RNA–Protein interactions for RNA: ENST00000588411.5

CIRBP-219, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-219ENST00000588411 NEK1Q96PY6 1258 aa25.2■■□□□ 1.62
CIRBP-219ENST00000588411 CSF2RAP15509 400 aa25.19■■□□□ 1.62
CIRBP-219ENST00000588411 CYP2C18P33260 490 aa25.19■■□□□ 1.62
CIRBP-219ENST00000588411 ARHGAP1Q07960 439 aa25.19■■□□□ 1.62
CIRBP-219ENST00000588411 LAMC2Q13753 1193 aa25.19■■□□□ 1.62
CIRBP-219ENST00000588411 PGM5Q15124 567 aa25.19■■□□□ 1.62
CIRBP-219ENST00000588411 MTMR10Q9NXD2 777 aa25.19■■□□□ 1.62
CIRBP-219ENST00000588411 DDX41Q9UJV9 622 aaKnown RBP25.19■■□□□ 1.62
CIRBP-219ENST00000588411 MMP3P08254 477 aa25.18■■□□□ 1.62
CIRBP-219ENST00000588411 CASTP20810 708 aaKnown RBP25.18■■□□□ 1.62
CIRBP-219ENST00000588411 PTPN11Q06124 597 aaPredicted RBP25.18■■□□□ 1.62
CIRBP-219ENST00000588411 NBPF20Q3BBV1 942 aa25.18■■□□□ 1.62
CIRBP-219ENST00000588411 VSIG10LQ86VR7 867 aa25.18■■□□□ 1.62
CIRBP-219ENST00000588411 SGMS1Q86VZ5 419 aa25.18■■□□□ 1.62
CIRBP-219ENST00000588411 EMID1Q96A84 441 aaPredicted RBP25.18■■□□□ 1.62
CIRBP-219ENST00000588411 NOC4LQ9BVI4 516 aaKnown RBP25.18■■□□□ 1.62
CIRBP-219ENST00000588411 LRRC2Q9BYS8 371 aa25.18■■□□□ 1.62
CIRBP-219ENST00000588411 BAZ2BQ9UIF8 2168 aaKnown RBP25.17■■□□□ 1.62
CIRBP-219ENST00000588411 DGKDQ16760 1214 aa25.17■■□□□ 1.62
CIRBP-219ENST00000588411 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.17■■□□□ 1.621e-7■■□□□ 12.5
CIRBP-219ENST00000588411 MTIF3Q9H2K0 278 aaKnown RBP25.17■■□□□ 1.62
CIRBP-219ENST00000588411 IL23AQ9NPF7 189 aa25.17■■□□□ 1.62
CIRBP-219ENST00000588411 TRMT13Q9NUP7 481 aaKnown RBP25.17■■□□□ 1.62
CIRBP-219ENST00000588411 PLEKHA8P1O95397 391 aa25.16■■□□□ 1.62
CIRBP-219ENST00000588411 HMGB1P09429 215 aaKnown RBP25.16■■□□□ 1.62
CIRBP-219ENST00000588411 RXRAP19793 462 aa25.16■■□□□ 1.62
CIRBP-219ENST00000588411 TSGA10IPQ3SY00 556 aa25.16■■□□□ 1.62
CIRBP-219ENST00000588411 DHX32Q7L7V1 743 aaKnown RBP25.16■■□□□ 1.62
CIRBP-219ENST00000588411 MICU3Q86XE3 530 aa25.16■■□□□ 1.62
CIRBP-219ENST00000588411 DHX37Q8IY37 1157 aaKnown RBP25.16■■□□□ 1.62
CIRBP-219ENST00000588411 FANCBQ8NB91 859 aa25.16■■□□□ 1.62
CIRBP-219ENST00000588411 SMARCC2Q8TAQ2 1214 aa25.16■■□□□ 1.62
CIRBP-219ENST00000588411 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.15■■□□□ 1.62
CIRBP-219ENST00000588411 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.15■■□□□ 1.62
CIRBP-219ENST00000588411 STAM2O75886 525 aa25.15■■□□□ 1.62
CIRBP-219ENST00000588411 TGFB3P10600 412 aa25.15■■□□□ 1.62
CIRBP-219ENST00000588411 CHMP4BP1P59074 171 aa25.15■■□□□ 1.62
CIRBP-219ENST00000588411 GNPTABQ3T906 1256 aa25.15■■□□□ 1.62
CIRBP-219ENST00000588411 TMEM240Q5SV17 173 aa25.15■■□□□ 1.62
CIRBP-219ENST00000588411 SRBD1Q8N5C6 995 aaKnown RBP25.15■■□□□ 1.62
CIRBP-219ENST00000588411 PPTC7Q8NI37 304 aa25.15■■□□□ 1.62
CIRBP-219ENST00000588411 KATNAL1Q9BW62 490 aa25.15■■□□□ 1.62
CIRBP-219ENST00000588411 NOD1Q9Y239 953 aa25.15■■□□□ 1.62
CIRBP-219ENST00000588411 STXBP5LQ9Y2K9 1186 aa25.15■■□□□ 1.62
CIRBP-219ENST00000588411 CCL23P55773 120 aa25.14■■□□□ 1.62
CIRBP-219ENST00000588411 RPUSD2Q8IZ73 545 aaKnown RBP25.14■■□□□ 1.62
CIRBP-219ENST00000588411 IL31RAQ8NI17 732 aa25.14■■□□□ 1.62
CIRBP-219ENST00000588411 RBM28Q9NW13 759 aaKnown RBP25.14■■□□□ 1.62
CIRBP-219ENST00000588411 SCN10AQ9Y5Y9 1956 aa25.13■■□□□ 1.61
CIRBP-219ENST00000588411 PIK3CDO00329 1044 aa25.13■■□□□ 1.61
CIRBP-219ENST00000588411 ACRP10323 421 aa25.13■■□□□ 1.61
CIRBP-219ENST00000588411 COL9A3Q14050 684 aaPredicted RBP25.13■■□□□ 1.61
CIRBP-219ENST00000588411 TMTC3Q6ZXV5 915 aa25.13■■□□□ 1.61
CIRBP-219ENST00000588411 ZNF365Q70YC5 407 aa25.13■■□□□ 1.61
CIRBP-219ENST00000588411 FRMPD4Q14CM0 1322 aa25.12■■□□□ 1.61
CIRBP-219ENST00000588411 UMODL1Q5DID0 1318 aa25.12■■□□□ 1.61
CIRBP-219ENST00000588411 KIAA1217Q5T5P2 1943 aa25.12■■□□□ 1.61
CIRBP-219ENST00000588411 TMEM265A0A087WTH1 108 aa25.12■■□□□ 1.61
CIRBP-219ENST00000588411 RGS20O76081 388 aa25.12■■□□□ 1.61
CIRBP-219ENST00000588411 CYP2C9P11712 490 aa25.12■■□□□ 1.61
CIRBP-219ENST00000588411 FGD1P98174 961 aa25.12■■□□□ 1.61
CIRBP-219ENST00000588411 EXOSC10Q01780 885 aaKnown RBP25.12■■□□□ 1.61
CIRBP-219ENST00000588411 BFSP2Q13515 415 aa25.12■■□□□ 1.61
CIRBP-219ENST00000588411 CELF3Q5SZQ8 465 aaKnown RBP25.12■■□□□ 1.61
CIRBP-219ENST00000588411 APOA5Q6Q788 366 aa25.12■■□□□ 1.61
CIRBP-219ENST00000588411 C16orf59Q7L2K0 433 aa25.12■■□□□ 1.61
CIRBP-219ENST00000588411 RAB11FIP4Q86YS3 637 aa25.12■■□□□ 1.61
CIRBP-219ENST00000588411 RASEFQ8IZ41 740 aa25.12■■□□□ 1.61
CIRBP-219ENST00000588411 CMTR1Q8N1G2 835 aaKnown RBP25.12■■□□□ 1.61
CIRBP-219ENST00000588411 RETREG2Q8NC44 543 aa25.12■■□□□ 1.61
CIRBP-219ENST00000588411 SPATA33Q96N06 139 aa25.12■■□□□ 1.61
CIRBP-219ENST00000588411 ZBTB43O43298 467 aa25.11■■□□□ 1.61
CIRBP-219ENST00000588411 GGPS1O95749 300 aa25.11■■□□□ 1.61
CIRBP-219ENST00000588411 FGBP02675 491 aa25.11■■□□□ 1.61
CIRBP-219ENST00000588411 PFKMP08237 780 aa25.11■■□□□ 1.61
CIRBP-219ENST00000588411 XRRA1Q6P2D8 792 aa25.11■■□□□ 1.61
CIRBP-219ENST00000588411 SESTD1Q86VW0 696 aa25.11■■□□□ 1.61
CIRBP-219ENST00000588411 CCDC82Q8N4S0 544 aa25.11■■□□□ 1.61
CIRBP-219ENST00000588411 CCDC155Q8N6L0 562 aa25.11■■□□□ 1.61
CIRBP-219ENST00000588411 FAM161BQ96MY7 647 aa25.11■■□□□ 1.61
CIRBP-219ENST00000588411 WNT8AQ9H1J5 351 aa25.11■■□□□ 1.61
CIRBP-219ENST00000588411 PSTPIP2Q9H939 334 aa25.11■■□□□ 1.61
CIRBP-219ENST00000588411 MLXIPQ9HAP2 919 aa25.11■■□□□ 1.61
CIRBP-219ENST00000588411 LAMA2P24043 3122 aaKnown RBP25.11■■□□□ 1.61
CIRBP-219ENST00000588411 PPFIA4O75335 1185 aa25.1■■□□□ 1.61
CIRBP-219ENST00000588411 REC8O95072 547 aa25.1■■□□□ 1.61
CIRBP-219ENST00000588411 UBA1P22314 1058 aaKnown RBP25.1■■□□□ 1.61
CIRBP-219ENST00000588411 RTN1Q16799 776 aa25.1■■□□□ 1.61
CIRBP-219ENST00000588411 MYSM1Q5VVJ2 828 aa25.1■■□□□ 1.61
CIRBP-219ENST00000588411 USP17L6PQ6QN14 398 aa25.1■■□□□ 1.61
CIRBP-219ENST00000588411 C7orf31Q8N865 590 aa25.1■■□□□ 1.61
CIRBP-219ENST00000588411 HERVK_113Q902F9 699 aa25.1■■□□□ 1.61
CIRBP-219ENST00000588411 PITPNM1O00562 1244 aa25.09■■□□□ 1.61
CIRBP-219ENST00000588411 RFC2P35250 354 aa25.09■■□□□ 1.61
CIRBP-219ENST00000588411 PTGISQ16647 500 aa25.09■■□□□ 1.61
CIRBP-219ENST00000588411 ADCK5Q3MIX3 580 aa25.09■■□□□ 1.61
CIRBP-219ENST00000588411 RASIP1Q5U651 963 aa25.09■■□□□ 1.61
CIRBP-219ENST00000588411 HEATR3Q7Z4Q2 680 aa25.09■■□□□ 1.61
CIRBP-219ENST00000588411 KAT2BQ92831 832 aa25.09■■□□□ 1.61
CIRBP-219ENST00000588411 TCEANC2Q96MN5 208 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms