RNA–Protein interactions for RNA: ENST00000590247.6

PDCD5-207, Transcript of programmed cell death 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD5, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD5-207ENST00000590247 HOMER1Q86YM7 354 aa22.28■■□□□ 1.16
PDCD5-207ENST00000590247 MYLIPQ8WY64 445 aa22.28■■□□□ 1.16
PDCD5-207ENST00000590247 HERVK_113Q902F9 699 aa22.28■■□□□ 1.16
PDCD5-207ENST00000590247 VWCEQ96DN2 955 aa22.28■■□□□ 1.16
PDCD5-207ENST00000590247 PXMP2Q9NR77 195 aa22.28■■□□□ 1.16
PDCD5-207ENST00000590247 TRMT13Q9NUP7 481 aaKnown RBP22.28■■□□□ 1.16
PDCD5-207ENST00000590247 MYO9BQ13459 2157 aa22.28■■□□□ 1.16
PDCD5-207ENST00000590247 EIF3JO75822 258 aaKnown RBP22.27■■□□□ 1.16
PDCD5-207ENST00000590247 CALM1P0DP23 149 aa22.27■■□□□ 1.16
PDCD5-207ENST00000590247 CALM2P0DP24 149 aa22.27■■□□□ 1.16
PDCD5-207ENST00000590247 CALM3P0DP25 149 aa22.27■■□□□ 1.16
PDCD5-207ENST00000590247 NBPF20Q3BBV1 942 aa22.27■■□□□ 1.16
PDCD5-207ENST00000590247 TSGA10IPQ3SY00 556 aa22.27■■□□□ 1.16
PDCD5-207ENST00000590247 SKAP1Q86WV1 359 aa22.27■■□□□ 1.16
PDCD5-207ENST00000590247 GPHNQ9NQX3 736 aaPredicted RBP22.27■■□□□ 1.16
PDCD5-207ENST00000590247 CCDC69A6NI79 296 aa22.26■■□□□ 1.15
PDCD5-207ENST00000590247 GRXCR1A8MXD5 290 aa22.26■■□□□ 1.15
PDCD5-207ENST00000590247 NR3C2P08235 984 aa22.26■■□□□ 1.15
PDCD5-207ENST00000590247 SUPT20HL2P0C7V6 817 aa22.26■■□□□ 1.15
PDCD5-207ENST00000590247 LY6KQ17RY6 165 aa22.26■■□□□ 1.15
PDCD5-207ENST00000590247 SEPT14Q6ZU15 432 aa22.26■■□□□ 1.15
PDCD5-207ENST00000590247 SGMS1Q86VZ5 419 aa22.26■■□□□ 1.15
PDCD5-207ENST00000590247 CXXC1Q9P0U4 656 aaPredicted RBP22.26■■□□□ 1.15
PDCD5-207ENST00000590247 TRIP12Q14669 1992 aaPredicted RBP22.26■■□□□ 1.15
PDCD5-207ENST00000590247 GCOM1H8Y6P7 765 aaPredicted RBP22.25■■□□□ 1.15
PDCD5-207ENST00000590247 DLL1O00548 723 aa22.25■■□□□ 1.15
PDCD5-207ENST00000590247 FGBP02675 491 aa22.25■■□□□ 1.15
PDCD5-207ENST00000590247 POLR2MP0CAP2 368 aa22.25■■□□□ 1.15
PDCD5-207ENST00000590247 CYP2C9P11712 490 aa22.25■■□□□ 1.15
PDCD5-207ENST00000590247 EIF2AK2P19525 551 aaKnown RBP22.25■■□□□ 1.15
PDCD5-207ENST00000590247 PBX2P40425 430 aa22.25■■□□□ 1.15
PDCD5-207ENST00000590247 ARHGAP1Q07960 439 aa22.25■■□□□ 1.15
PDCD5-207ENST00000590247 NFRKBQ6P4R8 1299 aa22.25■■□□□ 1.15
PDCD5-207ENST00000590247 NFXL1Q6ZNB6 911 aa22.25■■□□□ 1.15
PDCD5-207ENST00000590247 PPP1R13LQ8WUF5 828 aa22.25■■□□□ 1.15
PDCD5-207ENST00000590247 SCLYQ96I15 445 aa22.25■■□□□ 1.15
PDCD5-207ENST00000590247 PDCD2LQ9BRP1 358 aa22.25■■□□□ 1.15
PDCD5-207ENST00000590247 PBX4Q9BYU1 374 aa22.25■■□□□ 1.15
PDCD5-207ENST00000590247 TANC1Q9C0D5 1861 aa22.24■■□□□ 1.15
PDCD5-207ENST00000590247 GH1P01241 217 aa22.24■■□□□ 1.15
PDCD5-207ENST00000590247 GRIN2CQ14957 1233 aa22.24■■□□□ 1.15
PDCD5-207ENST00000590247 KCNV1Q6PIU1 500 aa22.24■■□□□ 1.15
PDCD5-207ENST00000590247 AFG1LQ8WV93 481 aa22.24■■□□□ 1.15
PDCD5-207ENST00000590247 TIFAQ96CG3 184 aa22.24■■□□□ 1.15
PDCD5-207ENST00000590247 RRP36Q96EU6 259 aaKnown RBP22.24■■□□□ 1.15
PDCD5-207ENST00000590247 DDX41Q9UJV9 622 aaKnown RBP22.24■■□□□ 1.15
PDCD5-207ENST00000590247 MMP3P08254 477 aa22.23■■□□□ 1.15
PDCD5-207ENST00000590247 PTPN11Q06124 597 aaPredicted RBP22.23■■□□□ 1.15
PDCD5-207ENST00000590247 KRT32Q14532 448 aa22.23■■□□□ 1.15
PDCD5-207ENST00000590247 FAM47CQ5HY64 1035 aa22.23■■□□□ 1.15
PDCD5-207ENST00000590247 OTOP2Q7RTS6 562 aa22.23■■□□□ 1.15
PDCD5-207ENST00000590247 VSIG10LQ86VR7 867 aa22.23■■□□□ 1.15
PDCD5-207ENST00000590247 RPUSD2Q8IZ73 545 aaKnown RBP22.23■■□□□ 1.15
PDCD5-207ENST00000590247 MAFAQ8NHW3 353 aaPredicted RBP22.23■■□□□ 1.15
PDCD5-207ENST00000590247 EMID1Q96A84 441 aaPredicted RBP22.23■■□□□ 1.15
PDCD5-207ENST00000590247 NEK1Q96PY6 1258 aa22.23■■□□□ 1.15
PDCD5-207ENST00000590247 MYL10Q9BUA6 226 aa22.23■■□□□ 1.15
PDCD5-207ENST00000590247 ZNF576Q9H609 170 aa22.23■■□□□ 1.15
PDCD5-207ENST00000590247 SEC63Q9UGP8 760 aaKnown RBP22.23■■□□□ 1.15
PDCD5-207ENST00000590247 SLC12A7Q9Y666 1083 aa22.23■■□□□ 1.15
PDCD5-207ENST00000590247 TET1Q8NFU7 2136 aa22.22■■□□□ 1.15
PDCD5-207ENST00000590247 PRUNE2Q8WUY3 3088 aa22.22■■□□□ 1.15
PDCD5-207ENST00000590247 RGS20O76081 388 aa22.22■■□□□ 1.15
PDCD5-207ENST00000590247 PGM5Q15124 567 aa22.22■■□□□ 1.15
PDCD5-207ENST00000590247 KAT2BQ92831 832 aa22.22■■□□□ 1.15
PDCD5-207ENST00000590247 FRMPD4Q14CM0 1322 aa22.22■■□□□ 1.15
PDCD5-207ENST00000590247 TGFB3P10600 412 aa22.21■■□□□ 1.15
PDCD5-207ENST00000590247 FOSL2P15408 326 aa22.21■■□□□ 1.15
PDCD5-207ENST00000590247 HOXA13P31271 388 aaPredicted RBP22.21■■□□□ 1.15
PDCD5-207ENST00000590247 COL9A3Q14050 684 aaPredicted RBP22.21■■□□□ 1.15
PDCD5-207ENST00000590247 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.21■■□□□ 1.15
PDCD5-207ENST00000590247 MTIF3Q9H2K0 278 aaKnown RBP22.21■■□□□ 1.15
PDCD5-207ENST00000590247 PIK3CDO00329 1044 aa22.2■■□□□ 1.14
PDCD5-207ENST00000590247 STAM2O75886 525 aa22.2■■□□□ 1.14
PDCD5-207ENST00000590247 HMGB1P09429 215 aaKnown RBP22.2■■□□□ 1.14
PDCD5-207ENST00000590247 EXOSC10Q01780 885 aaKnown RBP22.2■■□□□ 1.14
PDCD5-207ENST00000590247 DHX32Q7L7V1 743 aaKnown RBP22.2■■□□□ 1.14
PDCD5-207ENST00000590247 FANCBQ8NB91 859 aa22.2■■□□□ 1.14
PDCD5-207ENST00000590247 CTAGE1Q96RT6 745 aa22.2■■□□□ 1.14
PDCD5-207ENST00000590247 MRVI1Q9Y6F6 885 aa22.2■■□□□ 1.14
PDCD5-207ENST00000590247 NEFLP07196 543 aa22.19■■□□□ 1.14
PDCD5-207ENST00000590247 CASTP20810 708 aaKnown RBP22.19■■□□□ 1.14
PDCD5-207ENST00000590247 CCND2P30279 289 aa22.19■■□□□ 1.14
PDCD5-207ENST00000590247 LAMC2Q13753 1193 aa22.19■■□□□ 1.14
PDCD5-207ENST00000590247 SYNE3Q6ZMZ3 975 aa22.19■■□□□ 1.14
PDCD5-207ENST00000590247 SESTD1Q86VW0 696 aa22.19■■□□□ 1.14
PDCD5-207ENST00000590247 SRBD1Q8N5C6 995 aaKnown RBP22.19■■□□□ 1.14
PDCD5-207ENST00000590247 IL31RAQ8NI17 732 aa22.19■■□□□ 1.14
PDCD5-207ENST00000590247 PITPNM1O00562 1244 aa22.18■■□□□ 1.14
PDCD5-207ENST00000590247 PLEKHA8P1O95397 391 aa22.18■■□□□ 1.14
PDCD5-207ENST00000590247 PFKMP08237 780 aa22.18■■□□□ 1.14
PDCD5-207ENST00000590247 MYCLP12524 364 aaPredicted RBP22.18■■□□□ 1.14
PDCD5-207ENST00000590247 RAB30Q15771 203 aa22.18■■□□□ 1.14
PDCD5-207ENST00000590247 DGKDQ16760 1214 aa22.18■■□□□ 1.14
PDCD5-207ENST00000590247 APOA5Q6Q788 366 aa22.18■■□□□ 1.14
PDCD5-207ENST00000590247 TMTC3Q6ZXV5 915 aa22.18■■□□□ 1.14
PDCD5-207ENST00000590247 RASEFQ8IZ41 740 aa22.18■■□□□ 1.14
PDCD5-207ENST00000590247 KCNB2Q92953 911 aa22.18■■□□□ 1.14
PDCD5-207ENST00000590247 CHD9Q3L8U1 2897 aa22.18■■□□□ 1.14
PDCD5-207ENST00000590247 CUL9Q8IWT3 2517 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms