RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 IL17RAQ96F46 866 aa12.11□□□□□ -0.47
TPM4-209ENST00000588483 ZSWIM6Q9HCJ5 1215 aa12.11□□□□□ -0.47
TPM4-209ENST00000588483 DDX41Q9UJV9 622 aaKnown RBP12.11□□□□□ -0.47
TPM4-209ENST00000588483 TBX21Q9UL17 535 aa12.11□□□□□ -0.47
TPM4-209ENST00000588483 GRIN2DO15399 1336 aa12.11□□□□□ -0.47
TPM4-209ENST00000588483 DCDC2CA8MYV0 355 aa12.1□□□□□ -0.47
TPM4-209ENST00000588483 KPNA6O60684 536 aa12.1□□□□□ -0.47
TPM4-209ENST00000588483 PQBP1O60828 265 aaKnown RBP12.1□□□□□ -0.47
TPM4-209ENST00000588483 GH1P01241 217 aa12.1□□□□□ -0.47
TPM4-209ENST00000588483 TGFB3P10600 412 aa12.1□□□□□ -0.47
TPM4-209ENST00000588483 HOXD8P13378 290 aaPredicted RBP12.1□□□□□ -0.47
TPM4-209ENST00000588483 CPA1P15085 419 aa12.1□□□□□ -0.47
TPM4-209ENST00000588483 ARHGAP1Q07960 439 aa12.1□□□□□ -0.47
TPM4-209ENST00000588483 LRIT3Q3SXY7 679 aa12.1□□□□□ -0.47
TPM4-209ENST00000588483 BRDTQ58F21 947 aaPredicted RBP12.1□□□□□ -0.47
TPM4-209ENST00000588483 PPP1R18Q6NYC8 613 aa12.1□□□□□ -0.47
TPM4-209ENST00000588483 XRRA1Q6P2D8 792 aa12.1□□□□□ -0.47
TPM4-209ENST00000588483 Q6ZUG5 572 aa12.1□□□□□ -0.47
TPM4-209ENST00000588483 SH3RF1Q7Z6J0 888 aa12.1□□□□□ -0.47
TPM4-209ENST00000588483 TDHQ8IZJ6 230 aa12.1□□□□□ -0.47
TPM4-209ENST00000588483 IL31RAQ8NI17 732 aa12.1□□□□□ -0.47
TPM4-209ENST00000588483 COPS5Q92905 334 aa12.1□□□□□ -0.47
TPM4-209ENST00000588483 INPP4AQ96PE3 977 aaPredicted RBP12.1□□□□□ -0.47
TPM4-209ENST00000588483 CCDC196A0A1B0GTZ2 297 aa12.09□□□□□ -0.47
TPM4-209ENST00000588483 GOLGA8AA7E2F4 631 aa12.09□□□□□ -0.47
TPM4-209ENST00000588483 GOLGA8BA8MQT2 603 aa12.09□□□□□ -0.47
TPM4-209ENST00000588483 CASTP20810 708 aaKnown RBP12.09□□□□□ -0.47
TPM4-209ENST00000588483 ITGB8P26012 769 aa12.09□□□□□ -0.47
TPM4-209ENST00000588483 CDC27P30260 824 aa12.09□□□□□ -0.47
TPM4-209ENST00000588483 CCND2P30279 289 aa12.09□□□□□ -0.47
TPM4-209ENST00000588483 ICAM3P32942 547 aa12.09□□□□□ -0.47
TPM4-209ENST00000588483 METAP2P50579 478 aaKnown RBP eCLIP12.09□□□□□ -0.47
TPM4-209ENST00000588483 MDM2Q00987 491 aaPredicted RBP12.09□□□□□ -0.47
TPM4-209ENST00000588483 ITGA7Q13683 1181 aa12.09□□□□□ -0.47
TPM4-209ENST00000588483 LY6KQ17RY6 165 aa12.09□□□□□ -0.47
TPM4-209ENST00000588483 PCNX4Q63HM2 1172 aa12.09□□□□□ -0.47
TPM4-209ENST00000588483 SEPT14Q6ZU15 432 aa12.09□□□□□ -0.47
TPM4-209ENST00000588483 RUFY3Q7L099 469 aa12.09□□□□□ -0.47
TPM4-209ENST00000588483 RAB11FIP4Q86YS3 637 aa12.09□□□□□ -0.47
TPM4-209ENST00000588483 PIBF1Q8WXW3 757 aa12.09□□□□□ -0.47
TPM4-209ENST00000588483 BRF1Q92994 677 aa12.09□□□□□ -0.47
TPM4-209ENST00000588483 CUL5Q93034 780 aa12.09□□□□□ -0.47
TPM4-209ENST00000588483 LBHD1Q9BQE6 289 aaPredicted RBP12.09□□□□□ -0.47
TPM4-209ENST00000588483 MTG1Q9BT17 334 aaPredicted RBP12.09□□□□□ -0.47
TPM4-209ENST00000588483 UBE2OQ9C0C9 1292 aaKnown RBP12.09□□□□□ -0.47
TPM4-209ENST00000588483 MYH7BA7E2Y1 1941 aa12.08□□□□□ -0.48
TPM4-209ENST00000588483 TLR3O15455 904 aaKnown RBP12.08□□□□□ -0.48
TPM4-209ENST00000588483 TIMP1P01033 207 aa12.08□□□□□ -0.48
TPM4-209ENST00000588483 MMP3P08254 477 aa12.08□□□□□ -0.48
TPM4-209ENST00000588483 ANAPC15P60006 121 aa12.08□□□□□ -0.48
TPM4-209ENST00000588483 MRPS9P82933 396 aaKnown RBP12.08□□□□□ -0.48
TPM4-209ENST00000588483 FGD1P98174 961 aa12.08□□□□□ -0.48
TPM4-209ENST00000588483 PTPN11Q06124 597 aaPredicted RBP12.08□□□□□ -0.48
TPM4-209ENST00000588483 APOBRQ0VD83 1088 aa12.08□□□□□ -0.48
TPM4-209ENST00000588483 LAMC2Q13753 1193 aa12.08□□□□□ -0.48
TPM4-209ENST00000588483 WWC2Q6AWC2 1192 aa12.08□□□□□ -0.48
TPM4-209ENST00000588483 GPR153Q6NV75 609 aa12.08□□□□□ -0.48
TPM4-209ENST00000588483 NFRKBQ6P4R8 1299 aa12.08□□□□□ -0.48
TPM4-209ENST00000588483 USP17L6PQ6QN14 398 aa12.08□□□□□ -0.48
TPM4-209ENST00000588483 FCHSD1Q86WN1 690 aa12.08□□□□□ -0.48
TPM4-209ENST00000588483 CCDC82Q8N4S0 544 aa12.08□□□□□ -0.48
TPM4-209ENST00000588483 PPTC7Q8NI37 304 aa12.08□□□□□ -0.48
TPM4-209ENST00000588483 PSTPIP2Q9H939 334 aa12.08□□□□□ -0.48
TPM4-209ENST00000588483 PRDM5Q9NQX1 630 aaPredicted RBP12.08□□□□□ -0.48
TPM4-209ENST00000588483 TMEM39AQ9NV64 488 aa12.08□□□□□ -0.48
TPM4-209ENST00000588483 MRVI1Q9Y6F6 885 aa12.08□□□□□ -0.48
TPM4-209ENST00000588483 hCG_1642624A0A1W2PR95 340 aa12.07□□□□□ -0.48
TPM4-209ENST00000588483 STXBP3O00186 592 aa12.07□□□□□ -0.48
TPM4-209ENST00000588483 EIF5BO60841 1220 aaKnown RBP12.07□□□□□ -0.48
TPM4-209ENST00000588483 MYCLP12524 364 aaPredicted RBP12.07□□□□□ -0.48
TPM4-209ENST00000588483 UBA1P22314 1058 aaKnown RBP12.07□□□□□ -0.48
TPM4-209ENST00000588483 ADD1P35611 737 aaKnown RBP12.07□□□□□ -0.48
TPM4-209ENST00000588483 TOB2Q14106 344 aaPredicted RBP12.07□□□□□ -0.48
TPM4-209ENST00000588483 NTRK3Q16288 839 aa12.07□□□□□ -0.48
TPM4-209ENST00000588483 GNPTABQ3T906 1256 aa12.07□□□□□ -0.48
TPM4-209ENST00000588483 CELF3Q5SZQ8 465 aaKnown RBP12.07□□□□□ -0.48
TPM4-209ENST00000588483 MYSM1Q5VVJ2 828 aa12.07□□□□□ -0.48
TPM4-209ENST00000588483 TYW1BQ6NUM6 668 aa12.07□□□□□ -0.48
TPM4-209ENST00000588483 SESTD1Q86VW0 696 aa12.07□□□□□ -0.48
TPM4-209ENST00000588483 SMARCC2Q8TAQ2 1214 aa12.07□□□□□ -0.48
TPM4-209ENST00000588483 AFG1LQ8WV93 481 aa12.07□□□□□ -0.48
TPM4-209ENST00000588483 BADQ92934 168 aa12.07□□□□□ -0.48
TPM4-209ENST00000588483 VTI1AQ96AJ9 217 aa12.07□□□□□ -0.48
TPM4-209ENST00000588483 GLT8D2Q9H1C3 349 aa12.07□□□□□ -0.48
TPM4-209ENST00000588483 ALDH8A1Q9H2A2 487 aaPredicted RBP12.07□□□□□ -0.48
TPM4-209ENST00000588483 RIC8AQ9NPQ8 531 aa12.07□□□□□ -0.48
TPM4-209ENST00000588483 BARHL2Q9NY43 387 aa12.07□□□□□ -0.48
TPM4-209ENST00000588483 PCDH10Q9P2E7 1040 aa12.07□□□□□ -0.48
TPM4-209ENST00000588483 ESYT2A0FGR8 921 aa12.06□□□□□ -0.48
TPM4-209ENST00000588483 SPATA31C2B4DYI2 1134 aa12.06□□□□□ -0.48
TPM4-209ENST00000588483 FIBPO43427 364 aa12.06□□□□□ -0.48
TPM4-209ENST00000588483 B4GALT4O60513 344 aa12.06□□□□□ -0.48
TPM4-209ENST00000588483 RAG1P15918 1043 aa12.06□□□□□ -0.48
TPM4-209ENST00000588483 CLK2P49760 499 aaKnown RBP12.06□□□□□ -0.48
TPM4-209ENST00000588483 PSMC6P62333 389 aa12.06□□□□□ -0.48
TPM4-209ENST00000588483 SP2Q02086 613 aa12.06□□□□□ -0.48
TPM4-209ENST00000588483 SEMA3FQ13275 785 aa12.06□□□□□ -0.48
TPM4-209ENST00000588483 DGKDQ16760 1214 aa12.06□□□□□ -0.48
TPM4-209ENST00000588483 PFKFB3Q16875 520 aaPredicted RBP12.06□□□□□ -0.48
TPM4-209ENST00000588483 MFSD5Q6N075 450 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms