RNA–Protein interactions for RNA: ENST00000588892.1

U2AF1L4-210, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, human

TSL 2

Gene U2AF1L4, Length 2,582 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1L4-210	ENST00000588892	SYNRG	Q9UMZ2	1314 aa		12.53	□□□□□ -0.4
U2AF1L4-210	ENST00000588892	PPFIA4	O75335	1185 aa		12.53	□□□□□ -0.4
U2AF1L4-210	ENST00000588892	NPM3	O75607	178 aa	Known RBP	12.53	□□□□□ -0.4
U2AF1L4-210	ENST00000588892	PRPF6	O94906	941 aa	Known RBP	12.53	□□□□□ -0.4
U2AF1L4-210	ENST00000588892	DPYD	Q12882	1025 aa		12.53	□□□□□ -0.4
U2AF1L4-210	ENST00000588892	CCDC178	Q5BJE1	867 aa		12.53	□□□□□ -0.4
U2AF1L4-210	ENST00000588892	DLK2	Q6UY11	383 aa		12.53	□□□□□ -0.4
U2AF1L4-210	ENST00000588892	FAM151A	Q8WW52	585 aa		12.53	□□□□□ -0.4
U2AF1L4-210	ENST00000588892	MYBL2	P10244	700 aa		12.52	□□□□□ -0.4
U2AF1L4-210	ENST00000588892	YBX3	P16989	372 aa	Known RBP eCLIP	12.52	□□□□□ -0.4
U2AF1L4-210	ENST00000588892	TAL1	P17542	331 aa	Predicted RBP	12.52	□□□□□ -0.4
U2AF1L4-210	ENST00000588892	GGCX	P38435	758 aa		12.52	□□□□□ -0.4
U2AF1L4-210	ENST00000588892	NLRP5	P59047	1200 aa		12.52	□□□□□ -0.4
U2AF1L4-210	ENST00000588892	SNAP25	P60880	206 aa		12.52	□□□□□ -0.4
U2AF1L4-210	ENST00000588892	AMPD2	Q01433	879 aa		12.52	□□□□□ -0.4
U2AF1L4-210	ENST00000588892	ABCB5	Q2M3G0	1257 aa		12.52	□□□□□ -0.4
U2AF1L4-210	ENST00000588892	KIAA1755	Q5JYT7	1200 aa		12.52	□□□□□ -0.4
U2AF1L4-210	ENST00000588892	SPATA1	Q5VX52	437 aa		12.52	□□□□□ -0.4
U2AF1L4-210	ENST00000588892	MMS19	Q96T76	1030 aa		12.52	□□□□□ -0.4
U2AF1L4-210	ENST00000588892	SYT17	Q9BSW7	474 aa		12.52	□□□□□ -0.4
U2AF1L4-210	ENST00000588892	NAA15	Q9BXJ9	866 aa	Known RBP	12.52	□□□□□ -0.4
U2AF1L4-210	ENST00000588892	FOXP1	Q9H334	677 aa	Predicted RBP	12.52	□□□□□ -0.4
U2AF1L4-210	ENST00000588892	MED4	Q9NPJ6	270 aa		12.52	□□□□□ -0.4
U2AF1L4-210	ENST00000588892	TMOD2	Q9NZR1	351 aa		12.52	□□□□□ -0.4
U2AF1L4-210	ENST00000588892	POLR2A	P24928	1970 aa	Known RBP	12.52	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	SNHG28	P0DPA3	235 aa		12.52	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	KRT2	P35908	639 aa		12.52	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	LIG3	P49916	1009 aa		12.52	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	RASA3	Q14644	834 aa		12.52	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	SAFB	Q15424	915 aa	Known RBP eCLIP	12.52	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	WHAMMP3	Q1A5X7	153 aa		12.52	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	SPICE1	Q8N0Z3	855 aa		12.52	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	GLIS2	Q9BZE0	524 aa	Predicted RBP	12.52	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	GBP3	Q9H0R5	595 aa		12.52	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	HPCAL4	Q9UM19	191 aa		12.52	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	STXBP3	O00186	592 aa		12.51	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	PPP1R11	O60927	126 aa	Predicted RBP	12.51	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	CCT5	P48643	541 aa		12.51	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	ICA1	Q05084	483 aa		12.51	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	TNIP1	Q15025	636 aa		12.51	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	DNAJC21	Q5F1R6	531 aa	Known RBP	12.51	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	TTC19	Q6DKK2	380 aa	Predicted RBP	12.51	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	PIK3AP1	Q6ZUJ8	805 aa		12.51	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	MSL3	Q8N5Y2	521 aa	Known RBP	12.51	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	MTMR14	Q8NCE2	650 aa		12.51	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	CCDC148	Q8NFR7	591 aa		12.51	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	ACER1	Q8TDN7	264 aa		12.51	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	COA7	Q96BR5	231 aa		12.51	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	ABHD10	Q9NUJ1	306 aa		12.51	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	LTBP3	Q9NS15	1303 aa		12.51	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	ERCC5	P28715	1186 aa	Predicted RBP	12.51	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	ZNF280A	P59817	542 aa	Predicted RBP	12.51	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	ZNF543	Q08ER8	600 aa		12.51	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	CUL4B	Q13620	913 aa		12.51	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	TADA2B	Q86TJ2	420 aa		12.51	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	CNGA4	Q8IV77	575 aa		12.51	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	TRPM4	Q8TD43	1214 aa		12.51	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	KAT2B	Q92831	832 aa		12.51	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	CCDC17	Q96LX7	622 aa		12.51	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	YY1AP1	Q9H869	796 aa		12.51	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	CTNND2	Q9UQB3	1225 aa		12.51	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	ZC3H4	Q9UPT8	1303 aa	Known RBP	12.51	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	USP17L10	C9JJH3	530 aa		12.5	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	N4BP3	O15049	544 aa		12.5	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	ATP1A1	P05023	1023 aa	Known RBP	12.5	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	DGKZ	Q13574	1117 aa		12.5	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	CCDC96	Q2M329	555 aa		12.5	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	CDKAL1	Q5VV42	579 aa		12.5	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	WDR93	Q6P2C0	686 aa		12.5	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	ADGRF4	Q8IZF3	695 aa		12.5	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	TRIML1	Q8N9V2	468 aa		12.5	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	SPATA20	Q8TB22	786 aa		12.5	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	SPZ1	Q9BXG8	430 aa		12.5	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	ACBD3	Q9H3P7	528 aa		12.5	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	TAB2	Q9NYJ8	693 aa		12.5	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	HACL1	Q9UJ83	578 aa		12.5	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	REXO2	Q9Y3B8	237 aa	Known RBP	12.5	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	EPS15	P42566	896 aa		12.5	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	NT5C2	P49902	561 aa		12.5	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	USP14	P54578	494 aa		12.5	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	MRPS25	P82663	173 aa	Known RBP	12.5	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	ZNF174	Q15697	407 aa		12.5	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	ZYX	Q15942	572 aa	Known RBP	12.5	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	FILIP1L	Q4L180	1135 aa		12.5	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	TEPSIN	Q96N21	525 aa		12.5	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	BLZF1	Q9H2G9	400 aa		12.5	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	DEF6	Q9H4E7	631 aa		12.5	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	RIOX1	Q9H6W3	641 aa		12.5	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	JMJD4	Q9H9V9	463 aa		12.5	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	GEMIN8	Q9NWZ8	242 aa	Known RBP	12.5	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	MAPK8IP1	Q9UQF2	711 aa		12.5	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	PPP1R3G	B7ZBB8	358 aa		12.49	□□□□□ -0.41
U2AF1L4-210	ENST00000588892		F5H6K3	240 aa		12.49	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	AGPS	O00116	658 aa		12.49	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	ZNF185	O15231	689 aa		12.49	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	XBP1	P17861	261 aa		12.49	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	KRT9	P35527	623 aa		12.49	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	GNAQ	P50148	359 aa		12.49	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	KLRC3	Q07444	240 aa		12.49	□□□□□ -0.41
U2AF1L4-210	ENST00000588892	STIM1	Q13586	685 aa		12.49	□□□□□ -0.41

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