RNA–Protein interactions for RNA: ENST00000589064.5

MBD3-205, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 1,475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-205ENST00000589064 HMGB1P09429 215 aaKnown RBP23.94■■□□□ 1.42
MBD3-205ENST00000589064 C9orf50Q5SZB4 431 aa23.94■■□□□ 1.42
MBD3-205ENST00000589064 AFG1LQ8WV93 481 aa23.94■■□□□ 1.42
MBD3-205ENST00000589064 MTG1Q9BT17 334 aaPredicted RBP23.94■■□□□ 1.42
MBD3-205ENST00000589064 RGS20O76081 388 aa23.94■■□□□ 1.42
MBD3-205ENST00000589064 EPHB4P54760 987 aa23.94■■□□□ 1.42
MBD3-205ENST00000589064 USP17L6PQ6QN14 398 aa23.94■■□□□ 1.42
MBD3-205ENST00000589064 JAKMIP1Q96N16 626 aaKnown RBP23.94■■□□□ 1.42
MBD3-205ENST00000589064 SEZ6LQ9BYH1 1024 aa23.94■■□□□ 1.42
MBD3-205ENST00000589064 TRPV6Q9H1D0 765 aa23.94■■□□□ 1.42
MBD3-205ENST00000589064 MRVI1Q9Y6F6 885 aa23.94■■□□□ 1.42
MBD3-205ENST00000589064 BAZ2BQ9UIF8 2168 aaKnown RBP23.93■■□□□ 1.42
MBD3-205ENST00000589064 ZBTB43O43298 467 aa23.93■■□□□ 1.42
MBD3-205ENST00000589064 KPNA6O60684 536 aa23.93■■□□□ 1.42
MBD3-205ENST00000589064 CENPBP07199 599 aaPredicted RBP23.93■■□□□ 1.42
MBD3-205ENST00000589064 CCND2P30279 289 aa23.93■■□□□ 1.42
MBD3-205ENST00000589064 ARHGAP1Q07960 439 aa23.93■■□□□ 1.42
MBD3-205ENST00000589064 PPP1R12CQ9BZL4 782 aa23.93■■□□□ 1.42
MBD3-205ENST00000589064 KLF18A0A0U1RQI7 1052 aa23.92■■□□□ 1.42
MBD3-205ENST00000589064 FGD1P98174 961 aa23.92■■□□□ 1.42
MBD3-205ENST00000589064 FPGSQ05932 587 aa23.92■■□□□ 1.42
MBD3-205ENST00000589064 SMARCC2Q8TAQ2 1214 aa23.92■■□□□ 1.42
MBD3-205ENST00000589064 PPP1R13LQ8WUF5 828 aa23.92■■□□□ 1.42
MBD3-205ENST00000589064 CUL5Q93034 780 aa23.92■■□□□ 1.42
MBD3-205ENST00000589064 MEIS2O14770 477 aa23.91■■□□□ 1.42
MBD3-205ENST00000589064 B4GALT4O60513 344 aa23.91■■□□□ 1.42
MBD3-205ENST00000589064 RTN1Q16799 776 aa23.91■■□□□ 1.42
MBD3-205ENST00000589064 NBPF20Q3BBV1 942 aa23.91■■□□□ 1.42
MBD3-205ENST00000589064 MFSD5Q6N075 450 aa23.91■■□□□ 1.42
MBD3-205ENST00000589064 ALDH8A1Q9H2A2 487 aaPredicted RBP23.91■■□□□ 1.42
MBD3-205ENST00000589064 RBM28Q9NW13 759 aaKnown RBP23.91■■□□□ 1.42
MBD3-205ENST00000589064 NAP1L2Q9ULW6 460 aaPredicted RBP23.91■■□□□ 1.42
MBD3-205ENST00000589064 Q6ZUG5 572 aa23.9■■□□□ 1.42
MBD3-205ENST00000589064 DHX37Q8IY37 1157 aaKnown RBP23.9■■□□□ 1.42
MBD3-205ENST00000589064 PSTPIP2Q9H939 334 aa23.9■■□□□ 1.42
MBD3-205ENST00000589064 SORBS3O60504 671 aa23.89■■□□□ 1.42
MBD3-205ENST00000589064 MMP3P08254 477 aa23.89■■□□□ 1.42
MBD3-205ENST00000589064 CYP2C18P33260 490 aa23.89■■□□□ 1.42
MBD3-205ENST00000589064 CHMP4BP1P59074 171 aa23.89■■□□□ 1.42
MBD3-205ENST00000589064 LAMC2Q13753 1193 aa23.89■■□□□ 1.42
MBD3-205ENST00000589064 BLOC1S2Q6QNY1 142 aa23.89■■□□□ 1.42
MBD3-205ENST00000589064 GPKOWQ92917 476 aaPredicted RBP eCLIP23.89■■□□□ 1.42
MBD3-205ENST00000589064 FAM217BQ9NTX9 383 aaPredicted RBP23.89■■□□□ 1.42
MBD3-205ENST00000589064 GOLGA8AA7E2F4 631 aa23.88■■□□□ 1.41
MBD3-205ENST00000589064 GOLGA8BA8MQT2 603 aa23.88■■□□□ 1.41
MBD3-205ENST00000589064 PIK3CDO00329 1044 aa23.88■■□□□ 1.41
MBD3-205ENST00000589064 CDC27P30260 824 aa23.88■■□□□ 1.41
MBD3-205ENST00000589064 MRPS9P82933 396 aaKnown RBP23.88■■□□□ 1.41
MBD3-205ENST00000589064 SP2Q02086 613 aa23.88■■□□□ 1.41
MBD3-205ENST00000589064 APOBRQ0VD83 1088 aa23.88■■□□□ 1.41
MBD3-205ENST00000589064 FAM47CQ5HY64 1035 aa23.88■■□□□ 1.41
MBD3-205ENST00000589064 KCNV1Q6PIU1 500 aa23.88■■□□□ 1.41
MBD3-205ENST00000589064 HEATR3Q7Z4Q2 680 aa23.88■■□□□ 1.41
MBD3-205ENST00000589064 HIPK3Q9H422 1215 aa23.88■■□□□ 1.41
MBD3-205ENST00000589064 TRMT13Q9NUP7 481 aaKnown RBP23.88■■□□□ 1.41
MBD3-205ENST00000589064 RTEL1Q9NZ71 1219 aa23.88■■□□□ 1.41
MBD3-205ENST00000589064 V9GY48 417 aaPredicted RBP23.88■■□□□ 1.41
MBD3-205ENST00000589064 CSF2RAP15509 400 aa23.87■■□□□ 1.41
MBD3-205ENST00000589064 CASTP20810 708 aaKnown RBP23.87■■□□□ 1.41
MBD3-205ENST00000589064 FUT2Q10981 343 aa23.87■■□□□ 1.41
MBD3-205ENST00000589064 TMEM199Q8N511 208 aa23.87■■□□□ 1.41
MBD3-205ENST00000589064 BRF1Q92994 677 aa23.87■■□□□ 1.41
MBD3-205ENST00000589064 EMID1Q96A84 441 aaPredicted RBP23.87■■□□□ 1.41
MBD3-205ENST00000589064 TGFB3P10600 412 aa23.87■■□□□ 1.41
MBD3-205ENST00000589064 RPS6KB1P23443 525 aa23.87■■□□□ 1.41
MBD3-205ENST00000589064 PSMA5P28066 241 aa23.87■■□□□ 1.41
MBD3-205ENST00000589064 DGKDQ16760 1214 aa23.87■■□□□ 1.41
MBD3-205ENST00000589064 CELF3Q5SZQ8 465 aaKnown RBP23.87■■□□□ 1.41
MBD3-205ENST00000589064 MYSM1Q5VVJ2 828 aa23.87■■□□□ 1.41
MBD3-205ENST00000589064 USP26Q9BXU7 913 aa23.87■■□□□ 1.41
MBD3-205ENST00000589064 FRMPD4Q14CM0 1322 aa23.86■■□□□ 1.41
MBD3-205ENST00000589064 UMODL1Q5DID0 1318 aa23.86■■□□□ 1.41
MBD3-205ENST00000589064 CNTNAP5Q8WYK1 1306 aa23.86■■□□□ 1.41
MBD3-205ENST00000589064 GGPS1O95749 300 aa23.86■■□□□ 1.41
MBD3-205ENST00000589064 SUPT20HL2P0C7V6 817 aa23.86■■□□□ 1.41
MBD3-205ENST00000589064 CYP2C9P11712 490 aa23.86■■□□□ 1.41
MBD3-205ENST00000589064 ADD1P35611 737 aaKnown RBP23.86■■□□□ 1.41
MBD3-205ENST00000589064 PPIGQ13427 754 aaKnown RBP eCLIP23.86■■□□□ 1.413e-9■■□□□ 12.7
MBD3-205ENST00000589064 UBE2SQ16763 222 aa23.86■■□□□ 1.41
MBD3-205ENST00000589064 GPR153Q6NV75 609 aa23.86■■□□□ 1.41
MBD3-205ENST00000589064 NFRKBQ6P4R8 1299 aa23.86■■□□□ 1.41
MBD3-205ENST00000589064 C16orf59Q7L2K0 433 aa23.86■■□□□ 1.41
MBD3-205ENST00000589064 KAT2BQ92831 832 aa23.86■■□□□ 1.41
MBD3-205ENST00000589064 NOC4LQ9BVI4 516 aaKnown RBP23.86■■□□□ 1.41
MBD3-205ENST00000589064 BCAS3Q9H6U6 928 aa23.86■■□□□ 1.41
MBD3-205ENST00000589064 MYH6P13533 1939 aa23.86■■□□□ 1.41
MBD3-205ENST00000589064 UBA1P22314 1058 aaKnown RBP23.85■■□□□ 1.41
MBD3-205ENST00000589064 CCL23P55773 120 aa23.85■■□□□ 1.41
MBD3-205ENST00000589064 WWC2Q6AWC2 1192 aa23.85■■□□□ 1.41
MBD3-205ENST00000589064 PPTC7Q8NI37 304 aa23.85■■□□□ 1.41
MBD3-205ENST00000589064 RNPC3Q96LT9 517 aaKnown RBP23.85■■□□□ 1.41
MBD3-205ENST00000589064 SPATA33Q96N06 139 aa23.85■■□□□ 1.41
MBD3-205ENST00000589064 INPP4AQ96PE3 977 aaPredicted RBP23.85■■□□□ 1.41
MBD3-205ENST00000589064 LTBP2Q14767 1821 aa23.85■■□□□ 1.41
MBD3-205ENST00000589064 EPB41L2O43491 1005 aaKnown RBP23.84■■□□□ 1.41
MBD3-205ENST00000589064 STAM2O75886 525 aa23.84■■□□□ 1.41
MBD3-205ENST00000589064 ACRP10323 421 aa23.84■■□□□ 1.41
MBD3-205ENST00000589064 METAP2P50579 478 aaKnown RBP eCLIP23.84■■□□□ 1.416e-11■■■□□ 17.7
MBD3-205ENST00000589064 RCAN1P53805 252 aa23.84■■□□□ 1.41
MBD3-205ENST00000589064 GNPTABQ3T906 1256 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms