RNA–Protein interactions for RNA: ENST00000588228.5

NFIX-210, Transcript of nuclear factor I X, humanhuman

TSL 2 BASIC

Gene NFIX, Length 1,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-210ENST00000588228 ADAMTS5Q9UNA0 930 aa18.57■□□□□ 0.56
NFIX-210ENST00000588228 IGLV3-22A0A075B6J6 115 aa18.57■□□□□ 0.56
NFIX-210ENST00000588228 NF2P35240 595 aa18.57■□□□□ 0.56
NFIX-210ENST00000588228 OAZ1P54368 228 aa18.57■□□□□ 0.56
NFIX-210ENST00000588228 COG2Q14746 738 aa18.57■□□□□ 0.56
NFIX-210ENST00000588228 ZNF658Q5TYW1 1059 aaPredicted RBP18.57■□□□□ 0.56
NFIX-210ENST00000588228 CATSPERGQ6ZRH7 1159 aa18.57■□□□□ 0.56
NFIX-210ENST00000588228 NUDT12Q9BQG2 462 aa18.57■□□□□ 0.56
NFIX-210ENST00000588228 TRIM9Q9C026 710 aa18.57■□□□□ 0.56
NFIX-210ENST00000588228 NT5C3AQ9H0P0 336 aa18.57■□□□□ 0.56
NFIX-210ENST00000588228 BLOC1S4Q9NUP1 217 aa18.57■□□□□ 0.56
NFIX-210ENST00000588228 STK24Q9Y6E0 443 aa18.57■□□□□ 0.56
NFIX-210ENST00000588228 MYPNQ86TC9 1320 aa18.56■□□□□ 0.56
NFIX-210ENST00000588228 PHIPQ8WWQ0 1821 aa18.56■□□□□ 0.56
NFIX-210ENST00000588228 IQCA1LA6NCM1 817 aa18.56■□□□□ 0.56
NFIX-210ENST00000588228 ESPNB1AK53 854 aa18.56■□□□□ 0.56
NFIX-210ENST00000588228 MSH4O15457 936 aa18.56■□□□□ 0.56
NFIX-210ENST00000588228 FMR1Q06787 632 aaKnown RBP eCLIP18.56■□□□□ 0.56
NFIX-210ENST00000588228 SV2BQ7L1I2 683 aa18.56■□□□□ 0.56
NFIX-210ENST00000588228 REPS2Q8NFH8 660 aa18.56■□□□□ 0.56
NFIX-210ENST00000588228 LARP4BQ92615 738 aaKnown RBP18.56■□□□□ 0.56
NFIX-210ENST00000588228 CDCA5Q96FF9 252 aa18.56■□□□□ 0.56
NFIX-210ENST00000588228 RPTORQ8N122 1335 aa18.55■□□□□ 0.56
NFIX-210ENST00000588228 PPP1R3GB7ZBB8 358 aa18.55■□□□□ 0.56
NFIX-210ENST00000588228 KLRC4O43908 158 aa18.55■□□□□ 0.56
NFIX-210ENST00000588228 SPIRE1Q08AE8 756 aa18.55■□□□□ 0.56
NFIX-210ENST00000588228 HAUS3Q68CZ6 603 aa18.55■□□□□ 0.56
NFIX-210ENST00000588228 ZSCAN30Q86W11 494 aa18.55■□□□□ 0.56
NFIX-210ENST00000588228 CYP2W1Q8TAV3 490 aa18.55■□□□□ 0.56
NFIX-210ENST00000588228 RAD54LQ92698 747 aa18.55■□□□□ 0.56
NFIX-210ENST00000588228 CCDC47Q96A33 483 aaKnown RBP18.55■□□□□ 0.56
NFIX-210ENST00000588228 LRRC27Q9C0I9 530 aa18.55■□□□□ 0.56
NFIX-210ENST00000588228 TAF1DQ9H5J8 278 aaPredicted RBP18.55■□□□□ 0.56
NFIX-210ENST00000588228 RHOBTB3O94955 611 aa18.54■□□□□ 0.56
NFIX-210ENST00000588228 TPM3P06753 285 aa18.54■□□□□ 0.56
NFIX-210ENST00000588228 CD44P16070 742 aaKnown RBP18.54■□□□□ 0.56
NFIX-210ENST00000588228 CCT6AP40227 531 aaKnown RBP18.54■□□□□ 0.56
NFIX-210ENST00000588228 SETQ01105 290 aaPredicted RBP18.54■□□□□ 0.56
NFIX-210ENST00000588228 KMT5BQ4FZB7 885 aa18.54■□□□□ 0.56
NFIX-210ENST00000588228 CEP55Q53EZ4 464 aa18.54■□□□□ 0.56
NFIX-210ENST00000588228 MUM1L1Q5H9M0 696 aa18.54■□□□□ 0.56
NFIX-210ENST00000588228 SPC24Q8NBT2 197 aa18.54■□□□□ 0.56
NFIX-210ENST00000588228 ERMNQ8TAM6 284 aa18.54■□□□□ 0.56
NFIX-210ENST00000588228 GTPBP4Q9BZE4 634 aaKnown RBP18.54■□□□□ 0.56
NFIX-210ENST00000588228 FANCLQ9NW38 375 aa18.54■□□□□ 0.56
NFIX-210ENST00000588228 PAPPA2Q9BXP8 1791 aa18.54■□□□□ 0.56
NFIX-210ENST00000588228 ATP2A1O14983 1001 aa18.54■□□□□ 0.56
NFIX-210ENST00000588228 DRC7Q8IY82 874 aa18.54■□□□□ 0.56
NFIX-210ENST00000588228 ANKRD13AQ8IZ07 590 aa18.54■□□□□ 0.56
NFIX-210ENST00000588228 SYTL5Q8TDW5 730 aaPredicted RBP18.54■□□□□ 0.56
NFIX-210ENST00000588228 WNK4Q96J92 1243 aa18.54■□□□□ 0.56
NFIX-210ENST00000588228 TRERF1Q96PN7 1200 aa18.54■□□□□ 0.56
NFIX-210ENST00000588228 HOMER2Q9NSB8 354 aa18.54■□□□□ 0.56
NFIX-210ENST00000588228 HOXC10Q9NYD6 342 aa18.54■□□□□ 0.56
NFIX-210ENST00000588228 COL20A1Q9P218 1284 aa18.54■□□□□ 0.56
NFIX-210ENST00000588228 VAV3Q9UKW4 847 aa18.54■□□□□ 0.56
NFIX-210ENST00000588228 NFE2L3Q9Y4A8 694 aa18.54■□□□□ 0.56
NFIX-210ENST00000588228 FRMPD4Q14CM0 1322 aa18.53■□□□□ 0.56
NFIX-210ENST00000588228 SYNRGQ9UMZ2 1314 aa18.53■□□□□ 0.56
NFIX-210ENST00000588228 ASIC1P78348 528 aa18.53■□□□□ 0.56
NFIX-210ENST00000588228 FANCCQ00597 558 aa18.53■□□□□ 0.56
NFIX-210ENST00000588228 PPATQ06203 517 aa18.53■□□□□ 0.56
NFIX-210ENST00000588228 MCM6Q14566 821 aa18.53■□□□□ 0.56
NFIX-210ENST00000588228 ECM1Q16610 540 aa18.53■□□□□ 0.56
NFIX-210ENST00000588228 SPATA1Q5VX52 437 aa18.53■□□□□ 0.56
NFIX-210ENST00000588228 CNNM4Q6P4Q7 775 aa18.53■□□□□ 0.56
NFIX-210ENST00000588228 TRMT44Q8IYL2 757 aaKnown RBP18.53■□□□□ 0.56
NFIX-210ENST00000588228 SMYD4Q8IYR2 804 aaPredicted RBP18.53■□□□□ 0.56
NFIX-210ENST00000588228 FAM43AQ8N2R8 423 aa18.53■□□□□ 0.56
NFIX-210ENST00000588228 UIMC1Q96RL1 719 aa18.53■□□□□ 0.56
NFIX-210ENST00000588228 MED15Q96RN5 788 aa18.53■□□□□ 0.56
NFIX-210ENST00000588228 MEIS1O00470 390 aa18.52■□□□□ 0.56
NFIX-210ENST00000588228 ATP1A3P13637 1013 aa18.52■□□□□ 0.56
NFIX-210ENST00000588228 ZNF18P17022 549 aa18.52■□□□□ 0.56
NFIX-210ENST00000588228 STAT3P40763 770 aa18.52■□□□□ 0.56
NFIX-210ENST00000588228 RPS6P62753 249 aaKnown RBP18.52■□□□□ 0.56
NFIX-210ENST00000588228 UBXN2AP68543 259 aa18.52■□□□□ 0.56
NFIX-210ENST00000588228 NCAPH2Q6IBW4 605 aa18.52■□□□□ 0.56
NFIX-210ENST00000588228 KLHL10Q6JEL2 608 aa18.52■□□□□ 0.56
NFIX-210ENST00000588228 PNMA8AQ86V59 439 aaPredicted RBP18.52■□□□□ 0.56
NFIX-210ENST00000588228 SLC5A5Q92911 643 aa18.52■□□□□ 0.56
NFIX-210ENST00000588228 MXRA8Q9BRK3 442 aa18.52■□□□□ 0.56
NFIX-210ENST00000588228 RNF146Q9NTX7 359 aa18.52■□□□□ 0.56
NFIX-210ENST00000588228 IFNKQ9P0W0 207 aa18.52■□□□□ 0.56
NFIX-210ENST00000588228 ZNF214Q9UL59 606 aaPredicted RBP18.52■□□□□ 0.56
NFIX-210ENST00000588228 ZKSCAN5Q9Y2L8 839 aa18.52■□□□□ 0.56
NFIX-210ENST00000588228 POLR2AP24928 1970 aaKnown RBP18.52■□□□□ 0.55
NFIX-210ENST00000588228 SMCHD1A6NHR9 2005 aa18.51■□□□□ 0.55
NFIX-210ENST00000588228 RPA1P27694 616 aa18.51■□□□□ 0.55
NFIX-210ENST00000588228 DHX8Q14562 1220 aaKnown RBP18.51■□□□□ 0.55
NFIX-210ENST00000588228 TKFCQ3LXA3 575 aa18.51■□□□□ 0.55
NFIX-210ENST00000588228 EAPPQ56P03 285 aaPredicted RBP18.51■□□□□ 0.55
NFIX-210ENST00000588228 SNRNP48Q6IEG0 339 aaKnown RBP18.51■□□□□ 0.55
NFIX-210ENST00000588228 RNF207Q6ZRF8 634 aa18.51■□□□□ 0.55
NFIX-210ENST00000588228 NIPA1Q7RTP0 329 aa18.51■□□□□ 0.55
NFIX-210ENST00000588228 KCNK18Q7Z418 384 aa18.51■□□□□ 0.55
NFIX-210ENST00000588228 ERO1BQ86YB8 467 aa18.51■□□□□ 0.55
NFIX-210ENST00000588228 GIMAP8Q8ND71 665 aaPredicted RBP18.51■□□□□ 0.55
NFIX-210ENST00000588228 XPO4Q9C0E2 1151 aaKnown RBP18.51■□□□□ 0.55
NFIX-210ENST00000588228 MAF1Q9H063 256 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms