RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 ZNF536O15090 1300 aa11.52□□□□□ -0.57
APOC1-201ENST00000586638 LCTP09848 1927 aa11.52□□□□□ -0.57
APOC1-201ENST00000586638 ICAM1P05362 532 aa11.51□□□□□ -0.57
APOC1-201ENST00000586638 OSBPP22059 807 aa11.51□□□□□ -0.57
APOC1-201ENST00000586638 GRK4P32298 578 aa11.51□□□□□ -0.57
APOC1-201ENST00000586638 LONP1P36776 959 aaKnown RBP11.51□□□□□ -0.57
APOC1-201ENST00000586638 PRPHP41219 470 aa11.51□□□□□ -0.57
APOC1-201ENST00000586638 PNOCQ13519 176 aa11.51□□□□□ -0.57
APOC1-201ENST00000586638 CALCRLQ16602 461 aa11.51□□□□□ -0.57
APOC1-201ENST00000586638 STX1AQ16623 288 aa11.51□□□□□ -0.57
APOC1-201ENST00000586638 LONRF3Q496Y0 759 aa11.51□□□□□ -0.57
APOC1-201ENST00000586638 CHRDL2Q6WN34 429 aa11.51□□□□□ -0.57
APOC1-201ENST00000586638 DTHD1Q6ZMT9 781 aa11.51□□□□□ -0.57
APOC1-201ENST00000586638 PRPF38AQ8NAV1 312 aaKnown RBP11.51□□□□□ -0.57
APOC1-201ENST00000586638 CNNM3Q8NE01 707 aa11.51□□□□□ -0.57
APOC1-201ENST00000586638 TBC1D5Q92609 795 aa11.51□□□□□ -0.57
APOC1-201ENST00000586638 TRIM47Q96LD4 638 aa11.51□□□□□ -0.57
APOC1-201ENST00000586638 DNAJC25Q9H1X3 360 aa11.51□□□□□ -0.57
APOC1-201ENST00000586638 TMOD4Q9NZQ9 345 aa11.51□□□□□ -0.57
APOC1-201ENST00000586638 MRPL11Q9Y3B7 192 aaKnown RBP11.51□□□□□ -0.57
APOC1-201ENST00000586638 AFG3L2Q9Y4W6 797 aa11.51□□□□□ -0.57
APOC1-201ENST00000586638 SPDYE3A6NKU9 549 aa11.5□□□□□ -0.57
APOC1-201ENST00000586638 C19orf81C9J6K1 198 aa11.5□□□□□ -0.57
APOC1-201ENST00000586638 BIN1O00499 593 aa11.5□□□□□ -0.57
APOC1-201ENST00000586638 LAD1O00515 517 aa11.5□□□□□ -0.57
APOC1-201ENST00000586638 DLL1O00548 723 aa11.5□□□□□ -0.57
APOC1-201ENST00000586638 CFBP00751 764 aa11.5□□□□□ -0.57
APOC1-201ENST00000586638 GJB1P08034 283 aa11.5□□□□□ -0.57
APOC1-201ENST00000586638 ALAS1P13196 640 aa11.5□□□□□ -0.57
APOC1-201ENST00000586638 CTGFP29279 349 aa11.5□□□□□ -0.57
APOC1-201ENST00000586638 CDC25AP30304 524 aa11.5□□□□□ -0.57
APOC1-201ENST00000586638 ARHGAP4P98171 946 aa11.5□□□□□ -0.57
APOC1-201ENST00000586638 TRAF1Q13077 416 aa11.5□□□□□ -0.57
APOC1-201ENST00000586638 KARSQ15046 597 aaKnown RBP11.5□□□□□ -0.57
APOC1-201ENST00000586638 FCHSD1Q86WN1 690 aa11.5□□□□□ -0.57
APOC1-201ENST00000586638 CPXCR1Q8N123 301 aa11.5□□□□□ -0.57
APOC1-201ENST00000586638 UIMC1Q96RL1 719 aa11.5□□□□□ -0.57
APOC1-201ENST00000586638 SLC38A10Q9HBR0 1119 aa11.5□□□□□ -0.57
APOC1-201ENST00000586638 HOMER2Q9NSB8 354 aa11.5□□□□□ -0.57
APOC1-201ENST00000586638 DDX25Q9UHL0 483 aaKnown RBP11.5□□□□□ -0.57
APOC1-201ENST00000586638 KCNH4Q9UQ05 1017 aa11.5□□□□□ -0.57
APOC1-201ENST00000586638 CTDP1Q9Y5B0 961 aaPredicted RBP11.5□□□□□ -0.57
APOC1-201ENST00000586638 KIAA0100Q14667 2235 aaKnown RBP11.5□□□□□ -0.57
APOC1-201ENST00000586638 GCOM1H8Y6P7 765 aaPredicted RBP11.49□□□□□ -0.57
APOC1-201ENST00000586638 PIK3CDO00329 1044 aa11.49□□□□□ -0.57
APOC1-201ENST00000586638 NFIBO00712 420 aa11.49□□□□□ -0.57
APOC1-201ENST00000586638 POLR2MP0CAP2 368 aa11.49□□□□□ -0.57
APOC1-201ENST00000586638 CCL5P13501 91 aa11.49□□□□□ -0.57
APOC1-201ENST00000586638 GCFC2P16383 781 aaKnown RBP11.49□□□□□ -0.57
APOC1-201ENST00000586638 SREBF1P36956 1147 aa11.49□□□□□ -0.57
APOC1-201ENST00000586638 TXLNAP40222 546 aa11.49□□□□□ -0.57
APOC1-201ENST00000586638 TXKP42681 527 aa11.49□□□□□ -0.57
APOC1-201ENST00000586638 GJA8P48165 433 aa11.49□□□□□ -0.57
APOC1-201ENST00000586638 UBXN2AP68543 259 aa11.49□□□□□ -0.57
APOC1-201ENST00000586638 POSTNQ15063 836 aa11.49□□□□□ -0.57
APOC1-201ENST00000586638 E2F4Q16254 413 aa11.49□□□□□ -0.57
APOC1-201ENST00000586638 MUM1L1Q5H9M0 696 aa11.49□□□□□ -0.57
APOC1-201ENST00000586638 SH3D19Q5HYK7 790 aa11.49□□□□□ -0.57
APOC1-201ENST00000586638 MCTP2Q6DN12 878 aa11.49□□□□□ -0.57
APOC1-201ENST00000586638 PPP4R3AQ6IN85 833 aa11.49□□□□□ -0.57
APOC1-201ENST00000586638 GADL1Q6ZQY3 521 aa11.49□□□□□ -0.57
APOC1-201ENST00000586638 FAM200AQ8TCP9 573 aa11.49□□□□□ -0.57
APOC1-201ENST00000586638 CRYGNQ8WXF5 182 aa11.49□□□□□ -0.57
APOC1-201ENST00000586638 CLEC4DQ8WXI8 215 aa11.49□□□□□ -0.57
APOC1-201ENST00000586638 GJA10Q969M2 543 aa11.49□□□□□ -0.57
APOC1-201ENST00000586638 MTMR9Q96QG7 549 aa11.49□□□□□ -0.57
APOC1-201ENST00000586638 HTATIP2Q9BUP3 242 aa11.49□□□□□ -0.57
APOC1-201ENST00000586638 RNF208Q9H0X6 261 aa11.49□□□□□ -0.57
APOC1-201ENST00000586638 KIAA1468Q9P260 1216 aa11.49□□□□□ -0.57
APOC1-201ENST00000586638 COL6A3P12111 3177 aa11.49□□□□□ -0.57
APOC1-201ENST00000586638 CEP290O15078 2479 aa11.49□□□□□ -0.57
APOC1-201ENST00000586638 TRIOBPQ9H2D6 2365 aa11.48□□□□□ -0.57
APOC1-201ENST00000586638 POTEMA6NI47 508 aa11.48□□□□□ -0.57
APOC1-201ENST00000586638 VWA5AO00534 786 aa11.48□□□□□ -0.57
APOC1-201ENST00000586638 CXCL11O14625 94 aa11.48□□□□□ -0.57
APOC1-201ENST00000586638 ZBED4O75132 1171 aa11.48□□□□□ -0.57
APOC1-201ENST00000586638 FOSP01100 380 aaPredicted RBP11.48□□□□□ -0.57
APOC1-201ENST00000586638 DSG3P32926 999 aa11.48□□□□□ -0.57
APOC1-201ENST00000586638 TECP42680 631 aa11.48□□□□□ -0.57
APOC1-201ENST00000586638 MOGSQ13724 837 aa11.48□□□□□ -0.57
APOC1-201ENST00000586638 TMEM266Q2M3C6 531 aa11.48□□□□□ -0.57
APOC1-201ENST00000586638 TREML2Q5T2D2 321 aa11.48□□□□□ -0.57
APOC1-201ENST00000586638 SLC30A10Q6XR72 485 aa11.48□□□□□ -0.57
APOC1-201ENST00000586638 CABP7Q86V35 215 aa11.48□□□□□ -0.57
APOC1-201ENST00000586638 REPS2Q8NFH8 660 aa11.48□□□□□ -0.57
APOC1-201ENST00000586638 RASSF8Q8NHQ8 419 aa11.48□□□□□ -0.57
APOC1-201ENST00000586638 MBOAT7Q96N66 472 aa11.48□□□□□ -0.57
APOC1-201ENST00000586638 NAP1L4Q99733 375 aaKnown RBP11.48□□□□□ -0.57
APOC1-201ENST00000586638 CBX8Q9HC52 389 aa11.48□□□□□ -0.57
APOC1-201ENST00000586638 ANO10Q9NW15 660 aa11.48□□□□□ -0.57
APOC1-201ENST00000586638 NR2E3Q9Y5X4 410 aa11.48□□□□□ -0.57
APOC1-201ENST00000586638 MYPNQ86TC9 1320 aa11.48□□□□□ -0.57
APOC1-201ENST00000586638 CENPFP49454 3210 aa11.47□□□□□ -0.57
APOC1-201ENST00000586638 SPDYE16A6NNV3 312 aaPredicted RBP11.47□□□□□ -0.57
APOC1-201ENST00000586638 CASP1P29466 404 aa11.47□□□□□ -0.57
APOC1-201ENST00000586638 AFMP43652 599 aa11.47□□□□□ -0.57
APOC1-201ENST00000586638 FXR2P51116 673 aaKnown RBP eCLIP11.47□□□□□ -0.57
APOC1-201ENST00000586638 FCGRTP55899 365 aa11.47□□□□□ -0.57
APOC1-201ENST00000586638 NLRP12P59046 1061 aa11.47□□□□□ -0.57
APOC1-201ENST00000586638 MDM2Q00987 491 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms