RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 LAMC2Q13753 1193 aa14.18□□□□□ -0.14
VAT1-206ENST00000589709 KCNV1Q6PIU1 500 aa14.18□□□□□ -0.14
VAT1-206ENST00000589709 OTOP2Q7RTS6 562 aa14.18□□□□□ -0.14
VAT1-206ENST00000589709 CATIPQ7Z7H3 387 aa14.18□□□□□ -0.14
VAT1-206ENST00000589709 VSIG10LQ86VR7 867 aa14.18□□□□□ -0.14
VAT1-206ENST00000589709 MB21D2Q8IYB1 491 aaPredicted RBP14.18□□□□□ -0.14
VAT1-206ENST00000589709 SCLYQ96I15 445 aa14.18□□□□□ -0.14
VAT1-206ENST00000589709 PIGSQ96S52 555 aa14.18□□□□□ -0.14
VAT1-206ENST00000589709 MAP3K14Q99558 947 aa14.18□□□□□ -0.14
VAT1-206ENST00000589709 PDCD2LQ9BRP1 358 aa14.18□□□□□ -0.14
VAT1-206ENST00000589709 SENP2Q9HC62 589 aa14.18□□□□□ -0.14
VAT1-206ENST00000589709 MSRAQ9UJ68 235 aa14.18□□□□□ -0.14
VAT1-206ENST00000589709 GCOM1H8Y6P7 765 aaPredicted RBP14.17□□□□□ -0.14
VAT1-206ENST00000589709 POLR2MP0CAP2 368 aa14.17□□□□□ -0.14
VAT1-206ENST00000589709 SMARCA1P28370 1054 aa14.17□□□□□ -0.14
VAT1-206ENST00000589709 ANTXR2P58335 489 aa14.17□□□□□ -0.14
VAT1-206ENST00000589709 BFSP2Q13515 415 aa14.17□□□□□ -0.14
VAT1-206ENST00000589709 DGKDQ16760 1214 aa14.17□□□□□ -0.14
VAT1-206ENST00000589709 TMEM67Q5HYA8 995 aa14.17□□□□□ -0.14
VAT1-206ENST00000589709 RETREG2Q8NC44 543 aa14.17□□□□□ -0.14
VAT1-206ENST00000589709 KAT2BQ92831 832 aa14.17□□□□□ -0.14
VAT1-206ENST00000589709 RBM8AQ9Y5S9 174 aaKnown RBP14.17□□□□□ -0.14
VAT1-206ENST00000589709 MRVI1Q9Y6F6 885 aa14.17□□□□□ -0.14
VAT1-206ENST00000589709 SLC4A7Q9Y6M7 1214 aa14.17□□□□□ -0.14
VAT1-206ENST00000589709 MYH6P13533 1939 aa14.16□□□□□ -0.14
VAT1-206ENST00000589709 PPFIA4O75335 1185 aa14.16□□□□□ -0.14
VAT1-206ENST00000589709 RGS20O76081 388 aa14.16□□□□□ -0.14
VAT1-206ENST00000589709 IQCF3P0C7M6 154 aa14.16□□□□□ -0.14
VAT1-206ENST00000589709 TGFB3P10600 412 aa14.16□□□□□ -0.14
VAT1-206ENST00000589709 HOXD8P13378 290 aaPredicted RBP14.16□□□□□ -0.14
VAT1-206ENST00000589709 HOXA13P31271 388 aaPredicted RBP14.16□□□□□ -0.14
VAT1-206ENST00000589709 CHST3Q7LGC8 479 aa14.16□□□□□ -0.14
VAT1-206ENST00000589709 HOMER1Q86YM7 354 aa14.16□□□□□ -0.14
VAT1-206ENST00000589709 PPTC7Q8NI37 304 aa14.16□□□□□ -0.14
VAT1-206ENST00000589709 NOD1Q9Y239 953 aa14.16□□□□□ -0.14
VAT1-206ENST00000589709 MYCLP12524 364 aaPredicted RBP14.15□□□□□ -0.14
VAT1-206ENST00000589709 ACTN1P12814 892 aa14.15□□□□□ -0.14
VAT1-206ENST00000589709 PGM5Q15124 567 aa14.15□□□□□ -0.14
VAT1-206ENST00000589709 PTGISQ16647 500 aa14.15□□□□□ -0.14
VAT1-206ENST00000589709 MYSM1Q5VVJ2 828 aa14.15□□□□□ -0.14
VAT1-206ENST00000589709 DHX37Q8IY37 1157 aaKnown RBP14.15□□□□□ -0.14
VAT1-206ENST00000589709 TMTC2Q8N394 836 aa14.15□□□□□ -0.14
VAT1-206ENST00000589709 CAGE1Q8TC20 777 aa14.15□□□□□ -0.14
VAT1-206ENST00000589709 CTAGE1Q96RT6 745 aa14.15□□□□□ -0.14
VAT1-206ENST00000589709 LZTS2Q9BRK4 669 aa14.15□□□□□ -0.14
VAT1-206ENST00000589709 KATNAL1Q9BW62 490 aa14.15□□□□□ -0.14
VAT1-206ENST00000589709 LSG1Q9H089 658 aaKnown RBP14.15□□□□□ -0.14
VAT1-206ENST00000589709 LY9Q9HBG7 655 aa14.15□□□□□ -0.14
VAT1-206ENST00000589709 PCDHA11Q9Y5I1 949 aa14.15□□□□□ -0.14
VAT1-206ENST00000589709 CHD9Q3L8U1 2897 aa14.15□□□□□ -0.14
VAT1-206ENST00000589709 KIAA1217Q5T5P2 1943 aa14.14□□□□□ -0.15
VAT1-206ENST00000589709 HAS3O00219 553 aa14.14□□□□□ -0.15
VAT1-206ENST00000589709 DDAH1O94760 285 aa14.14□□□□□ -0.15
VAT1-206ENST00000589709 F2P00734 622 aa14.14□□□□□ -0.15
VAT1-206ENST00000589709 ATP2A2P16615 1042 aaKnown RBP14.14□□□□□ -0.15
VAT1-206ENST00000589709 CCND2P30279 289 aa14.14□□□□□ -0.15
VAT1-206ENST00000589709 KIF5BP33176 963 aa14.14□□□□□ -0.15
VAT1-206ENST00000589709 MCM5P33992 734 aa14.14□□□□□ -0.15
VAT1-206ENST00000589709 RBL2Q08999 1139 aa14.14□□□□□ -0.15
VAT1-206ENST00000589709 CELF3Q5SZQ8 465 aaKnown RBP14.14□□□□□ -0.15
VAT1-206ENST00000589709 GDF6Q6KF10 455 aaPredicted RBP14.14□□□□□ -0.15
VAT1-206ENST00000589709 DEFB128Q7Z7B8 93 aa14.14□□□□□ -0.15
VAT1-206ENST00000589709 ZNF654Q8IZM8 581 aa14.14□□□□□ -0.15
VAT1-206ENST00000589709 CCDC155Q8N6L0 562 aa14.14□□□□□ -0.15
VAT1-206ENST00000589709 IL31RAQ8NI17 732 aa14.14□□□□□ -0.15
VAT1-206ENST00000589709 CTCFLQ8NI51 663 aaPredicted RBP14.14□□□□□ -0.15
VAT1-206ENST00000589709 PHOSPHO2Q8TCD6 241 aa14.14□□□□□ -0.15
VAT1-206ENST00000589709 AFAP1L1Q8TED9 768 aa14.14□□□□□ -0.15
VAT1-206ENST00000589709 PPP1R13LQ8WUF5 828 aa14.14□□□□□ -0.15
VAT1-206ENST00000589709 TMEM87BQ96K49 555 aa14.14□□□□□ -0.15
VAT1-206ENST00000589709 GAS2L1Q99501 681 aaPredicted RBP14.14□□□□□ -0.15
VAT1-206ENST00000589709 SPZ1Q9BXG8 430 aa14.14□□□□□ -0.15
VAT1-206ENST00000589709 COL25A1Q9BXS0 654 aaPredicted RBP14.14□□□□□ -0.15
VAT1-206ENST00000589709 SLC28A3Q9HAS3 691 aa14.14□□□□□ -0.15
VAT1-206ENST00000589709 GTF2IRD1Q9UHL9 959 aa14.14□□□□□ -0.15
VAT1-206ENST00000589709 YBX2Q9Y2T7 364 aaKnown RBP14.14□□□□□ -0.15
VAT1-206ENST00000589709 ZBBXA8MT70 800 aa14.13□□□□□ -0.15
VAT1-206ENST00000589709 PRC1O43663 620 aa14.13□□□□□ -0.15
VAT1-206ENST00000589709 STAM2O75886 525 aa14.13□□□□□ -0.15
VAT1-206ENST00000589709 PARNO95453 639 aaKnown RBP14.13□□□□□ -0.15
VAT1-206ENST00000589709 LIFRP42702 1097 aa14.13□□□□□ -0.15
VAT1-206ENST00000589709 PSEN2P49810 448 aa14.13□□□□□ -0.15
VAT1-206ENST00000589709 GNAQP50148 359 aa14.13□□□□□ -0.15
VAT1-206ENST00000589709 CHMP4BP1P59074 171 aa14.13□□□□□ -0.15
VAT1-206ENST00000589709 CASC1Q6TDU7 716 aa14.13□□□□□ -0.15
VAT1-206ENST00000589709 FCHSD1Q86WN1 690 aa14.13□□□□□ -0.15
VAT1-206ENST00000589709 C7orf31Q8N865 590 aa14.13□□□□□ -0.15
VAT1-206ENST00000589709 ESYT1Q9BSJ8 1104 aa14.13□□□□□ -0.15
VAT1-206ENST00000589709 NKX2-4Q9H2Z4 354 aa14.13□□□□□ -0.15
VAT1-206ENST00000589709 PRDM12Q9H4Q4 367 aa14.13□□□□□ -0.15
VAT1-206ENST00000589709 HDAC6Q9UBN7 1215 aa14.13□□□□□ -0.15
VAT1-206ENST00000589709 BAZ2BQ9UIF8 2168 aaKnown RBP14.13□□□□□ -0.15
VAT1-206ENST00000589709 FRMPD4Q14CM0 1322 aa14.13□□□□□ -0.15
VAT1-206ENST00000589709 UNC80Q8N2C7 3258 aa14.12□□□□□ -0.15
VAT1-206ENST00000589709 GGPS1O95749 300 aa14.12□□□□□ -0.15
VAT1-206ENST00000589709 SELPP16109 830 aa14.12□□□□□ -0.15
VAT1-206ENST00000589709 ICAM3P32942 547 aa14.12□□□□□ -0.15
VAT1-206ENST00000589709 SP2Q02086 613 aa14.12□□□□□ -0.15
VAT1-206ENST00000589709 MFSD10Q14728 455 aa14.12□□□□□ -0.15
VAT1-206ENST00000589709 NECTIN1Q15223 517 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms