RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 SLC9C1Q4G0N8 1177 aa12.22□□□□□ -0.45
SMARCA4-213ENST00000587988 COL13A1Q5TAT6 717 aaPredicted RBP12.22□□□□□ -0.45
SMARCA4-213ENST00000587988 MAP3K21Q5TCX8 1036 aa12.22□□□□□ -0.45
SMARCA4-213ENST00000587988 PCNX4Q63HM2 1172 aa12.22□□□□□ -0.45
SMARCA4-213ENST00000587988 MCTP2Q6DN12 878 aa12.22□□□□□ -0.45
SMARCA4-213ENST00000587988 MCTP1Q6DN14 999 aa12.22□□□□□ -0.45
SMARCA4-213ENST00000587988 TAPT1Q6NXT6 567 aa12.22□□□□□ -0.45
SMARCA4-213ENST00000587988 KRT25Q7Z3Z0 450 aa12.22□□□□□ -0.45
SMARCA4-213ENST00000587988 FBXO16Q8IX29 292 aaPredicted RBP12.22□□□□□ -0.45
SMARCA4-213ENST00000587988 CYP2W1Q8TAV3 490 aa12.22□□□□□ -0.45
SMARCA4-213ENST00000587988 FOXP1Q9H334 677 aaPredicted RBP12.22□□□□□ -0.45
SMARCA4-213ENST00000587988 EHMT1Q9H9B1 1298 aa12.22□□□□□ -0.45
SMARCA4-213ENST00000587988 PDGFCQ9NRA1 345 aa12.22□□□□□ -0.45
SMARCA4-213ENST00000587988 MTMR6Q9Y217 621 aa12.22□□□□□ -0.45
SMARCA4-213ENST00000587988 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.21□□□□□ -0.45
SMARCA4-213ENST00000587988 B4DLN1 442 aa12.21□□□□□ -0.45
SMARCA4-213ENST00000587988 WNT7AO00755 349 aa12.21□□□□□ -0.45
SMARCA4-213ENST00000587988 STX6O43752 255 aa12.21□□□□□ -0.45
SMARCA4-213ENST00000587988 MYCP01106 439 aaPredicted RBP12.21□□□□□ -0.45
SMARCA4-213ENST00000587988 CYP3A4P08684 503 aa12.21□□□□□ -0.45
SMARCA4-213ENST00000587988 PDCP20941 246 aa12.21□□□□□ -0.45
SMARCA4-213ENST00000587988 U2AF2P26368 475 aaKnown RBP eCLIP12.21□□□□□ -0.45
SMARCA4-213ENST00000587988 PKP1Q13835 747 aa12.21□□□□□ -0.45
SMARCA4-213ENST00000587988 NONOQ15233 471 aaKnown RBP eCLIP12.21□□□□□ -0.45
SMARCA4-213ENST00000587988 MTFR1Q15390 333 aa12.21□□□□□ -0.45
SMARCA4-213ENST00000587988 TMEM63BQ5T3F8 832 aa12.21□□□□□ -0.45
SMARCA4-213ENST00000587988 SEPT14Q6ZU15 432 aa12.21□□□□□ -0.45
SMARCA4-213ENST00000587988 MPHOSPH6Q99547 160 aaKnown RBP12.21□□□□□ -0.45
SMARCA4-213ENST00000587988 ABHD16BQ9H3Z7 469 aa12.21□□□□□ -0.45
SMARCA4-213ENST00000587988 ZHX1Q9UKY1 873 aaPredicted RBP12.21□□□□□ -0.45
SMARCA4-213ENST00000587988 UBIAD1Q9Y5Z9 338 aa12.21□□□□□ -0.45
SMARCA4-213ENST00000587988 KIAA1217Q5T5P2 1943 aa12.21□□□□□ -0.46
SMARCA4-213ENST00000587988 FAM86B1E9PN63 330 aa12.2□□□□□ -0.46
SMARCA4-213ENST00000587988 ADCY6O43306 1168 aa12.2□□□□□ -0.46
SMARCA4-213ENST00000587988 EIF3JO75822 258 aaKnown RBP12.2□□□□□ -0.46
SMARCA4-213ENST00000587988 ARIH2O95376 493 aa12.2□□□□□ -0.46
SMARCA4-213ENST00000587988 FAM86B2P0C5J1 330 aa12.2□□□□□ -0.46
SMARCA4-213ENST00000587988 ITGB5P18084 799 aa12.2□□□□□ -0.46
SMARCA4-213ENST00000587988 PTGS1P23219 599 aa12.2□□□□□ -0.46
SMARCA4-213ENST00000587988 GNL2Q13823 731 aaKnown RBP12.2□□□□□ -0.46
SMARCA4-213ENST00000587988 FERMT3Q86UX7 667 aa12.2□□□□□ -0.46
SMARCA4-213ENST00000587988 NOSTRINQ8IVI9 506 aa12.2□□□□□ -0.46
SMARCA4-213ENST00000587988 MXRA8Q9BRK3 442 aa12.2□□□□□ -0.46
SMARCA4-213ENST00000587988 WDR11Q9BZH6 1224 aa12.2□□□□□ -0.46
SMARCA4-213ENST00000587988 VTA1Q9NP79 307 aa12.2□□□□□ -0.46
SMARCA4-213ENST00000587988 CNPY2Q9Y2B0 182 aa12.2□□□□□ -0.46
SMARCA4-213ENST00000587988 HTTP42858 3142 aa12.19□□□□□ -0.46
SMARCA4-213ENST00000587988 IGLV3-22A0A075B6J6 115 aa12.19□□□□□ -0.46
SMARCA4-213ENST00000587988 RBM47A0AV96 593 aaKnown RBP12.19□□□□□ -0.46
SMARCA4-213ENST00000587988 STAM2O75886 525 aa12.19□□□□□ -0.46
SMARCA4-213ENST00000587988 TDP2O95551 362 aa12.19□□□□□ -0.46
SMARCA4-213ENST00000587988 CNGA1P29973 690 aa12.19□□□□□ -0.46
SMARCA4-213ENST00000587988 CIITAP33076 1130 aa12.19□□□□□ -0.46
SMARCA4-213ENST00000587988 ZNF76P36508 570 aa12.19□□□□□ -0.46
SMARCA4-213ENST00000587988 ADCYAP1R1P41586 468 aa12.19□□□□□ -0.46
SMARCA4-213ENST00000587988 USP11P51784 963 aa12.19□□□□□ -0.46
SMARCA4-213ENST00000587988 SEMA3FQ13275 785 aa12.19□□□□□ -0.46
SMARCA4-213ENST00000587988 LETM2Q2VYF4 491 aa12.19□□□□□ -0.46
SMARCA4-213ENST00000587988 CCDC144BQ3MJ40 725 aa12.19□□□□□ -0.46
SMARCA4-213ENST00000587988 FOXD4L5Q5VV16 416 aaPredicted RBP12.19□□□□□ -0.46
SMARCA4-213ENST00000587988 ANO1Q5XXA6 986 aa12.19□□□□□ -0.46
SMARCA4-213ENST00000587988 XRRA1Q6P2D8 792 aa12.19□□□□□ -0.46
SMARCA4-213ENST00000587988 NEK8Q86SG6 692 aa12.19□□□□□ -0.46
SMARCA4-213ENST00000587988 FOXD4L4Q8WXT5 416 aaPredicted RBP12.19□□□□□ -0.46
SMARCA4-213ENST00000587988 LENG1Q96BZ8 264 aaPredicted RBP12.19□□□□□ -0.46
SMARCA4-213ENST00000587988 ARMC5Q96C12 935 aa12.19□□□□□ -0.46
SMARCA4-213ENST00000587988 ZNF333Q96JL9 665 aa12.19□□□□□ -0.46
SMARCA4-213ENST00000587988 INPP4AQ96PE3 977 aaPredicted RBP12.19□□□□□ -0.46
SMARCA4-213ENST00000587988 UIMC1Q96RL1 719 aa12.19□□□□□ -0.46
SMARCA4-213ENST00000587988 UNC93B1Q9H1C4 597 aa12.19□□□□□ -0.46
SMARCA4-213ENST00000587988 JADE2Q9NQC1 790 aa12.19□□□□□ -0.46
SMARCA4-213ENST00000587988 NRBP1Q9UHY1 535 aa12.19□□□□□ -0.46
SMARCA4-213ENST00000587988 MEIS1O00470 390 aa12.18□□□□□ -0.46
SMARCA4-213ENST00000587988 ARP10275 920 aa12.18□□□□□ -0.46
SMARCA4-213ENST00000587988 CCL5P13501 91 aa12.18□□□□□ -0.46
SMARCA4-213ENST00000587988 SMPD1P17405 629 aa12.18□□□□□ -0.46
SMARCA4-213ENST00000587988 ATP2B1P20020 1258 aa12.18□□□□□ -0.46
SMARCA4-213ENST00000587988 ICAM3P32942 547 aa12.18□□□□□ -0.46
SMARCA4-213ENST00000587988 DDIT3P35638 169 aa12.18□□□□□ -0.46
SMARCA4-213ENST00000587988 TOB1P50616 345 aaPredicted RBP12.18□□□□□ -0.46
SMARCA4-213ENST00000587988 SP2Q02086 613 aa12.18□□□□□ -0.46
SMARCA4-213ENST00000587988 RESTQ13127 1097 aa12.18□□□□□ -0.46
SMARCA4-213ENST00000587988 NBR1Q14596 966 aa12.18□□□□□ -0.46
SMARCA4-213ENST00000587988 LY6KQ17RY6 165 aa12.18□□□□□ -0.46
SMARCA4-213ENST00000587988 CEP55Q53EZ4 464 aa12.18□□□□□ -0.46
SMARCA4-213ENST00000587988 GJC2Q5T442 439 aaPredicted RBP12.18□□□□□ -0.46
SMARCA4-213ENST00000587988 CCDC62Q6P9F0 684 aa12.18□□□□□ -0.46
SMARCA4-213ENST00000587988 COPS5Q92905 334 aa12.18□□□□□ -0.46
SMARCA4-213ENST00000587988 LENG9Q96B70 501 aa12.18□□□□□ -0.46
SMARCA4-213ENST00000587988 BCAS3Q9H6U6 928 aa12.18□□□□□ -0.46
SMARCA4-213ENST00000587988 HMX1Q9NP08 348 aaPredicted RBP12.18□□□□□ -0.46
SMARCA4-213ENST00000587988 ZDHHC9Q9Y397 364 aa12.18□□□□□ -0.46
SMARCA4-213ENST00000587988 CYP3A7-CYP3A51PA0A087WV96 503 aa12.17□□□□□ -0.46
SMARCA4-213ENST00000587988 POTEFA5A3E0 1075 aa12.17□□□□□ -0.46
SMARCA4-213ENST00000587988 SPATA31C2B4DYI2 1134 aa12.17□□□□□ -0.46
SMARCA4-213ENST00000587988 SEPT4O43236 478 aa12.17□□□□□ -0.46
SMARCA4-213ENST00000587988 SLC37A4O43826 429 aa12.17□□□□□ -0.46
SMARCA4-213ENST00000587988 CCNT1O60563 726 aaKnown RBP12.17□□□□□ -0.46
SMARCA4-213ENST00000587988 ATP9AO75110 1047 aa12.17□□□□□ -0.46
SMARCA4-213ENST00000587988 AKR1A1P14550 325 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms