RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 KLRF2D3W0D1 207 aa16.49■□□□□ 0.23
ERCC1-205ENST00000587888 EIF3JO75822 258 aaKnown RBP16.49■□□□□ 0.23
ERCC1-205ENST00000587888 NR3C2P08235 984 aa16.49■□□□□ 0.23
ERCC1-205ENST00000587888 MYCLP12524 364 aaPredicted RBP16.49■□□□□ 0.23
ERCC1-205ENST00000587888 DGKDQ16760 1214 aa16.49■□□□□ 0.23
ERCC1-205ENST00000587888 CCDC155Q8N6L0 562 aa16.49■□□□□ 0.23
ERCC1-205ENST00000587888 IL27Q8NEV9 243 aa16.49■□□□□ 0.23
ERCC1-205ENST00000587888 PHOSPHO2Q8TCD6 241 aa16.49■□□□□ 0.23
ERCC1-205ENST00000587888 KAT2BQ92831 832 aa16.49■□□□□ 0.23
ERCC1-205ENST00000587888 SLC9A7Q96T83 725 aa16.49■□□□□ 0.23
ERCC1-205ENST00000587888 TSPYL2Q9H2G4 693 aaPredicted RBP16.49■□□□□ 0.23
ERCC1-205ENST00000587888 PXMP2Q9NR77 195 aa16.49■□□□□ 0.23
ERCC1-205ENST00000587888 MRVI1Q9Y6F6 885 aa16.49■□□□□ 0.23
ERCC1-205ENST00000587888 PRUNE2Q8WUY3 3088 aa16.48■□□□□ 0.23
ERCC1-205ENST00000587888 SORBS3O60504 671 aa16.48■□□□□ 0.23
ERCC1-205ENST00000587888 SKIV2LQ15477 1246 aaKnown RBP16.48■□□□□ 0.23
ERCC1-205ENST00000587888 CYB5R4Q7L1T6 521 aa16.48■□□□□ 0.23
ERCC1-205ENST00000587888 HERC6Q8IVU3 1022 aa16.48■□□□□ 0.23
ERCC1-205ENST00000587888 DHX37Q8IY37 1157 aaKnown RBP16.48■□□□□ 0.23
ERCC1-205ENST00000587888 C7orf31Q8N865 590 aa16.48■□□□□ 0.23
ERCC1-205ENST00000587888 ADAMTS19Q8TE59 1207 aa16.48■□□□□ 0.23
ERCC1-205ENST00000587888 CTAGE1Q96RT6 745 aa16.48■□□□□ 0.23
ERCC1-205ENST00000587888 IL25Q9H293 177 aa16.48■□□□□ 0.23
ERCC1-205ENST00000587888 HDAC6Q9UBN7 1215 aa16.48■□□□□ 0.23
ERCC1-205ENST00000587888 PCDHA1Q9Y5I3 950 aa16.48■□□□□ 0.23
ERCC1-205ENST00000587888 CDH23Q9H251 3354 aa16.47■□□□□ 0.23
ERCC1-205ENST00000587888 LAMA4Q16363 1823 aa16.47■□□□□ 0.23
ERCC1-205ENST00000587888 RBAK-RBAKDNI3L0D1 243 aa16.47■□□□□ 0.23
ERCC1-205ENST00000587888 HOXA13P31271 388 aaPredicted RBP16.47■□□□□ 0.23
ERCC1-205ENST00000587888 KCNJ6P48051 423 aa16.47■□□□□ 0.23
ERCC1-205ENST00000587888 PSEN2P49810 448 aa16.47■□□□□ 0.23
ERCC1-205ENST00000587888 LAMC2Q13753 1193 aa16.47■□□□□ 0.23
ERCC1-205ENST00000587888 CAGE1Q8TC20 777 aa16.47■□□□□ 0.23
ERCC1-205ENST00000587888 ARNTL2Q8WYA1 636 aa16.47■□□□□ 0.23
ERCC1-205ENST00000587888 ZFP91Q96JP5 570 aaPredicted RBP16.47■□□□□ 0.23
ERCC1-205ENST00000587888 MAD2L2Q9UI95 211 aa16.47■□□□□ 0.23
ERCC1-205ENST00000587888 TRIP12Q14669 1992 aaPredicted RBP16.47■□□□□ 0.23
ERCC1-205ENST00000587888 MYH6P13533 1939 aa16.47■□□□□ 0.23
ERCC1-205ENST00000587888 EPOPA6NHQ4 379 aa16.46■□□□□ 0.23
ERCC1-205ENST00000587888 OPLAHO14841 1288 aa16.46■□□□□ 0.23
ERCC1-205ENST00000587888 GTPBP6O43824 516 aaPredicted RBP16.46■□□□□ 0.23
ERCC1-205ENST00000587888 PPP1R11O60927 126 aaPredicted RBP16.46■□□□□ 0.23
ERCC1-205ENST00000587888 ARHGEF15O94989 841 aa16.46■□□□□ 0.23
ERCC1-205ENST00000587888 ZNF286BP0CG31 522 aa16.46■□□□□ 0.23
ERCC1-205ENST00000587888 SELPP16109 830 aa16.46■□□□□ 0.23
ERCC1-205ENST00000587888 HSD17B4P51659 736 aa16.46■□□□□ 0.23
ERCC1-205ENST00000587888 TAP1Q03518 808 aa16.46■□□□□ 0.23
ERCC1-205ENST00000587888 MFSD10Q14728 455 aa16.46■□□□□ 0.23
ERCC1-205ENST00000587888 GPNMBQ14956 572 aa16.46■□□□□ 0.23
ERCC1-205ENST00000587888 SEC23AQ15436 765 aa16.46■□□□□ 0.23
ERCC1-205ENST00000587888 KRT40Q6A162 431 aa16.46■□□□□ 0.23
ERCC1-205ENST00000587888 LRRC8DQ7L1W4 858 aa16.46■□□□□ 0.23
ERCC1-205ENST00000587888 TMCO2Q7Z6W1 182 aaPredicted RBP16.46■□□□□ 0.23
ERCC1-205ENST00000587888 SESTD1Q86VW0 696 aa16.46■□□□□ 0.23
ERCC1-205ENST00000587888 AFAP1L1Q8TED9 768 aa16.46■□□□□ 0.23
ERCC1-205ENST00000587888 DHX38Q92620 1227 aaKnown RBP16.46■□□□□ 0.23
ERCC1-205ENST00000587888 ZBED2Q9BTP6 218 aa16.46■□□□□ 0.23
ERCC1-205ENST00000587888 GTF2IRD1Q9UHL9 959 aa16.46■□□□□ 0.23
ERCC1-205ENST00000587888 MTCH2Q9Y6C9 303 aa16.46■□□□□ 0.23
ERCC1-205ENST00000587888 KIAA1217Q5T5P2 1943 aa16.46■□□□□ 0.23
ERCC1-205ENST00000587888 ZBTB5O15062 677 aa16.45■□□□□ 0.22
ERCC1-205ENST00000587888 TLL1O43897 1013 aa16.45■□□□□ 0.22
ERCC1-205ENST00000587888 BAIAP3O94812 1187 aa16.45■□□□□ 0.22
ERCC1-205ENST00000587888 CKBP12277 381 aa16.45■□□□□ 0.22
ERCC1-205ENST00000587888 ZNF200P98182 395 aaPredicted RBP16.45■□□□□ 0.22
ERCC1-205ENST00000587888 TFF2Q03403 129 aa16.45■□□□□ 0.22
ERCC1-205ENST00000587888 TRDNQ13061 729 aa16.45■□□□□ 0.22
ERCC1-205ENST00000587888 KIAA0753Q2KHM9 967 aa16.45■□□□□ 0.22
ERCC1-205ENST00000587888 HOMER1Q86YM7 354 aa16.45■□□□□ 0.22
ERCC1-205ENST00000587888 PPTC7Q8NI37 304 aa16.45■□□□□ 0.22
ERCC1-205ENST00000587888 KATNAL1Q9BW62 490 aa16.45■□□□□ 0.22
ERCC1-205ENST00000587888 MYH7BA7E2Y1 1941 aa16.45■□□□□ 0.22
ERCC1-205ENST00000587888 PALM3A6NDB9 673 aaPredicted RBP16.44■□□□□ 0.22
ERCC1-205ENST00000587888 IFIT3O14879 490 aaKnown RBP16.44■□□□□ 0.22
ERCC1-205ENST00000587888 RGS20O76081 388 aa16.44■□□□□ 0.22
ERCC1-205ENST00000587888 PGM5Q15124 567 aa16.44■□□□□ 0.22
ERCC1-205ENST00000587888 STOX1Q6ZVD7 989 aa16.44■□□□□ 0.22
ERCC1-205ENST00000587888 FCHSD1Q86WN1 690 aa16.44■□□□□ 0.22
ERCC1-205ENST00000587888 EMID1Q96A84 441 aaPredicted RBP16.44■□□□□ 0.22
ERCC1-205ENST00000587888 MTMR8Q96EF0 704 aa16.44■□□□□ 0.22
ERCC1-205ENST00000587888 SPATA33Q96N06 139 aa16.44■□□□□ 0.22
ERCC1-205ENST00000587888 PIGSQ96S52 555 aa16.44■□□□□ 0.22
ERCC1-205ENST00000587888 UHRF1Q96T88 793 aaPredicted RBP16.44■□□□□ 0.22
ERCC1-205ENST00000587888 PDCD2LQ9BRP1 358 aa16.44■□□□□ 0.22
ERCC1-205ENST00000587888 MAP3K20Q9NYL2 800 aaKnown RBP16.44■□□□□ 0.22
ERCC1-205ENST00000587888 NBNO60934 754 aa16.43■□□□□ 0.22
ERCC1-205ENST00000587888 GGPS1O95749 300 aa16.43■□□□□ 0.22
ERCC1-205ENST00000587888 PDE4AP27815 886 aa16.43■□□□□ 0.22
ERCC1-205ENST00000587888 WDR5P61964 334 aaKnown RBP16.43■□□□□ 0.22
ERCC1-205ENST00000587888 DEFB103AP81534 67 aa16.43■□□□□ 0.22
ERCC1-205ENST00000587888 SP2Q02086 613 aa16.43■□□□□ 0.22
ERCC1-205ENST00000587888 PTH1RQ03431 593 aa16.43■□□□□ 0.22
ERCC1-205ENST00000587888 TCTN1Q2MV58 587 aa16.43■□□□□ 0.22
ERCC1-205ENST00000587888 CELF3Q5SZQ8 465 aaKnown RBP16.43■□□□□ 0.22
ERCC1-205ENST00000587888 MYSM1Q5VVJ2 828 aa16.43■□□□□ 0.22
ERCC1-205ENST00000587888 CNKSR3Q6P9H4 555 aa16.43■□□□□ 0.22
ERCC1-205ENST00000587888 SPRED2Q7Z698 418 aa16.43■□□□□ 0.22
ERCC1-205ENST00000587888 VSIG10LQ86VR7 867 aa16.43■□□□□ 0.22
ERCC1-205ENST00000587888 SENP2Q9HC62 589 aa16.43■□□□□ 0.22
ERCC1-205ENST00000587888 TET1Q8NFU7 2136 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms