RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 STAG1Q8WVM7 1258 aa9.11□□□□□ -0.95
VMP1-204ENST00000587259 ATXN2LQ8WWM7 1075 aaKnown RBP9.11□□□□□ -0.95
VMP1-204ENST00000587259 COPS5Q92905 334 aa9.11□□□□□ -0.95
VMP1-204ENST00000587259 AP5M1Q9H0R1 490 aa9.11□□□□□ -0.95
VMP1-204ENST00000587259 IL25Q9H293 177 aa9.11□□□□□ -0.95
VMP1-204ENST00000587259 ALDH8A1Q9H2A2 487 aaPredicted RBP9.11□□□□□ -0.95
VMP1-204ENST00000587259 ZSWIM6Q9HCJ5 1215 aa9.11□□□□□ -0.95
VMP1-204ENST00000587259 IL17RBQ9NRM6 502 aa9.11□□□□□ -0.95
VMP1-204ENST00000587259 CYP39A1Q9NYL5 469 aa9.11□□□□□ -0.95
VMP1-204ENST00000587259 FBXO40Q9UH90 709 aa9.11□□□□□ -0.95
VMP1-204ENST00000587259 PRR12Q9ULL5 1215 aa9.11□□□□□ -0.95
VMP1-204ENST00000587259 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.11□□□□□ -0.95
VMP1-204ENST00000587259 DDX11L8A8MPP1 907 aa9.1□□□□□ -0.95
VMP1-204ENST00000587259 NFIBO00712 420 aa9.1□□□□□ -0.95
VMP1-204ENST00000587259 SLC27A2O14975 620 aa9.1□□□□□ -0.95
VMP1-204ENST00000587259 CA3P07451 260 aa9.1□□□□□ -0.95
VMP1-204ENST00000587259 MYL3P08590 195 aa9.1□□□□□ -0.95
VMP1-204ENST00000587259 ATP2A2P16615 1042 aaKnown RBP9.1□□□□□ -0.95
VMP1-204ENST00000587259 GNAT2P19087 354 aa9.1□□□□□ -0.95
VMP1-204ENST00000587259 DDIT3P35638 169 aa9.1□□□□□ -0.95
VMP1-204ENST00000587259 OAZ1P54368 228 aa9.1□□□□□ -0.95
VMP1-204ENST00000587259 NKX3-2P78367 333 aa9.1□□□□□ -0.95
VMP1-204ENST00000587259 PTH1RQ03431 593 aa9.1□□□□□ -0.95
VMP1-204ENST00000587259 BAATQ14032 418 aaPredicted RBP9.1□□□□□ -0.95
VMP1-204ENST00000587259 CCDC96Q2M329 555 aa9.1□□□□□ -0.95
VMP1-204ENST00000587259 GIMAP6Q6P9H5 292 aa9.1□□□□□ -0.95
VMP1-204ENST00000587259 SLC30A10Q6XR72 485 aa9.1□□□□□ -0.95
VMP1-204ENST00000587259 ZNF589Q86UQ0 364 aaPredicted RBP9.1□□□□□ -0.95
VMP1-204ENST00000587259 JAKMIP1Q96N16 626 aaKnown RBP9.1□□□□□ -0.95
VMP1-204ENST00000587259 CCPG1Q9ULG6 757 aa9.1□□□□□ -0.95
VMP1-204ENST00000587259 STX8Q9UNK0 236 aa9.1□□□□□ -0.95
VMP1-204ENST00000587259 LIMCH1Q9UPQ0 1083 aa9.1□□□□□ -0.95
VMP1-204ENST00000587259 SLC4A7Q9Y6M7 1214 aa9.1□□□□□ -0.95
VMP1-204ENST00000587259 SCN5AQ14524 2016 aa9.1□□□□□ -0.95
VMP1-204ENST00000587259 BDP1A6H8Y1 2624 aa9.1□□□□□ -0.95
VMP1-204ENST00000587259 MYH6P13533 1939 aa9.09□□□□□ -0.95
VMP1-204ENST00000587259 TCHHQ07283 1943 aa9.09□□□□□ -0.95
VMP1-204ENST00000587259 ASB14A6NK59 587 aa9.09□□□□□ -0.95
VMP1-204ENST00000587259 GOLGA6L22H0YM25 854 aa9.09□□□□□ -0.95
VMP1-204ENST00000587259 CD2BP2O95400 341 aaKnown RBP9.09□□□□□ -0.95
VMP1-204ENST00000587259 BMP1P13497 986 aa9.09□□□□□ -0.95
VMP1-204ENST00000587259 HOXB1P14653 301 aaPredicted RBP9.09□□□□□ -0.95
VMP1-204ENST00000587259 CUL4AQ13619 759 aa9.09□□□□□ -0.95
VMP1-204ENST00000587259 IMMTQ16891 758 aaKnown RBP9.09□□□□□ -0.95
VMP1-204ENST00000587259 FAM47CQ5HY64 1035 aa9.09□□□□□ -0.95
VMP1-204ENST00000587259 KHSRPQ92945 711 aaKnown RBP eCLIP9.09□□□□□ -0.95
VMP1-204ENST00000587259 GMCL1Q96IK5 515 aa9.09□□□□□ -0.95
VMP1-204ENST00000587259 TMX3Q96JJ7 454 aa9.09□□□□□ -0.95
VMP1-204ENST00000587259 NAPBQ9H115 298 aa9.09□□□□□ -0.95
VMP1-204ENST00000587259 GPCPD1Q9NPB8 672 aa9.09□□□□□ -0.95
VMP1-204ENST00000587259 PDRG1Q9NUG6 133 aa9.09□□□□□ -0.95
VMP1-204ENST00000587259 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.09□□□□□ -0.95
VMP1-204ENST00000587259 PRRC2BQ5JSZ5 2229 aaKnown RBP9.09□□□□□ -0.95
VMP1-204ENST00000587259 PLIN4Q96Q06 1357 aa9.09□□□□□ -0.95
VMP1-204ENST00000587259 TNKSO95271 1327 aa9.08□□□□□ -0.96
VMP1-204ENST00000587259 PTPDC1A2A3K4 754 aa9.08□□□□□ -0.96
VMP1-204ENST00000587259 TSPY2A6NKD2 308 aa9.08□□□□□ -0.96
VMP1-204ENST00000587259 RANBP6O60518 1105 aaKnown RBP9.08□□□□□ -0.96
VMP1-204ENST00000587259 HSPD1P10809 573 aaKnown RBP9.08□□□□□ -0.96
VMP1-204ENST00000587259 CALML3P27482 149 aa9.08□□□□□ -0.96
VMP1-204ENST00000587259 ALDH5A1P51649 535 aaPredicted RBP9.08□□□□□ -0.96
VMP1-204ENST00000587259 PURAQ00577 322 aaKnown RBP9.08□□□□□ -0.96
VMP1-204ENST00000587259 PDE4BQ07343 736 aa9.08□□□□□ -0.96
VMP1-204ENST00000587259 NFKBIBQ15653 356 aa9.08□□□□□ -0.96
VMP1-204ENST00000587259 NBPF20Q3BBV1 942 aa9.08□□□□□ -0.96
VMP1-204ENST00000587259 IQSEC1Q6DN90 963 aa9.08□□□□□ -0.96
VMP1-204ENST00000587259 RCSD1Q6JBY9 416 aa9.08□□□□□ -0.96
VMP1-204ENST00000587259 FAM160B2Q86V87 743 aa9.08□□□□□ -0.96
VMP1-204ENST00000587259 OR6J1Q8NGC5 347 aa9.08□□□□□ -0.96
VMP1-204ENST00000587259 CHURC1Q8WUH1 139 aa9.08□□□□□ -0.96
VMP1-204ENST00000587259 ARNTL2Q8WYA1 636 aa9.08□□□□□ -0.96
VMP1-204ENST00000587259 TTC14Q96N46 770 aa9.08□□□□□ -0.96
VMP1-204ENST00000587259 WDR11Q9BZH6 1224 aa9.08□□□□□ -0.96
VMP1-204ENST00000587259 UPF3BQ9BZI7 483 aaKnown RBP9.08□□□□□ -0.96
VMP1-204ENST00000587259 NACAP1Q9BZK3 213 aa9.08□□□□□ -0.96
VMP1-204ENST00000587259 CPVLQ9H3G5 476 aa9.08□□□□□ -0.96
VMP1-204ENST00000587259 EPHX3Q9H6B9 360 aa9.08□□□□□ -0.96
VMP1-204ENST00000587259 MTCH2Q9Y6C9 303 aa9.08□□□□□ -0.96
VMP1-204ENST00000587259 WDR19Q8NEZ3 1342 aa9.07□□□□□ -0.96
VMP1-204ENST00000587259 LCHNA4D1U4 455 aa9.07□□□□□ -0.96
VMP1-204ENST00000587259 FAM86C2PA6NEL3 165 aa9.07□□□□□ -0.96
VMP1-204ENST00000587259 ZEB2O60315 1214 aa9.07□□□□□ -0.96
VMP1-204ENST00000587259 CABYRO75952 493 aa9.07□□□□□ -0.96
VMP1-204ENST00000587259 ARIH2O95376 493 aa9.07□□□□□ -0.96
VMP1-204ENST00000587259 ICAM1P05362 532 aa9.07□□□□□ -0.96
VMP1-204ENST00000587259 RPS6KB1P23443 525 aa9.07□□□□□ -0.96
VMP1-204ENST00000587259 NT5C2P49902 561 aa9.07□□□□□ -0.96
VMP1-204ENST00000587259 TCTN1Q2MV58 587 aa9.07□□□□□ -0.96
VMP1-204ENST00000587259 DUSP28Q4G0W2 176 aa9.07□□□□□ -0.96
VMP1-204ENST00000587259 RRP12Q5JTH9 1297 aaKnown RBP9.07□□□□□ -0.96
VMP1-204ENST00000587259 CLEC4DQ8WXI8 215 aa9.07□□□□□ -0.96
VMP1-204ENST00000587259 NEK1Q96PY6 1258 aa9.07□□□□□ -0.96
VMP1-204ENST00000587259 MTIF3Q9H2K0 278 aaKnown RBP9.07□□□□□ -0.96
VMP1-204ENST00000587259 ZNF287Q9HBT7 754 aa9.07□□□□□ -0.96
VMP1-204ENST00000587259 VTA1Q9NP79 307 aa9.07□□□□□ -0.96
VMP1-204ENST00000587259 TOMM22Q9NS69 142 aa9.07□□□□□ -0.96
VMP1-204ENST00000587259 PCDHA11Q9Y5I1 949 aa9.07□□□□□ -0.96
VMP1-204ENST00000587259 NCOR1O75376 2440 aa9.06□□□□□ -0.96
VMP1-204ENST00000587259 PDCP20941 246 aa9.06□□□□□ -0.96
VMP1-204ENST00000587259 AK2P54819 239 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms