RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 B4E1Z4 1266 aa21.54■■□□□ 1.04
CCDC43-204ENST00000588687 ZNF213O14771 459 aa21.54■■□□□ 1.04
CCDC43-204ENST00000588687 LPXNO60711 386 aa21.54■■□□□ 1.04
CCDC43-204ENST00000588687 GH1P01241 217 aa21.54■■□□□ 1.04
CCDC43-204ENST00000588687 COL9A1P20849 921 aa21.54■■□□□ 1.04
CCDC43-204ENST00000588687 MFAP1P55081 439 aaKnown RBP21.54■■□□□ 1.04
CCDC43-204ENST00000588687 TCTN1Q2MV58 587 aa21.54■■□□□ 1.04
CCDC43-204ENST00000588687 SEPT14Q6ZU15 432 aa21.54■■□□□ 1.04
CCDC43-204ENST00000588687 IQCA1Q86XH1 822 aa21.54■■□□□ 1.04
CCDC43-204ENST00000588687 RETREG2Q8NC44 543 aa21.54■■□□□ 1.04
CCDC43-204ENST00000588687 IWS1Q96ST2 819 aa21.54■■□□□ 1.04
CCDC43-204ENST00000588687 ZSCAN10Q96SZ4 725 aaPredicted RBP21.54■■□□□ 1.04
CCDC43-204ENST00000588687 JMJD4Q9H9V9 463 aa21.54■■□□□ 1.04
CCDC43-204ENST00000588687 F2P00734 622 aa21.53■■□□□ 1.04
CCDC43-204ENST00000588687 KCNQ1P51787 676 aa21.53■■□□□ 1.04
CCDC43-204ENST00000588687 WDR5P61964 334 aaKnown RBP21.53■■□□□ 1.04
CCDC43-204ENST00000588687 TRAF7Q6Q0C0 670 aa21.53■■□□□ 1.04
CCDC43-204ENST00000588687 RMDN3Q96TC7 470 aa21.53■■□□□ 1.04
CCDC43-204ENST00000588687 IL25Q9H293 177 aa21.53■■□□□ 1.04
CCDC43-204ENST00000588687 KAT14Q9H8E8 782 aa21.53■■□□□ 1.04
CCDC43-204ENST00000588687 GTF2IRD1Q9UHL9 959 aa21.53■■□□□ 1.04
CCDC43-204ENST00000588687 DDX41Q9UJV9 622 aaKnown RBP21.53■■□□□ 1.04
CCDC43-204ENST00000588687 LCHNA4D1U4 455 aa21.52■■□□□ 1.04
CCDC43-204ENST00000588687 HAS3O00219 553 aa21.52■■□□□ 1.04
CCDC43-204ENST00000588687 RGS20O76081 388 aa21.52■■□□□ 1.04
CCDC43-204ENST00000588687 CXCL10P02778 98 aa21.52■■□□□ 1.04
CCDC43-204ENST00000588687 HOXD8P13378 290 aaPredicted RBP21.52■■□□□ 1.04
CCDC43-204ENST00000588687 HSD17B4P51659 736 aa21.52■■□□□ 1.04
CCDC43-204ENST00000588687 STXBP2Q15833 593 aa21.52■■□□□ 1.04
CCDC43-204ENST00000588687 CCDC178Q5BJE1 867 aa21.52■■□□□ 1.04
CCDC43-204ENST00000588687 CWC27Q6UX04 472 aaKnown RBP21.52■■□□□ 1.04
CCDC43-204ENST00000588687 LRRC8DQ7L1W4 858 aa21.52■■□□□ 1.04
CCDC43-204ENST00000588687 DSCC1Q9BVC3 393 aa21.52■■□□□ 1.04
CCDC43-204ENST00000588687 FTOQ9C0B1 505 aaKnown RBP eCLIP21.52■■□□□ 1.04
CCDC43-204ENST00000588687 ZSWIM5Q9P217 1185 aa21.52■■□□□ 1.04
CCDC43-204ENST00000588687 RAPGEFL1Q9UHV5 662 aa21.52■■□□□ 1.04
CCDC43-204ENST00000588687 NOD1Q9Y239 953 aa21.52■■□□□ 1.04
CCDC43-204ENST00000588687 MYH7BA7E2Y1 1941 aa21.52■■□□□ 1.04
CCDC43-204ENST00000588687 SIP14410 1827 aa21.52■■□□□ 1.04
CCDC43-204ENST00000588687 PPP1R11O60927 126 aaPredicted RBP21.51■■□□□ 1.03
CCDC43-204ENST00000588687 NBNO60934 754 aa21.51■■□□□ 1.03
CCDC43-204ENST00000588687 SELPP16109 830 aa21.51■■□□□ 1.03
CCDC43-204ENST00000588687 EIF2AK2P19525 551 aaKnown RBP21.51■■□□□ 1.03
CCDC43-204ENST00000588687 DEFB103AP81534 67 aa21.51■■□□□ 1.03
CCDC43-204ENST00000588687 NUCB1Q02818 461 aa21.51■■□□□ 1.03
CCDC43-204ENST00000588687 TRIM71Q2Q1W2 868 aaKnown RBP21.51■■□□□ 1.03
CCDC43-204ENST00000588687 TMCO2Q7Z6W1 182 aaPredicted RBP21.51■■□□□ 1.03
CCDC43-204ENST00000588687 CHD1LQ86WJ1 897 aa21.51■■□□□ 1.03
CCDC43-204ENST00000588687 MCF2L2Q86YR7 1114 aa21.51■■□□□ 1.03
CCDC43-204ENST00000588687 CCDC155Q8N6L0 562 aa21.51■■□□□ 1.03
CCDC43-204ENST00000588687 ARNTL2Q8WYA1 636 aa21.51■■□□□ 1.03
CCDC43-204ENST00000588687 WNT8BQ93098 351 aa21.51■■□□□ 1.03
CCDC43-204ENST00000588687 MTMR8Q96EF0 704 aa21.51■■□□□ 1.03
CCDC43-204ENST00000588687 TSPYL2Q9H2G4 693 aaPredicted RBP21.51■■□□□ 1.03
CCDC43-204ENST00000588687 PXMP2Q9NR77 195 aa21.51■■□□□ 1.03
CCDC43-204ENST00000588687 CKBP12277 381 aa21.5■■□□□ 1.03
CCDC43-204ENST00000588687 GRB10Q13322 594 aa21.5■■□□□ 1.03
CCDC43-204ENST00000588687 SLC35G1Q2M3R5 365 aa21.5■■□□□ 1.03
CCDC43-204ENST00000588687 CHST3Q7LGC8 479 aa21.5■■□□□ 1.03
CCDC43-204ENST00000588687 FBXO11Q86XK2 927 aa21.5■■□□□ 1.03
CCDC43-204ENST00000588687 STAG2Q8N3U4 1231 aa21.5■■□□□ 1.03
CCDC43-204ENST00000588687 PPTC7Q8NI37 304 aa21.5■■□□□ 1.03
CCDC43-204ENST00000588687 HDAC6Q9UBN7 1215 aa21.5■■□□□ 1.03
CCDC43-204ENST00000588687 MRPL11Q9Y3B7 192 aaKnown RBP21.5■■□□□ 1.03
CCDC43-204ENST00000588687 GTPBP6O43824 516 aaPredicted RBP21.49■■□□□ 1.03
CCDC43-204ENST00000588687 IGHDP01880 384 aa21.49■■□□□ 1.03
CCDC43-204ENST00000588687 NR3C2P08235 984 aa21.49■■□□□ 1.03
CCDC43-204ENST00000588687 PARP1P09874 1014 aaKnown RBP21.49■■□□□ 1.03
CCDC43-204ENST00000588687 ZNF286BP0CG31 522 aa21.49■■□□□ 1.03
CCDC43-204ENST00000588687 CASTP20810 708 aaKnown RBP21.49■■□□□ 1.03
CCDC43-204ENST00000588687 CHMP4BP1P59074 171 aa21.49■■□□□ 1.03
CCDC43-204ENST00000588687 MKRN4PQ13434 485 aaPredicted RBP21.49■■□□□ 1.03
CCDC43-204ENST00000588687 HIC1Q14526 733 aa21.49■■□□□ 1.03
CCDC43-204ENST00000588687 MBTPS1Q14703 1052 aa21.49■■□□□ 1.03
CCDC43-204ENST00000588687 SEC23AQ15436 765 aa21.49■■□□□ 1.03
CCDC43-204ENST00000588687 DGKDQ16760 1214 aa21.49■■□□□ 1.03
CCDC43-204ENST00000588687 B4GALNT3Q6L9W6 998 aa21.49■■□□□ 1.03
CCDC43-204ENST00000588687 MICAL3Q7RTP6 2002 aa21.49■■□□□ 1.03
CCDC43-204ENST00000588687 TLL1O43897 1013 aa21.48■■□□□ 1.03
CCDC43-204ENST00000588687 EIF3JO75822 258 aaKnown RBP21.48■■□□□ 1.03
CCDC43-204ENST00000588687 PSEN2P49810 448 aa21.48■■□□□ 1.03
CCDC43-204ENST00000588687 AAMPQ13685 434 aa21.48■■□□□ 1.03
CCDC43-204ENST00000588687 ARHGEF16Q5VV41 709 aa21.48■■□□□ 1.03
CCDC43-204ENST00000588687 CNKSR3Q6P9H4 555 aa21.48■■□□□ 1.03
CCDC43-204ENST00000588687 IL27Q8NEV9 243 aa21.48■■□□□ 1.03
CCDC43-204ENST00000588687 DIAPH3Q9NSV4 1193 aa21.48■■□□□ 1.03
CCDC43-204ENST00000588687 KIF28PB7ZC32 967 aa21.47■■□□□ 1.03
CCDC43-204ENST00000588687 KCNJ6P48051 423 aa21.47■■□□□ 1.03
CCDC43-204ENST00000588687 MFSD10Q14728 455 aa21.47■■□□□ 1.03
CCDC43-204ENST00000588687 AAK1Q2M2I8 961 aa21.47■■□□□ 1.03
CCDC43-204ENST00000588687 IL31RAQ8NI17 732 aa21.47■■□□□ 1.03
CCDC43-204ENST00000588687 PDCD2LQ9BRP1 358 aa21.47■■□□□ 1.03
CCDC43-204ENST00000588687 MAD2L2Q9UI95 211 aa21.47■■□□□ 1.03
CCDC43-204ENST00000588687 MRVI1Q9Y6F6 885 aa21.47■■□□□ 1.03
CCDC43-204ENST00000588687 GJB5O95377 273 aa21.46■■□□□ 1.03
CCDC43-204ENST00000588687 PARNO95453 639 aaKnown RBP21.46■■□□□ 1.03
CCDC43-204ENST00000588687 CFBP00751 764 aa21.46■■□□□ 1.03
CCDC43-204ENST00000588687 PTK7Q13308 1070 aa21.46■■□□□ 1.03
CCDC43-204ENST00000588687 LAMC2Q13753 1193 aa21.46■■□□□ 1.03
CCDC43-204ENST00000588687 SKIV2LQ15477 1246 aaKnown RBP21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms