RNA–Protein interactions for RNA: ENST00000589828.1

VAT1-207, Transcript of vesicle amine transport 1, humanhuman

TSL 2

Gene VAT1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-207ENST00000589828 INCENPQ9NQS7 918 aa9.44□□□□□ -0.9
VAT1-207ENST00000589828 IL17RBQ9NRM6 502 aa9.44□□□□□ -0.9
VAT1-207ENST00000589828 PRKAG3Q9UGI9 489 aa9.44□□□□□ -0.9
VAT1-207ENST00000589828 SCN10AQ9Y5Y9 1956 aa9.44□□□□□ -0.9
VAT1-207ENST00000589828 LOC102724159A0A0B4J2E5 919 aa9.43□□□□□ -0.9
VAT1-207ENST00000589828 PTPDC1A2A3K4 754 aa9.43□□□□□ -0.9
VAT1-207ENST00000589828 GPAA1O43292 621 aa9.43□□□□□ -0.9
VAT1-207ENST00000589828 GALR2O43603 387 aaPredicted RBP9.43□□□□□ -0.9
VAT1-207ENST00000589828 ST18O60284 1047 aa9.43□□□□□ -0.9
VAT1-207ENST00000589828 NMT2O60551 498 aa9.43□□□□□ -0.9
VAT1-207ENST00000589828 LGR5O75473 907 aa9.43□□□□□ -0.9
VAT1-207ENST00000589828 MMP3P08254 477 aa9.43□□□□□ -0.9
VAT1-207ENST00000589828 TXNP10599 105 aaKnown RBP9.43□□□□□ -0.9
VAT1-207ENST00000589828 CALML3P27482 149 aa9.43□□□□□ -0.9
VAT1-207ENST00000589828 TDO2P48775 406 aa9.43□□□□□ -0.9
VAT1-207ENST00000589828 CLCN6P51797 869 aa9.43□□□□□ -0.9
VAT1-207ENST00000589828 IKBKEQ14164 716 aa9.43□□□□□ -0.9
VAT1-207ENST00000589828 HIC1Q14526 733 aa9.43□□□□□ -0.9
VAT1-207ENST00000589828 PWP2Q15269 919 aaKnown RBP9.43□□□□□ -0.9
VAT1-207ENST00000589828 CLUL1Q15846 466 aa9.43□□□□□ -0.9
VAT1-207ENST00000589828 TIGD5Q53EQ6 642 aa9.43□□□□□ -0.9
VAT1-207ENST00000589828 BRDTQ58F21 947 aaPredicted RBP9.43□□□□□ -0.9
VAT1-207ENST00000589828 HERC4Q5GLZ8 1057 aaPredicted RBP9.43□□□□□ -0.9
VAT1-207ENST00000589828 ZNF618Q5T7W0 954 aa9.43□□□□□ -0.9
VAT1-207ENST00000589828 ZSCAN25Q6NSZ9 544 aa9.43□□□□□ -0.9
VAT1-207ENST00000589828 CCDC62Q6P9F0 684 aa9.43□□□□□ -0.9
VAT1-207ENST00000589828 RPAINQ86UA6 219 aa9.43□□□□□ -0.9
VAT1-207ENST00000589828 IFNL3Q8IZI9 196 aa9.43□□□□□ -0.9
VAT1-207ENST00000589828 CCDC155Q8N6L0 562 aa9.43□□□□□ -0.9
VAT1-207ENST00000589828 DBF4BQ8NFT6 615 aa9.43□□□□□ -0.9
VAT1-207ENST00000589828 SCFD2Q8WU76 684 aa9.43□□□□□ -0.9
VAT1-207ENST00000589828 APPBP2Q92624 585 aa9.43□□□□□ -0.9
VAT1-207ENST00000589828 OSBPL7Q9BZF2 842 aa9.43□□□□□ -0.9
VAT1-207ENST00000589828 CLDND1Q9NY35 253 aa9.43□□□□□ -0.9
VAT1-207ENST00000589828 HDAC6Q9UBN7 1215 aa9.43□□□□□ -0.9
VAT1-207ENST00000589828 ADD3Q9UEY8 706 aaKnown RBP9.43□□□□□ -0.9
VAT1-207ENST00000589828 MTMR7Q9Y216 660 aa9.43□□□□□ -0.9
VAT1-207ENST00000589828 INSL6Q9Y581 213 aa9.43□□□□□ -0.9
VAT1-207ENST00000589828 PTPRSQ13332 1948 aa9.43□□□□□ -0.9
VAT1-207ENST00000589828 RAD50Q92878 1312 aa9.42□□□□□ -0.9
VAT1-207ENST00000589828 H3BNC9 293 aa9.42□□□□□ -0.9
VAT1-207ENST00000589828 RAB11FIP3O75154 756 aa9.42□□□□□ -0.9
VAT1-207ENST00000589828 GABBR2O75899 941 aa9.42□□□□□ -0.9
VAT1-207ENST00000589828 RPS6P62753 249 aaKnown RBP9.42□□□□□ -0.9
VAT1-207ENST00000589828 ARHGAP1Q07960 439 aa9.42□□□□□ -0.9
VAT1-207ENST00000589828 PDE4DQ08499 809 aa9.42□□□□□ -0.9
VAT1-207ENST00000589828 PDAP1Q13442 181 aaKnown RBP9.42□□□□□ -0.9
VAT1-207ENST00000589828 GPM6BQ13491 265 aa9.42□□□□□ -0.9
VAT1-207ENST00000589828 SMAD2Q15796 467 aaKnown RBP9.42□□□□□ -0.9
VAT1-207ENST00000589828 PTPROQ16827 1216 aa9.42□□□□□ -0.9
VAT1-207ENST00000589828 LY6KQ17RY6 165 aa9.42□□□□□ -0.9
VAT1-207ENST00000589828 CTC1Q2NKJ3 1217 aa9.42□□□□□ -0.9
VAT1-207ENST00000589828 BTNL9Q6UXG8 535 aa9.42□□□□□ -0.9
VAT1-207ENST00000589828 RNF135Q8IUD6 432 aa9.42□□□□□ -0.9
VAT1-207ENST00000589828 MYOCDQ8IZQ8 938 aa9.42□□□□□ -0.9
VAT1-207ENST00000589828 KBTBD3Q8NAB2 608 aa9.42□□□□□ -0.9
VAT1-207ENST00000589828 UPF3BQ9BZI7 483 aaKnown RBP9.42□□□□□ -0.9
VAT1-207ENST00000589828 FAM86C1Q9NVL1 165 aa9.42□□□□□ -0.9
VAT1-207ENST00000589828 GTF2IRD1Q9UHL9 959 aa9.42□□□□□ -0.9
VAT1-207ENST00000589828 CTNNA3Q9UI47 895 aa9.42□□□□□ -0.9
VAT1-207ENST00000589828 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.42□□□□□ -0.9
VAT1-207ENST00000589828 ZNF318Q5VUA4 2279 aa9.42□□□□□ -0.9
VAT1-207ENST00000589828 LCTP09848 1927 aa9.41□□□□□ -0.9
VAT1-207ENST00000589828 PATL2C9JE40 543 aaKnown RBP9.41□□□□□ -0.9
VAT1-207ENST00000589828 RNF113AO15541 343 aaKnown RBP9.41□□□□□ -0.9
VAT1-207ENST00000589828 MBTPS2O43462 519 aa9.41□□□□□ -0.9
VAT1-207ENST00000589828 SMARCA5O60264 1052 aaPredicted RBP9.41□□□□□ -0.9
VAT1-207ENST00000589828 EFCAB14O75071 495 aa9.41□□□□□ -0.9
VAT1-207ENST00000589828 PARNO95453 639 aaKnown RBP9.41□□□□□ -0.9
VAT1-207ENST00000589828 APPP05067 770 aa9.41□□□□□ -0.9
VAT1-207ENST00000589828 GTF2F1P35269 517 aaKnown RBP eCLIP9.41□□□□□ -0.9
VAT1-207ENST00000589828 NOVP48745 357 aa9.41□□□□□ -0.9
VAT1-207ENST00000589828 PSEN2P49810 448 aa9.41□□□□□ -0.9
VAT1-207ENST00000589828 PTPN5P54829 565 aa9.41□□□□□ -0.9
VAT1-207ENST00000589828 PDE4BQ07343 736 aa9.41□□□□□ -0.9
VAT1-207ENST00000589828 HYAL1Q12794 435 aa9.41□□□□□ -0.9
VAT1-207ENST00000589828 PTK7Q13308 1070 aa9.41□□□□□ -0.9
VAT1-207ENST00000589828 CCDC96Q2M329 555 aa9.41□□□□□ -0.9
VAT1-207ENST00000589828 SYDE2Q5VT97 1194 aa9.41□□□□□ -0.9
VAT1-207ENST00000589828 BMP8AQ7Z5Y6 402 aa9.41□□□□□ -0.9
VAT1-207ENST00000589828 TMEM192Q8IY95 271 aa9.41□□□□□ -0.9
VAT1-207ENST00000589828 EDAQ92838 391 aa9.41□□□□□ -0.9
VAT1-207ENST00000589828 SEC62Q99442 399 aaKnown RBP9.41□□□□□ -0.9
VAT1-207ENST00000589828 ALG1Q9BT22 464 aa9.41□□□□□ -0.9
VAT1-207ENST00000589828 NSUN3Q9H649 340 aaKnown RBP9.41□□□□□ -0.9
VAT1-207ENST00000589828 ZNF287Q9HBT7 754 aa9.41□□□□□ -0.9
VAT1-207ENST00000589828 STX8Q9UNK0 236 aa9.41□□□□□ -0.9
VAT1-207ENST00000589828 MYH8P13535 1937 aa9.41□□□□□ -0.9
VAT1-207ENST00000589828 FRMPD2Q68DX3 1309 aaPredicted RBP9.4□□□□□ -0.9
VAT1-207ENST00000589828 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.4□□□□□ -0.9
VAT1-207ENST00000589828 TMEM221A6NGB7 291 aa9.4□□□□□ -0.9
VAT1-207ENST00000589828 M0R296 226 aa9.4□□□□□ -0.9
VAT1-207ENST00000589828 HAS3O00219 553 aa9.4□□□□□ -0.9
VAT1-207ENST00000589828 FOXP2O15409 715 aa9.4□□□□□ -0.9
VAT1-207ENST00000589828 LINC00271P0C7V0 271 aa9.4□□□□□ -0.9
VAT1-207ENST00000589828 PSEN1P49768 467 aa9.4□□□□□ -0.9
VAT1-207ENST00000589828 PPARAQ07869 468 aa9.4□□□□□ -0.9
VAT1-207ENST00000589828 TSHZ3Q63HK5 1081 aa9.4□□□□□ -0.9
VAT1-207ENST00000589828 RNF207Q6ZRF8 634 aa9.4□□□□□ -0.9
VAT1-207ENST00000589828 TRIM67Q6ZTA4 783 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms