RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 FERMT2Q96AC1 680 aa12.82□□□□□ -0.36
VMP1-207ENST00000588131 LENG9Q96B70 501 aa12.82□□□□□ -0.36
VMP1-207ENST00000588131 UIMC1Q96RL1 719 aa12.82□□□□□ -0.36
VMP1-207ENST00000588131 RMDN3Q96TC7 470 aa12.82□□□□□ -0.36
VMP1-207ENST00000588131 PDCD2LQ9BRP1 358 aa12.82□□□□□ -0.36
VMP1-207ENST00000588131 CSRNP2Q9H175 543 aa12.82□□□□□ -0.36
VMP1-207ENST00000588131 MROH8Q9H579 483 aa12.82□□□□□ -0.36
VMP1-207ENST00000588131 PLXNB2O15031 1838 aa12.82□□□□□ -0.36
VMP1-207ENST00000588131 ASTN1O14525 1302 aa12.82□□□□□ -0.36
VMP1-207ENST00000588131 PFASO15067 1338 aa12.82□□□□□ -0.36
VMP1-207ENST00000588131 A0A1B0GVL5 298 aa12.81□□□□□ -0.36
VMP1-207ENST00000588131 SOWAHBA6NEL2 793 aa12.81□□□□□ -0.36
VMP1-207ENST00000588131 LAD1O00515 517 aa12.81□□□□□ -0.36
VMP1-207ENST00000588131 BCRP11274 1271 aa12.81□□□□□ -0.36
VMP1-207ENST00000588131 CMA1P23946 247 aa12.81□□□□□ -0.36
VMP1-207ENST00000588131 ZNF76P36508 570 aa12.81□□□□□ -0.36
VMP1-207ENST00000588131 PRPHP41219 470 aa12.81□□□□□ -0.36
VMP1-207ENST00000588131 MRPS9P82933 396 aaKnown RBP12.81□□□□□ -0.36
VMP1-207ENST00000588131 HTRA3P83110 453 aa12.81□□□□□ -0.36
VMP1-207ENST00000588131 CNTN2Q02246 1040 aa12.81□□□□□ -0.36
VMP1-207ENST00000588131 NOGQ13253 232 aa12.81□□□□□ -0.36
VMP1-207ENST00000588131 CALCRLQ16602 461 aa12.81□□□□□ -0.36
VMP1-207ENST00000588131 FAM110CQ1W6H9 321 aa12.81□□□□□ -0.36
VMP1-207ENST00000588131 PRR16Q569H4 304 aa12.81□□□□□ -0.36
VMP1-207ENST00000588131 WDR78Q5VTH9 848 aa12.81□□□□□ -0.36
VMP1-207ENST00000588131 ARHGEF16Q5VV41 709 aa12.81□□□□□ -0.36
VMP1-207ENST00000588131 RESP18Q5W5W9 173 aa12.81□□□□□ -0.36
VMP1-207ENST00000588131 PCNX4Q63HM2 1172 aa12.81□□□□□ -0.36
VMP1-207ENST00000588131 ARL6IP4Q66PJ3 421 aaKnown RBP12.81□□□□□ -0.36
VMP1-207ENST00000588131 USP49Q70CQ1 688 aa12.81□□□□□ -0.36
VMP1-207ENST00000588131 ZNF579Q8NAF0 562 aaKnown RBP12.81□□□□□ -0.36
VMP1-207ENST00000588131 HAS1Q92839 578 aa12.81□□□□□ -0.36
VMP1-207ENST00000588131 MMP19Q99542 508 aa12.81□□□□□ -0.36
VMP1-207ENST00000588131 KCNMB3Q9NPA1 279 aa12.81□□□□□ -0.36
VMP1-207ENST00000588131 LRRC37A2A6NM11 1700 aa12.81□□□□□ -0.36
VMP1-207ENST00000588131 FAM237AA0A1B0GTK4 181 aa12.8□□□□□ -0.36
VMP1-207ENST00000588131 POTEB2H3BUK9 544 aa12.8□□□□□ -0.36
VMP1-207ENST00000588131 NR1I2O75469 434 aa12.8□□□□□ -0.36
VMP1-207ENST00000588131 PGK2P07205 417 aa12.8□□□□□ -0.36
VMP1-207ENST00000588131 MYCLP12524 364 aaPredicted RBP12.8□□□□□ -0.36
VMP1-207ENST00000588131 PFKFB1P16118 471 aa12.8□□□□□ -0.36
VMP1-207ENST00000588131 TXKP42681 527 aa12.8□□□□□ -0.36
VMP1-207ENST00000588131 NDUFA8P51970 172 aa12.8□□□□□ -0.36
VMP1-207ENST00000588131 CCNA1P78396 465 aa12.8□□□□□ -0.36
VMP1-207ENST00000588131 CRHR2Q13324 411 aa12.8□□□□□ -0.36
VMP1-207ENST00000588131 C17orf99Q6UX52 265 aa12.8□□□□□ -0.36
VMP1-207ENST00000588131 DTHD1Q6ZMT9 781 aa12.8□□□□□ -0.36
VMP1-207ENST00000588131 FAM133AQ8N9E0 248 aa12.8□□□□□ -0.36
VMP1-207ENST00000588131 ENGASEQ8NFI3 743 aa12.8□□□□□ -0.36
VMP1-207ENST00000588131 ETNPPLQ8TBG4 499 aa12.8□□□□□ -0.36
VMP1-207ENST00000588131 FGD4Q96M96 766 aa12.8□□□□□ -0.36
VMP1-207ENST00000588131 MXRA8Q9BRK3 442 aa12.8□□□□□ -0.36
VMP1-207ENST00000588131 TMEM63CQ9P1W3 806 aa12.8□□□□□ -0.36
VMP1-207ENST00000588131 HPSEQ9Y251 543 aa12.8□□□□□ -0.36
VMP1-207ENST00000588131 UBIAD1Q9Y5Z9 338 aa12.8□□□□□ -0.36
VMP1-207ENST00000588131 DNAJC25-GNG10A0A024R161 153 aa12.79□□□□□ -0.36
VMP1-207ENST00000588131 PP2D1A8MPX8 630 aa12.79□□□□□ -0.36
VMP1-207ENST00000588131 MSH4O15457 936 aa12.79□□□□□ -0.36
VMP1-207ENST00000588131 TLR2O60603 784 aa12.79□□□□□ -0.36
VMP1-207ENST00000588131 NR3C2P08235 984 aa12.79□□□□□ -0.36
VMP1-207ENST00000588131 ARP10275 920 aa12.79□□□□□ -0.36
VMP1-207ENST00000588131 FCER1AP12319 257 aa12.79□□□□□ -0.36
VMP1-207ENST00000588131 ITGB5P18084 799 aa12.79□□□□□ -0.36
VMP1-207ENST00000588131 CCND2P30279 289 aa12.79□□□□□ -0.36
VMP1-207ENST00000588131 LONP1P36776 959 aaKnown RBP12.79□□□□□ -0.36
VMP1-207ENST00000588131 TECP42680 631 aa12.79□□□□□ -0.36
VMP1-207ENST00000588131 ALDH5A1P51649 535 aaPredicted RBP12.79□□□□□ -0.36
VMP1-207ENST00000588131 KCTD2Q14681 263 aa12.79□□□□□ -0.36
VMP1-207ENST00000588131 CEP55Q53EZ4 464 aa12.79□□□□□ -0.36
VMP1-207ENST00000588131 CAVIN1Q6NZI2 390 aaKnown RBP12.79□□□□□ -0.36
VMP1-207ENST00000588131 PLA2G4DQ86XP0 818 aa12.79□□□□□ -0.36
VMP1-207ENST00000588131 NSUN6Q8TEA1 469 aaKnown RBP12.79□□□□□ -0.36
VMP1-207ENST00000588131 EPSTI1Q96J88 318 aa12.79□□□□□ -0.36
VMP1-207ENST00000588131 ZFYVE28Q9HCC9 887 aa12.79□□□□□ -0.36
VMP1-207ENST00000588131 ZNFX1Q9P2E3 1918 aaKnown RBP12.78□□□□□ -0.36
VMP1-207ENST00000588131 THSD7BQ9C0I4 1608 aa12.78□□□□□ -0.36
VMP1-207ENST00000588131 MEIS1O00470 390 aa12.78□□□□□ -0.36
VMP1-207ENST00000588131 TBX3O15119 743 aa12.78□□□□□ -0.36
VMP1-207ENST00000588131 CDC25AP30304 524 aa12.78□□□□□ -0.36
VMP1-207ENST00000588131 FXR2P51116 673 aaKnown RBP eCLIP12.78□□□□□ -0.36
VMP1-207ENST00000588131 FAM160A1Q05DH4 1040 aa12.78□□□□□ -0.36
VMP1-207ENST00000588131 SNW1Q13573 536 aaKnown RBP12.78□□□□□ -0.36
VMP1-207ENST00000588131 CCDC73Q6ZRK6 1079 aa12.78□□□□□ -0.36
VMP1-207ENST00000588131 GPR142Q7Z601 462 aa12.78□□□□□ -0.36
VMP1-207ENST00000588131 VSIG10LQ86VR7 867 aa12.78□□□□□ -0.36
VMP1-207ENST00000588131 FMR1NBQ8N0W7 255 aaPredicted RBP12.78□□□□□ -0.36
VMP1-207ENST00000588131 DNERQ8NFT8 737 aa12.78□□□□□ -0.36
VMP1-207ENST00000588131 SYMPKQ92797 1274 aaKnown RBP12.78□□□□□ -0.36
VMP1-207ENST00000588131 WDR11Q9BZH6 1224 aa12.78□□□□□ -0.36
VMP1-207ENST00000588131 TTC12Q9H892 705 aaPredicted RBP12.78□□□□□ -0.36
VMP1-207ENST00000588131 JADE2Q9NQC1 790 aa12.78□□□□□ -0.36
VMP1-207ENST00000588131 DACT1Q9NYF0 836 aa12.78□□□□□ -0.36
VMP1-207ENST00000588131 ZNF236Q9UL36 1845 aa12.78□□□□□ -0.36
VMP1-207ENST00000588131 PLXNA1Q9UIW2 1896 aa12.77□□□□□ -0.37
VMP1-207ENST00000588131 A0A087X0B3 334 aa12.77□□□□□ -0.37
VMP1-207ENST00000588131 POTEMA6NI47 508 aa12.77□□□□□ -0.37
VMP1-207ENST00000588131 CA12O43570 354 aa12.77□□□□□ -0.37
VMP1-207ENST00000588131 MARCH6O60337 910 aa12.77□□□□□ -0.37
VMP1-207ENST00000588131 ECM2O94769 699 aaPredicted RBP12.77□□□□□ -0.37
VMP1-207ENST00000588131 VEGFBP49765 207 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms