A7Q9Y6M7 1214 aa11.08□□□□□ -0.64
BRCA1-226ENST00000591534 SALL3Q9BXA9 1300 aa11.08□□□□□ -0.64
BRCA1-226ENST00000591534 GREB1LQ9C091 1923 aaPredicted RBP11.07□□□□□ -0.64
BRCA1-226ENST00000591534 PLXNA1Q9UIW2 1896 aa11.07□□□□□ -0.64
BRCA1-226ENST00000591534 PTPDC1A2A3K4 754 aa11.07□□□□□ -0.64
BRCA1-226ENST00000591534 NKRFO15226 690 aaKnown RBP eCLIP11.07□□□□□ -0.64
BRCA1-226ENST00000591534 CTAGE5O15320 804 aa11.07□□□□□ -0.64
BRCA1-226ENST00000591534 ACTN1P12814 892 aa11.07□□□□□ -0.64
BRCA1-226ENST00000591534 IRX6P78412 446 aaPredicted RBP11.07□□□□□ -0.64
BRCA1-226ENST00000591534 MCMDC2Q4G0Z9 681 aa11.07□□□□□ -0.64
BRCA1-226ENST00000591534 MUM1L1Q5H9M0 696 aa11.07□□□□□ -0.64
BRCA1-226ENST00000591534 SYDE2Q5VT97 1194 aa11.07□□□□□ -0.64
BRCA1-226ENST00000591534 TAPT1Q6NXT6 567 aa11.07□□□□□ -0.64
BRCA1-226ENST00000591534 BTNL9Q6UXG8 535 aa11.07□□□□□ -0.64
BRCA1-226ENST00000591534 FBXO16Q8IX29 292 aaPredicted RBP11.07□□□□□ -0.64
BRCA1-226ENST00000591534 MORC4Q8TE76 937 aa11.07□□□□□ -0.64
BRCA1-226ENST00000591534 CHMP4CQ96CF2 233 aa11.07□□□□□ -0.64
BRCA1-226ENST00000591534 TTC14Q96N46 770 aa11.07□□□□□ -0.64
BRCA1-226ENST00000591534 WDR11Q9BZH6 1224 aa11.07□□□□□ -0.64
BRCA1-226ENST00000591534 MAF1Q9H063 256 aa11.07□□□□□ -0.64
BRCA1-226ENST00000591534 RANBP17Q9H2T7 1088 aaKnown RBP11.07□□□□□ -0.64
BRCA1-226ENST00000591534 RWDD1Q9H446 243 aaPredicted RBP11.07□□□□□ -0.64
BRCA1-226ENST00000591534 RNF41Q9H4P4 317 aaPredicted RBP11.07□□□□□ -0.64
BRCA1-226ENST00000591534 IL17RBQ9NRM6 502 aa11.07□□□□□ -0.64
BRCA1-226ENST00000591534 TCP11L1Q9NUJ3 509 aa11.07□□□□□ -0.64
BRCA1-226ENST00000591534 SMCHD1A6NHR9 2005 aa11.07□□□□□ -0.64
BRCA1-226ENST00000591534 EYSQ5T1H1 3165 aa11.07□□□□□ -0.64
BRCA1-226ENST00000591534 ZBBXA8MT70 800 aa11.06□□□□□ -0.64
BRCA1-226ENST00000591534 TNFRSF10AO00220 468 aa11.06□□□□□ -0.64
BRCA1-226ENST00000591534 B4GALT4O60513 344 aa11.06□□□□□ -0.64
BRCA1-226ENST00000591534 IGHDP01880 384 aa11.06□□□□□ -0.64
BRCA1-226ENST00000591534 FGRP09769 529 aa11.06□□□□□ -0.64
BRCA1-226ENST00000591534 IGFBP4P22692 258 aa11.06□□□□□ -0.64
BRCA1-226ENST00000591534 RFC2P35250 354 aa11.06□□□□□ -0.64
BRCA1-226ENST00000591534 NOVP48745 357 aa11.06□□□□□ -0.64
BRCA1-226ENST00000591534 ALDH5A1P51649 535 aaPredicted RBP11.06□□□□□ -0.64
BRCA1-226ENST00000591534 CCL23P55773 120 aa11.06□□□□□ -0.64
BRCA1-226ENST00000591534 MRPS5P82675 430 aaKnown RBP11.06□□□□□ -0.64
BRCA1-226ENST00000591534 BAATQ14032 418 aaPredicted RBP11.06□□□□□ -0.64
BRCA1-226ENST00000591534 CCDC178Q5BJE1 867 aa11.06□□□□□ -0.64
BRCA1-226ENST00000591534 RRP12Q5JTH9 1297 aaKnown RBP11.06□□□□□ -0.64
BRCA1-226ENST00000591534 ANKRD45Q5TZF3 282 aa11.06□□□□□ -0.64
BRCA1-226ENST00000591534 RNF207Q6ZRF8 634 aa11.06□□□□□ -0.64
BRCA1-226ENST00000591534 OTOP2Q7RTS6 562 aa11.06□□□□□ -0.64
BRCA1-226ENST00000591534 CCDC82Q8N4S0 544 aa11.06□□□□□ -0.64
BRCA1-226ENST00000591534 RETREG2Q8NC44 543 aa11.06□□□□□ -0.64
BRCA1-226ENST00000591534 DNERQ8NFT8 737 aa11.06□□□□□ -0.64
BRCA1-226ENST00000591534 PRR7Q8TB68 274 aa11.06□□□□□ -0.64
BRCA1-226ENST00000591534 PPM1EQ8WY54 764 aa11.06□□□□□ -0.64
BRCA1-226ENST00000591534 WNT2BQ93097 391 aa11.06□□□□□ -0.64
BRCA1-226ENST00000591534 MTG1Q9BT17 334 aaPredicted RBP11.06□□□□□ -0.64
BRCA1-226ENST00000591534 NOC4LQ9BVI4 516 aaKnown RBP11.06□□□□□ -0.64
BRCA1-226ENST00000591534 TRPV6Q9H1D0 765 aa11.06□□□□□ -0.64
BRCA1-226ENST00000591534 ALDH8A1Q9H2A2 487 aaPredicted RBP11.06□□□□□ -0.64
BRCA1-226ENST00000591534 PRDM12Q9H4Q4 367 aa11.06□□□□□ -0.64
BRCA1-226ENST00000591534 PDGFCQ9NRA1 345 aa11.06□□□□□ -0.64
BRCA1-226ENST00000591534 THEGQ9P2T0 379 aa11.06□□□□□ -0.64
BRCA1-226ENST00000591534 PCDHA11Q9Y5I1 949 aa11.06□□□□□ -0.64
BRCA1-226ENST00000591534 VCANP13611 3396 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms