RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 BRAPQ7Z569 592 aa15.51■□□□□ 0.07
VMP1-210ENST00000589823 NEK8Q86SG6 692 aa15.51■□□□□ 0.07
VMP1-210ENST00000589823 FERMT3Q86UX7 667 aa15.51■□□□□ 0.07
VMP1-210ENST00000589823 NAP1L4Q99733 375 aaKnown RBP15.51■□□□□ 0.07
VMP1-210ENST00000589823 ABHD16BQ9H3Z7 469 aa15.51■□□□□ 0.07
VMP1-210ENST00000589823 ZSCAN16Q9H4T2 348 aaPredicted RBP15.51■□□□□ 0.07
VMP1-210ENST00000589823 VTA1Q9NP79 307 aa15.51■□□□□ 0.07
VMP1-210ENST00000589823 FAM205CA6NFA0 338 aa15.5■□□□□ 0.07
VMP1-210ENST00000589823 SNAI1O95863 264 aaPredicted RBP15.5■□□□□ 0.07
VMP1-210ENST00000589823 ZSCAN22P10073 491 aaPredicted RBP15.5■□□□□ 0.07
VMP1-210ENST00000589823 ACVR2BQ13705 512 aa15.5■□□□□ 0.07
VMP1-210ENST00000589823 LETM2Q2VYF4 491 aa15.5■□□□□ 0.07
VMP1-210ENST00000589823 GNPTABQ3T906 1256 aa15.5■□□□□ 0.07
VMP1-210ENST00000589823 SLC9C1Q4G0N8 1177 aa15.5■□□□□ 0.07
VMP1-210ENST00000589823 NLRX1Q86UT6 975 aa15.5■□□□□ 0.07
VMP1-210ENST00000589823 FBXO16Q8IX29 292 aaPredicted RBP15.5■□□□□ 0.07
VMP1-210ENST00000589823 RTEL1Q9NZ71 1219 aa15.5■□□□□ 0.07
VMP1-210ENST00000589823 NRBP1Q9UHY1 535 aa15.5■□□□□ 0.07
VMP1-210ENST00000589823 ZHX1Q9UKY1 873 aaPredicted RBP15.5■□□□□ 0.07
VMP1-210ENST00000589823 DDX49Q9Y6V7 483 aaKnown RBP15.5■□□□□ 0.07
VMP1-210ENST00000589823 IGHA2P01877 340 aa15.49■□□□□ 0.07
VMP1-210ENST00000589823 INHAP05111 366 aa15.49■□□□□ 0.07
VMP1-210ENST00000589823 GCFC2P16383 781 aaKnown RBP15.49■□□□□ 0.07
VMP1-210ENST00000589823 NUCB2P80303 420 aa15.49■□□□□ 0.07
VMP1-210ENST00000589823 MRPS9P82933 396 aaKnown RBP15.49■□□□□ 0.07
VMP1-210ENST00000589823 RESTQ13127 1097 aa15.49■□□□□ 0.07
VMP1-210ENST00000589823 CEP55Q53EZ4 464 aa15.49■□□□□ 0.07
VMP1-210ENST00000589823 FOXD4L5Q5VV16 416 aaPredicted RBP15.49■□□□□ 0.07
VMP1-210ENST00000589823 MOXD1Q6UVY6 613 aa15.49■□□□□ 0.07
VMP1-210ENST00000589823 CRYGNQ8WXF5 182 aa15.49■□□□□ 0.07
VMP1-210ENST00000589823 FOXD4L4Q8WXT5 416 aaPredicted RBP15.49■□□□□ 0.07
VMP1-210ENST00000589823 ZFP91Q96JP5 570 aaPredicted RBP15.49■□□□□ 0.07
VMP1-210ENST00000589823 INPP4AQ96PE3 977 aaPredicted RBP15.49■□□□□ 0.07
VMP1-210ENST00000589823 MXRA8Q9BRK3 442 aa15.49■□□□□ 0.07
VMP1-210ENST00000589823 CCNT1O60563 726 aaKnown RBP15.48■□□□□ 0.07
VMP1-210ENST00000589823 F13A1P00488 732 aa15.48■□□□□ 0.07
VMP1-210ENST00000589823 PRKAR2AP13861 404 aaKnown RBP15.48■□□□□ 0.07
VMP1-210ENST00000589823 ATP2B1P20020 1258 aa15.48■□□□□ 0.07
VMP1-210ENST00000589823 CIITAP33076 1130 aa15.48■□□□□ 0.07
VMP1-210ENST00000589823 TRAPPC10P48553 1259 aa15.48■□□□□ 0.07
VMP1-210ENST00000589823 CACNB2Q08289 660 aaPredicted RBP15.48■□□□□ 0.07
VMP1-210ENST00000589823 TRIM32Q13049 653 aa15.48■□□□□ 0.07
VMP1-210ENST00000589823 PKP1Q13835 747 aa15.48■□□□□ 0.07
VMP1-210ENST00000589823 RILPL1Q5EBL4 403 aa15.48■□□□□ 0.07
VMP1-210ENST00000589823 PRAMEF19Q5SWL8 479 aa15.48■□□□□ 0.07
VMP1-210ENST00000589823 SEPT14Q6ZU15 432 aa15.48■□□□□ 0.07
VMP1-210ENST00000589823 NIPA1Q7RTP0 329 aa15.48■□□□□ 0.07
VMP1-210ENST00000589823 SH3TC2Q8TF17 1288 aa15.48■□□□□ 0.07
VMP1-210ENST00000589823 GPRASP2Q96D09 838 aa15.48■□□□□ 0.07
VMP1-210ENST00000589823 CDHR1Q96JP9 859 aa15.48■□□□□ 0.07
VMP1-210ENST00000589823 JADE2Q9NQC1 790 aa15.48■□□□□ 0.07
VMP1-210ENST00000589823 CIZ1Q9ULV3 898 aaPredicted RBP15.48■□□□□ 0.07
VMP1-210ENST00000589823 UBIAD1Q9Y5Z9 338 aa15.48■□□□□ 0.07
VMP1-210ENST00000589823 FIBPO43427 364 aa15.47■□□□□ 0.07
VMP1-210ENST00000589823 BRD1O95696 1058 aa15.47■□□□□ 0.07
VMP1-210ENST00000589823 ITGB5P18084 799 aa15.47■□□□□ 0.07
VMP1-210ENST00000589823 CNGA1P29973 690 aa15.47■□□□□ 0.07
VMP1-210ENST00000589823 DDIT3P35638 169 aa15.47■□□□□ 0.07
VMP1-210ENST00000589823 SETQ01105 290 aaPredicted RBP15.47■□□□□ 0.07
VMP1-210ENST00000589823 MTMR1Q13613 665 aa15.47■□□□□ 0.07
VMP1-210ENST00000589823 PRR16Q569H4 304 aa15.47■□□□□ 0.07
VMP1-210ENST00000589823 TTC38Q5R3I4 469 aa15.47■□□□□ 0.07
VMP1-210ENST00000589823 MYSM1Q5VVJ2 828 aa15.47■□□□□ 0.07
VMP1-210ENST00000589823 PPP4R3AQ6IN85 833 aa15.47■□□□□ 0.07
VMP1-210ENST00000589823 KCNV1Q6PIU1 500 aa15.47■□□□□ 0.07
VMP1-210ENST00000589823 PLA2G4DQ86XP0 818 aa15.47■□□□□ 0.07
VMP1-210ENST00000589823 SCFD2Q8WU76 684 aa15.47■□□□□ 0.07
VMP1-210ENST00000589823 KATNBL1Q9H079 304 aa15.47■□□□□ 0.07
VMP1-210ENST00000589823 DDX25Q9UHL0 483 aaKnown RBP15.47■□□□□ 0.07
VMP1-210ENST00000589823 FAM184BQ9ULE4 1060 aa15.47■□□□□ 0.07
VMP1-210ENST00000589823 MRVI1Q9Y6F6 885 aa15.47■□□□□ 0.07
VMP1-210ENST00000589823 CYP3A7-CYP3A51PA0A087WV96 503 aa15.46■□□□□ 0.07
VMP1-210ENST00000589823 FAM86B1E9PN63 330 aa15.46■□□□□ 0.07
VMP1-210ENST00000589823 MEIS1O00470 390 aa15.46■□□□□ 0.07
VMP1-210ENST00000589823 MAFGO15525 162 aa15.46■□□□□ 0.07
VMP1-210ENST00000589823 RGS20O76081 388 aa15.46■□□□□ 0.07
VMP1-210ENST00000589823 TDP2O95551 362 aa15.46■□□□□ 0.07
VMP1-210ENST00000589823 FAM86B2P0C5J1 330 aa15.46■□□□□ 0.07
VMP1-210ENST00000589823 ZNF865P0CJ78 1059 aaPredicted RBP15.46■□□□□ 0.07
VMP1-210ENST00000589823 TGFB3P10600 412 aa15.46■□□□□ 0.07
VMP1-210ENST00000589823 CYBAP13498 195 aa15.46■□□□□ 0.07
VMP1-210ENST00000589823 CYP3A7P24462 503 aa15.46■□□□□ 0.07
VMP1-210ENST00000589823 TTLL4Q14679 1199 aa15.46■□□□□ 0.07
VMP1-210ENST00000589823 MAP3K21Q5TCX8 1036 aa15.46■□□□□ 0.07
VMP1-210ENST00000589823 IQSEC1Q6DN90 963 aa15.46■□□□□ 0.07
VMP1-210ENST00000589823 TAPT1Q6NXT6 567 aa15.46■□□□□ 0.07
VMP1-210ENST00000589823 WDR11Q9BZH6 1224 aa15.46■□□□□ 0.07
VMP1-210ENST00000589823 HMX1Q9NP08 348 aaPredicted RBP15.46■□□□□ 0.07
VMP1-210ENST00000589823 PDGFCQ9NRA1 345 aa15.46■□□□□ 0.07
VMP1-210ENST00000589823 LRRC37A2A6NM11 1700 aa15.46■□□□□ 0.06
VMP1-210ENST00000589823 MYH7BA7E2Y1 1941 aa15.45■□□□□ 0.06
VMP1-210ENST00000589823 IGLV3-22A0A075B6J6 115 aa15.45■□□□□ 0.06
VMP1-210ENST00000589823 RBM47A0AV96 593 aaKnown RBP15.45■□□□□ 0.06
VMP1-210ENST00000589823 SPATA31C2B4DYI2 1134 aa15.45■□□□□ 0.06
VMP1-210ENST00000589823 EDIL3O43854 480 aa15.45■□□□□ 0.06
VMP1-210ENST00000589823 MARCH6O60337 910 aa15.45■□□□□ 0.06
VMP1-210ENST00000589823 TXNP10599 105 aaKnown RBP15.45■□□□□ 0.06
VMP1-210ENST00000589823 AKR1A1P14550 325 aa15.45■□□□□ 0.06
VMP1-210ENST00000589823 ICAM3P32942 547 aa15.45■□□□□ 0.06
VMP1-210ENST00000589823 MCM7P33993 719 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms