RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 COL9A1P20849 921 aa16.42■□□□□ 0.22
DNMT1-213ENST00000587604 TAP1Q03518 808 aa16.42■□□□□ 0.22
DNMT1-213ENST00000587604 AAMPQ13685 434 aa16.42■□□□□ 0.22
DNMT1-213ENST00000587604 GDF6Q6KF10 455 aaPredicted RBP16.42■□□□□ 0.22
DNMT1-213ENST00000587604 SMC5Q8IY18 1101 aa16.42■□□□□ 0.22
DNMT1-213ENST00000587604 KAT2BQ92831 832 aa16.42■□□□□ 0.22
DNMT1-213ENST00000587604 CTAGE1Q96RT6 745 aa16.42■□□□□ 0.22
DNMT1-213ENST00000587604 OSBPL3Q9H4L5 887 aa16.42■□□□□ 0.22
DNMT1-213ENST00000587604 ZSWIM5Q9P217 1185 aa16.42■□□□□ 0.22
DNMT1-213ENST00000587604 MRPL11Q9Y3B7 192 aaKnown RBP16.42■□□□□ 0.22
DNMT1-213ENST00000587604 EPOPA6NHQ4 379 aa16.41■□□□□ 0.22
DNMT1-213ENST00000587604 B4E1Z4 1266 aa16.41■□□□□ 0.22
DNMT1-213ENST00000587604 EIF3JO75822 258 aaKnown RBP16.41■□□□□ 0.22
DNMT1-213ENST00000587604 PARNO95453 639 aaKnown RBP16.41■□□□□ 0.22
DNMT1-213ENST00000587604 PARP1P09874 1014 aaKnown RBP16.41■□□□□ 0.22
DNMT1-213ENST00000587604 TFF2Q03403 129 aa16.41■□□□□ 0.22
DNMT1-213ENST00000587604 SKIV2LQ15477 1246 aaKnown RBP16.41■□□□□ 0.22
DNMT1-213ENST00000587604 DGKDQ16760 1214 aa16.41■□□□□ 0.22
DNMT1-213ENST00000587604 QRICH1Q2TAL8 776 aa16.41■□□□□ 0.22
DNMT1-213ENST00000587604 ARHGEF16Q5VV41 709 aa16.41■□□□□ 0.22
DNMT1-213ENST00000587604 B4GALNT3Q6L9W6 998 aa16.41■□□□□ 0.22
DNMT1-213ENST00000587604 CWC27Q6UX04 472 aaKnown RBP16.41■□□□□ 0.22
DNMT1-213ENST00000587604 CHST3Q7LGC8 479 aa16.41■□□□□ 0.22
DNMT1-213ENST00000587604 FBXO11Q86XK2 927 aa16.41■□□□□ 0.22
DNMT1-213ENST00000587604 PLEKHM2Q8IWE5 1019 aa16.41■□□□□ 0.22
DNMT1-213ENST00000587604 ENAHQ8N8S7 591 aaPredicted RBP16.41■□□□□ 0.22
DNMT1-213ENST00000587604 ARNTL2Q8WYA1 636 aa16.41■□□□□ 0.22
DNMT1-213ENST00000587604 EMID1Q96A84 441 aaPredicted RBP16.41■□□□□ 0.22
DNMT1-213ENST00000587604 RWDD1Q9H446 243 aaPredicted RBP16.41■□□□□ 0.22
DNMT1-213ENST00000587604 DDX41Q9UJV9 622 aaKnown RBP16.41■□□□□ 0.22
DNMT1-213ENST00000587604 SELPP16109 830 aa16.4■□□□□ 0.22
DNMT1-213ENST00000587604 KCNJ6P48051 423 aa16.4■□□□□ 0.22
DNMT1-213ENST00000587604 RBL2Q08999 1139 aa16.4■□□□□ 0.22
DNMT1-213ENST00000587604 GPNMBQ14956 572 aa16.4■□□□□ 0.22
DNMT1-213ENST00000587604 LRRC8DQ7L1W4 858 aa16.4■□□□□ 0.22
DNMT1-213ENST00000587604 CHD1LQ86WJ1 897 aa16.4■□□□□ 0.22
DNMT1-213ENST00000587604 JMJD4Q9H9V9 463 aa16.4■□□□□ 0.22
DNMT1-213ENST00000587604 VAT1LQ9HCJ6 419 aa16.4■□□□□ 0.22
DNMT1-213ENST00000587604 DIAPH3Q9NSV4 1193 aa16.4■□□□□ 0.22
DNMT1-213ENST00000587604 GTF2IRD1Q9UHL9 959 aa16.4■□□□□ 0.22
DNMT1-213ENST00000587604 PTPRSQ13332 1948 aa16.4■□□□□ 0.22
DNMT1-213ENST00000587604 HIP1O00291 1037 aa16.39■□□□□ 0.21
DNMT1-213ENST00000587604 TLL1O43897 1013 aa16.39■□□□□ 0.21
DNMT1-213ENST00000587604 DHX16O60231 1041 aaKnown RBP16.39■□□□□ 0.21
DNMT1-213ENST00000587604 ARHGEF15O94989 841 aa16.39■□□□□ 0.21
DNMT1-213ENST00000587604 NR3C2P08235 984 aa16.39■□□□□ 0.21
DNMT1-213ENST00000587604 EIF2AK2P19525 551 aaKnown RBP16.39■□□□□ 0.21
DNMT1-213ENST00000587604 WDR5P61964 334 aaKnown RBP16.39■□□□□ 0.21
DNMT1-213ENST00000587604 LAMC2Q13753 1193 aa16.39■□□□□ 0.21
DNMT1-213ENST00000587604 IMMTQ16891 758 aaKnown RBP16.39■□□□□ 0.21
DNMT1-213ENST00000587604 C7orf31Q8N865 590 aa16.39■□□□□ 0.21
DNMT1-213ENST00000587604 DHX38Q92620 1227 aaKnown RBP16.39■□□□□ 0.21
DNMT1-213ENST00000587604 NECAB3Q96P71 396 aaPredicted RBP16.39■□□□□ 0.21
DNMT1-213ENST00000587604 DSCC1Q9BVC3 393 aa16.39■□□□□ 0.21
DNMT1-213ENST00000587604 KATNAL1Q9BW62 490 aa16.39■□□□□ 0.21
DNMT1-213ENST00000587604 KRT23Q9C075 422 aa16.39■□□□□ 0.21
DNMT1-213ENST00000587604 PXMP2Q9NR77 195 aa16.39■□□□□ 0.21
DNMT1-213ENST00000587604 HDAC6Q9UBN7 1215 aa16.39■□□□□ 0.21
DNMT1-213ENST00000587604 CTNNA3Q9UI47 895 aa16.39■□□□□ 0.21
DNMT1-213ENST00000587604 COG5Q9UP83 839 aa16.39■□□□□ 0.21
DNMT1-213ENST00000587604 CFBP00751 764 aa16.38■□□□□ 0.21
DNMT1-213ENST00000587604 CXCL10P02778 98 aa16.38■□□□□ 0.21
DNMT1-213ENST00000587604 CKBP12277 381 aa16.38■□□□□ 0.21
DNMT1-213ENST00000587604 PSEN2P49810 448 aa16.38■□□□□ 0.21
DNMT1-213ENST00000587604 HSD17B4P51659 736 aa16.38■□□□□ 0.21
DNMT1-213ENST00000587604 KCNQ1P51787 676 aa16.38■□□□□ 0.21
DNMT1-213ENST00000587604 NUCB1Q02818 461 aa16.38■□□□□ 0.21
DNMT1-213ENST00000587604 KRT40Q6A162 431 aa16.38■□□□□ 0.21
DNMT1-213ENST00000587604 CNKSR3Q6P9H4 555 aa16.38■□□□□ 0.21
DNMT1-213ENST00000587604 PPTC7Q8NI37 304 aa16.38■□□□□ 0.21
DNMT1-213ENST00000587604 AMNQ9BXJ7 453 aa16.38■□□□□ 0.21
DNMT1-213ENST00000587604 CNNM2Q9H8M5 875 aa16.38■□□□□ 0.21
DNMT1-213ENST00000587604 MAP3K20Q9NYL2 800 aaKnown RBP16.38■□□□□ 0.21
DNMT1-213ENST00000587604 MRVI1Q9Y6F6 885 aa16.38■□□□□ 0.21
DNMT1-213ENST00000587604 BAZ2BQ9UIF8 2168 aaKnown RBP16.38■□□□□ 0.21
DNMT1-213ENST00000587604 HAS3O00219 553 aa16.37■□□□□ 0.21
DNMT1-213ENST00000587604 NBNO60934 754 aa16.37■□□□□ 0.21
DNMT1-213ENST00000587604 F2P00734 622 aa16.37■□□□□ 0.21
DNMT1-213ENST00000587604 GHRHRQ02643 423 aa16.37■□□□□ 0.21
DNMT1-213ENST00000587604 PTK7Q13308 1070 aa16.37■□□□□ 0.21
DNMT1-213ENST00000587604 GRB10Q13322 594 aa16.37■□□□□ 0.21
DNMT1-213ENST00000587604 MFSD10Q14728 455 aa16.37■□□□□ 0.21
DNMT1-213ENST00000587604 DHX37Q8IY37 1157 aaKnown RBP16.37■□□□□ 0.21
DNMT1-213ENST00000587604 UBAC1Q9BSL1 405 aa16.37■□□□□ 0.21
DNMT1-213ENST00000587604 ALG1Q9BT22 464 aa16.37■□□□□ 0.21
DNMT1-213ENST00000587604 ZBED2Q9BTP6 218 aa16.37■□□□□ 0.21
DNMT1-213ENST00000587604 ABHD14A-ACY1A0A1B0GW23 586 aa16.36■□□□□ 0.21
DNMT1-213ENST00000587604 OPLAHO14841 1288 aa16.36■□□□□ 0.21
DNMT1-213ENST00000587604 LPXNO60711 386 aa16.36■□□□□ 0.21
DNMT1-213ENST00000587604 PPFIA4O75335 1185 aa16.36■□□□□ 0.21
DNMT1-213ENST00000587604 HOXD8P13378 290 aaPredicted RBP16.36■□□□□ 0.21
DNMT1-213ENST00000587604 KIAA0753Q2KHM9 967 aa16.36■□□□□ 0.21
DNMT1-213ENST00000587604 IFIT1BQ5T764 474 aaKnown RBP16.36■□□□□ 0.21
DNMT1-213ENST00000587604 KCNV1Q6PIU1 500 aa16.36■□□□□ 0.21
DNMT1-213ENST00000587604 STOX1Q6ZVD7 989 aa16.36■□□□□ 0.21
DNMT1-213ENST00000587604 STAG2Q8N3U4 1231 aa16.36■□□□□ 0.21
DNMT1-213ENST00000587604 SAMD3Q8N6K7 520 aa16.36■□□□□ 0.21
DNMT1-213ENST00000587604 MTMR8Q96EF0 704 aa16.36■□□□□ 0.21
DNMT1-213ENST00000587604 LMCD1Q9NZU5 365 aa16.36■□□□□ 0.21
DNMT1-213ENST00000587604 LCHNA4D1U4 455 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms