RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 MAGEF1Q9HAY2 307 aa9.87□□□□□ -0.83
SMAD4-206ENST00000588860 GPRC5DQ9NZD1 345 aa9.87□□□□□ -0.83
SMAD4-206ENST00000588860 IFNKQ9P0W0 207 aa9.87□□□□□ -0.83
SMAD4-206ENST00000588860 LRWD1Q9UFC0 647 aa9.87□□□□□ -0.83
SMAD4-206ENST00000588860 PAPPA2Q9BXP8 1791 aa9.87□□□□□ -0.83
SMAD4-206ENST00000588860 MYH11P35749 1972 aa9.86□□□□□ -0.83
SMAD4-206ENST00000588860 SYNRGQ9UMZ2 1314 aa9.86□□□□□ -0.83
SMAD4-206ENST00000588860 WDR81Q562E7 1941 aa9.86□□□□□ -0.83
SMAD4-206ENST00000588860 KIAA1217Q5T5P2 1943 aa9.86□□□□□ -0.83
SMAD4-206ENST00000588860 SPDYE3A6NKU9 549 aa9.86□□□□□ -0.83
SMAD4-206ENST00000588860 MEIS2O14770 477 aa9.86□□□□□ -0.83
SMAD4-206ENST00000588860 CTNND1O60716 968 aaKnown RBP9.86□□□□□ -0.83
SMAD4-206ENST00000588860 PLA2G6O60733 806 aa9.86□□□□□ -0.83
SMAD4-206ENST00000588860 FOSP01100 380 aaPredicted RBP9.86□□□□□ -0.83
SMAD4-206ENST00000588860 USP11P51784 963 aa9.86□□□□□ -0.83
SMAD4-206ENST00000588860 ARHGAP4P98171 946 aa9.86□□□□□ -0.83
SMAD4-206ENST00000588860 FANCCQ00597 558 aa9.86□□□□□ -0.83
SMAD4-206ENST00000588860 FMR1Q06787 632 aaKnown RBP eCLIP9.86□□□□□ -0.837e-8■■■□□ 16.8
SMAD4-206ENST00000588860 NAALADL2Q58DX5 795 aa9.86□□□□□ -0.83
SMAD4-206ENST00000588860 TRMT44Q8IYL2 757 aaKnown RBP9.86□□□□□ -0.83
SMAD4-206ENST00000588860 GPC2Q8N158 579 aa9.86□□□□□ -0.83
SMAD4-206ENST00000588860 IGSF22Q8N9C0 903 aa9.86□□□□□ -0.83
SMAD4-206ENST00000588860 HOOK2Q96ED9 719 aa9.86□□□□□ -0.83
SMAD4-206ENST00000588860 CDK5RAP3Q96JB5 506 aa9.86□□□□□ -0.83
SMAD4-206ENST00000588860 MTRQ99707 1265 aa9.86□□□□□ -0.83
SMAD4-206ENST00000588860 HSD3B7Q9H2F3 369 aa9.86□□□□□ -0.83
SMAD4-206ENST00000588860 RMND1Q9NWS8 449 aa9.86□□□□□ -0.83
SMAD4-206ENST00000588860 ABCB11O95342 1321 aa9.85□□□□□ -0.83
SMAD4-206ENST00000588860 GLTPD2A6NH11 291 aa9.85□□□□□ -0.83
SMAD4-206ENST00000588860 OPLAHO14841 1288 aa9.85□□□□□ -0.83
SMAD4-206ENST00000588860 WDR46O15213 610 aaKnown RBP9.85□□□□□ -0.83
SMAD4-206ENST00000588860 CBFA2T2O43439 604 aa9.85□□□□□ -0.83
SMAD4-206ENST00000588860 HSPA8P11142 646 aaKnown RBP9.85□□□□□ -0.83
SMAD4-206ENST00000588860 ATP1A3P13637 1013 aa9.85□□□□□ -0.83
SMAD4-206ENST00000588860 ERCC5P28715 1186 aaPredicted RBP9.85□□□□□ -0.83
SMAD4-206ENST00000588860 HOXA13P31271 388 aaPredicted RBP9.85□□□□□ -0.83
SMAD4-206ENST00000588860 INPP5BP32019 993 aa9.85□□□□□ -0.83
SMAD4-206ENST00000588860 CLCN1P35523 988 aa9.85□□□□□ -0.83
SMAD4-206ENST00000588860 CT47A1Q5JQC4 288 aaPredicted RBP9.85□□□□□ -0.83
SMAD4-206ENST00000588860 KRT79Q5XKE5 535 aa9.85□□□□□ -0.83
SMAD4-206ENST00000588860 KLHL10Q6JEL2 608 aa9.85□□□□□ -0.83
SMAD4-206ENST00000588860 CCDC186Q7Z3E2 898 aa9.85□□□□□ -0.83
SMAD4-206ENST00000588860 FCHSD1Q86WN1 690 aa9.85□□□□□ -0.83
SMAD4-206ENST00000588860 SMYD4Q8IYR2 804 aaPredicted RBP9.85□□□□□ -0.83
SMAD4-206ENST00000588860 ENOX1Q8TC92 643 aaKnown RBP9.85□□□□□ -0.83
SMAD4-206ENST00000588860 SNX29Q8TEQ0 813 aa9.85□□□□□ -0.83
SMAD4-206ENST00000588860 LRRC15Q8TF66 581 aa9.85□□□□□ -0.83
SMAD4-206ENST00000588860 HAS1Q92839 578 aa9.85□□□□□ -0.83
SMAD4-206ENST00000588860 RNF166Q96A37 237 aaPredicted RBP9.85□□□□□ -0.83
SMAD4-206ENST00000588860 P2RX7Q99572 595 aaKnown RBP9.85□□□□□ -0.83
SMAD4-206ENST00000588860 MMTAG2Q9BU76 263 aaKnown RBP9.85□□□□□ -0.83
SMAD4-206ENST00000588860 XPO4Q9C0E2 1151 aaKnown RBP9.85□□□□□ -0.83
SMAD4-206ENST00000588860 KCNF1Q9H3M0 494 aa9.85□□□□□ -0.83
SMAD4-206ENST00000588860 FBXO28Q9NVF7 368 aa9.85□□□□□ -0.83
SMAD4-206ENST00000588860 FANCLQ9NW38 375 aa9.85□□□□□ -0.83
SMAD4-206ENST00000588860 GGA3Q9NZ52 723 aa9.85□□□□□ -0.83
SMAD4-206ENST00000588860 NRBP1Q9UHY1 535 aa9.85□□□□□ -0.83
SMAD4-206ENST00000588860 CTNND2Q9UQB3 1225 aa9.85□□□□□ -0.83
SMAD4-206ENST00000588860 MRPL11Q9Y3B7 192 aaKnown RBP9.85□□□□□ -0.83
SMAD4-206ENST00000588860 CYP3A7-CYP3A51PA0A087WV96 503 aa9.84□□□□□ -0.83
SMAD4-206ENST00000588860 PPP1R3GB7ZBB8 358 aa9.84□□□□□ -0.83
SMAD4-206ENST00000588860 GCOM1H8Y6P7 765 aaPredicted RBP9.84□□□□□ -0.83
SMAD4-206ENST00000588860 PIK3CDO00329 1044 aa9.84□□□□□ -0.83
SMAD4-206ENST00000588860 SERPINC1P01008 464 aa9.84□□□□□ -0.83
SMAD4-206ENST00000588860 MYL1P05976 194 aa9.84□□□□□ -0.83
SMAD4-206ENST00000588860 POLR2MP0CAP2 368 aa9.84□□□□□ -0.83
SMAD4-206ENST00000588860 CYP3A7P24462 503 aa9.84□□□□□ -0.83
SMAD4-206ENST00000588860 SREBF1P36956 1147 aa9.84□□□□□ -0.83
SMAD4-206ENST00000588860 EPS15P42566 896 aa9.84□□□□□ -0.83
SMAD4-206ENST00000588860 VEGFBP49765 207 aa9.84□□□□□ -0.83
SMAD4-206ENST00000588860 STX17P56962 302 aa9.84□□□□□ -0.83
SMAD4-206ENST00000588860 GRB10Q13322 594 aa9.84□□□□□ -0.83
SMAD4-206ENST00000588860 PDIA5Q14554 519 aa9.84□□□□□ -0.83
SMAD4-206ENST00000588860 CCDC144BQ3MJ40 725 aa9.84□□□□□ -0.83
SMAD4-206ENST00000588860 ZNF658Q5TYW1 1059 aaPredicted RBP9.84□□□□□ -0.83
SMAD4-206ENST00000588860 PRAMEF18Q5VWM3 479 aa9.84□□□□□ -0.83
SMAD4-206ENST00000588860 MOXD1Q6UVY6 613 aa9.84□□□□□ -0.83
SMAD4-206ENST00000588860 SCYL3Q8IZE3 742 aa9.84□□□□□ -0.83
SMAD4-206ENST00000588860 EFCAB3Q8N7B9 438 aa9.84□□□□□ -0.83
SMAD4-206ENST00000588860 LPAR1Q92633 364 aa9.84□□□□□ -0.83
SMAD4-206ENST00000588860 GJA10Q969M2 543 aa9.84□□□□□ -0.83
SMAD4-206ENST00000588860 CCDC47Q96A33 483 aaKnown RBP9.84□□□□□ -0.83
SMAD4-206ENST00000588860 MBOAT7Q96N66 472 aa9.84□□□□□ -0.83
SMAD4-206ENST00000588860 PNMA5Q96PV4 448 aa9.84□□□□□ -0.83
SMAD4-206ENST00000588860 UIMC1Q96RL1 719 aa9.84□□□□□ -0.83
SMAD4-206ENST00000588860 WRNIP1Q96S55 665 aa9.84□□□□□ -0.83
SMAD4-206ENST00000588860 SLF1Q9BQI6 1058 aa9.84□□□□□ -0.83
SMAD4-206ENST00000588860 TANGO6Q9C0B7 1094 aa9.84□□□□□ -0.83
SMAD4-206ENST00000588860 KIAA1683Q9H0B3 1180 aa9.84□□□□□ -0.83
SMAD4-206ENST00000588860 EHMT1Q9H9B1 1298 aa9.84□□□□□ -0.83
SMAD4-206ENST00000588860 PICK1Q9NRD5 415 aa9.84□□□□□ -0.83
SMAD4-206ENST00000588860 KBTBD4Q9NVX7 518 aa9.84□□□□□ -0.83
SMAD4-206ENST00000588860 STK17AQ9UEE5 414 aa9.84□□□□□ -0.83
SMAD4-206ENST00000588860 CCPG1Q9ULG6 757 aa9.84□□□□□ -0.83
SMAD4-206ENST00000588860 NFE2L3Q9Y4A8 694 aa9.84□□□□□ -0.83
SMAD4-206ENST00000588860 SSC5DA1L4H1 1573 aa9.84□□□□□ -0.83
SMAD4-206ENST00000588860 LOC285556D6RIA3 1793 aa9.83□□□□□ -0.84
SMAD4-206ENST00000588860 TNRC18O15417 2968 aaPredicted RBP9.83□□□□□ -0.84
SMAD4-206ENST00000588860 ZNF500O60304 480 aaPredicted RBP9.83□□□□□ -0.84
SMAD4-206ENST00000588860 CFBP00751 764 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms