RNA–Protein interactions for RNA: ENST00000585409.2

LSM7-203, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM7, Length 512 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-203ENST00000585409 Q6ZUG5 572 aa26.82■■□□□ 1.88
LSM7-203ENST00000585409 RPUSD2Q8IZ73 545 aaKnown RBP26.82■■□□□ 1.88
LSM7-203ENST00000585409 LZTS2Q9BRK4 669 aa26.82■■□□□ 1.88
LSM7-203ENST00000585409 RANBP17Q9H2T7 1088 aaKnown RBP26.82■■□□□ 1.88
LSM7-203ENST00000585409 SLC4A7Q9Y6M7 1214 aa26.82■■□□□ 1.88
LSM7-203ENST00000585409 SCN10AQ9Y5Y9 1956 aa26.82■■□□□ 1.88
LSM7-203ENST00000585409 GOLGA8HP0CJ92 632 aa26.81■■□□□ 1.88
LSM7-203ENST00000585409 RCAN1P53805 252 aa26.81■■□□□ 1.88
LSM7-203ENST00000585409 TTBK2Q6IQ55 1244 aa26.81■■□□□ 1.88
LSM7-203ENST00000585409 ADAMTS19Q8TE59 1207 aa26.81■■□□□ 1.88
LSM7-203ENST00000585409 TCEANC2Q96MN5 208 aa26.81■■□□□ 1.88
LSM7-203ENST00000585409 SENP2Q9HC62 589 aa26.81■■□□□ 1.88
LSM7-203ENST00000585409 PCDHA11Q9Y5I1 949 aa26.81■■□□□ 1.88
LSM7-203ENST00000585409 TRANK1O15050 2925 aa26.8■■□□□ 1.88
LSM7-203ENST00000585409 LOC102724159A0A0B4J2E5 919 aa26.8■■□□□ 1.88
LSM7-203ENST00000585409 PALM3A6NDB9 673 aaPredicted RBP26.8■■□□□ 1.88
LSM7-203ENST00000585409 KLRF2D3W0D1 207 aa26.8■■□□□ 1.88
LSM7-203ENST00000585409 SLC16A2P36021 539 aa26.8■■□□□ 1.88
LSM7-203ENST00000585409 RABGGTBP53611 331 aa26.8■■□□□ 1.88
LSM7-203ENST00000585409 PWP2Q15269 919 aaKnown RBP26.8■■□□□ 1.88
LSM7-203ENST00000585409 IL17RAQ96F46 866 aa26.8■■□□□ 1.88
LSM7-203ENST00000585409 SCLYQ96I15 445 aa26.8■■□□□ 1.88
LSM7-203ENST00000585409 C22orf23Q9BZE7 217 aa26.8■■□□□ 1.88
LSM7-203ENST00000585409 GPHNQ9NQX3 736 aaPredicted RBP26.8■■□□□ 1.88
LSM7-203ENST00000585409 RBM47A0AV96 593 aaKnown RBP26.79■■□□□ 1.88
LSM7-203ENST00000585409 ZBTB43O43298 467 aa26.79■■□□□ 1.88
LSM7-203ENST00000585409 PFKMP08237 780 aa26.79■■□□□ 1.88
LSM7-203ENST00000585409 CPA1P15085 419 aa26.79■■□□□ 1.88
LSM7-203ENST00000585409 ALDH5A1P51649 535 aaPredicted RBP26.79■■□□□ 1.88
LSM7-203ENST00000585409 TRAF1Q13077 416 aa26.79■■□□□ 1.88
LSM7-203ENST00000585409 PPP2R5BQ15173 497 aa26.79■■□□□ 1.88
LSM7-203ENST00000585409 BRF1Q92994 677 aa26.79■■□□□ 1.88
LSM7-203ENST00000585409 PDRG1Q9NUG6 133 aa26.79■■□□□ 1.88
LSM7-203ENST00000585409 RBM28Q9NW13 759 aaKnown RBP26.79■■□□□ 1.88
LSM7-203ENST00000585409 ADD3Q9UEY8 706 aaKnown RBP26.79■■□□□ 1.88
LSM7-203ENST00000585409 MAD2L2Q9UI95 211 aa26.79■■□□□ 1.88
LSM7-203ENST00000585409 NAP1L2Q9ULW6 460 aaPredicted RBP26.79■■□□□ 1.88
LSM7-203ENST00000585409 KLF18A0A0U1RQI7 1052 aa26.78■■□□□ 1.88
LSM7-203ENST00000585409 COL9A1P20849 921 aa26.78■■□□□ 1.88
LSM7-203ENST00000585409 PURAQ00577 322 aaKnown RBP26.78■■□□□ 1.88
LSM7-203ENST00000585409 BAATQ14032 418 aaPredicted RBP26.78■■□□□ 1.88
LSM7-203ENST00000585409 ANKRD1Q15327 319 aa26.78■■□□□ 1.88
LSM7-203ENST00000585409 PPP2R2DQ66LE6 453 aa26.78■■□□□ 1.88
LSM7-203ENST00000585409 APOA5Q6Q788 366 aa26.78■■□□□ 1.88
LSM7-203ENST00000585409 WDR11Q9BZH6 1224 aa26.78■■□□□ 1.88
LSM7-203ENST00000585409 UPF3BQ9BZI7 483 aaKnown RBP26.78■■□□□ 1.88
LSM7-203ENST00000585409 TRMT13Q9NUP7 481 aaKnown RBP26.78■■□□□ 1.88
LSM7-203ENST00000585409 POLR3EQ9NVU0 708 aa26.78■■□□□ 1.88
LSM7-203ENST00000585409 TANC1Q9C0D5 1861 aa26.78■■□□□ 1.88
LSM7-203ENST00000585409 BDP1A6H8Y1 2624 aa26.77■■□□□ 1.88
LSM7-203ENST00000585409 CCDC196A0A1B0GTZ2 297 aa26.77■■□□□ 1.88
LSM7-203ENST00000585409 NFIBO00712 420 aa26.77■■□□□ 1.88
LSM7-203ENST00000585409 SUPT20HL2P0C7V6 817 aa26.77■■□□□ 1.88
LSM7-203ENST00000585409 MYOGP15173 224 aa26.77■■□□□ 1.88
LSM7-203ENST00000585409 SMARCA1P28370 1054 aa26.77■■□□□ 1.88
LSM7-203ENST00000585409 MICU3Q86XE3 530 aa26.77■■□□□ 1.88
LSM7-203ENST00000585409 IL27Q8NEV9 243 aa26.77■■□□□ 1.88
LSM7-203ENST00000585409 AGXT2Q9BYV1 514 aa26.77■■□□□ 1.88
LSM7-203ENST00000585409 UBA5Q9GZZ9 404 aa26.77■■□□□ 1.88
LSM7-203ENST00000585409 CYP2C9P11712 490 aa26.76■■□□□ 1.87
LSM7-203ENST00000585409 ATP2A2P16615 1042 aaKnown RBP26.76■■□□□ 1.87
LSM7-203ENST00000585409 COL9A3Q14050 684 aaPredicted RBP26.76■■□□□ 1.87
LSM7-203ENST00000585409 TTLL4Q14679 1199 aa26.76■■□□□ 1.87
LSM7-203ENST00000585409 FANCBQ8NB91 859 aa26.76■■□□□ 1.87
LSM7-203ENST00000585409 MYL10Q9BUA6 226 aa26.76■■□□□ 1.87
LSM7-203ENST00000585409 TCF20Q9UGU0 1960 aaKnown RBP26.76■■□□□ 1.87
LSM7-203ENST00000585409 ZBBXA8MT70 800 aa26.75■■□□□ 1.87
LSM7-203ENST00000585409 RBM25P49756 843 aaKnown RBP26.75■■□□□ 1.87
LSM7-203ENST00000585409 CPT1AP50416 773 aa26.75■■□□□ 1.87
LSM7-203ENST00000585409 ADGRF4Q8IZF3 695 aa26.75■■□□□ 1.87
LSM7-203ENST00000585409 STAG2Q8N3U4 1231 aa26.75■■□□□ 1.87
LSM7-203ENST00000585409 UHRF1Q96T88 793 aaPredicted RBP26.75■■□□□ 1.87
LSM7-203ENST00000585409 GOLGA8AA7E2F4 631 aa26.74■■□□□ 1.87
LSM7-203ENST00000585409 GOLGA8BA8MQT2 603 aa26.74■■□□□ 1.87
LSM7-203ENST00000585409 CDC37Q16543 378 aaPredicted RBP26.74■■□□□ 1.87
LSM7-203ENST00000585409 RTN1Q16799 776 aa26.74■■□□□ 1.87
LSM7-203ENST00000585409 SLC30A10Q6XR72 485 aa26.74■■□□□ 1.87
LSM7-203ENST00000585409 CLEC4DQ8WXI8 215 aa26.74■■□□□ 1.87
LSM7-203ENST00000585409 BACH2Q9BYV9 841 aa26.74■■□□□ 1.87
LSM7-203ENST00000585409 PRRC2BQ5JSZ5 2229 aaKnown RBP26.74■■□□□ 1.87
LSM7-203ENST00000585409 METAP2P50579 478 aaKnown RBP eCLIP26.73■■□□□ 1.873e-6■■□□□ 14.5
LSM7-203ENST00000585409 APOBRQ0VD83 1088 aa26.73■■□□□ 1.87
LSM7-203ENST00000585409 MTG1Q9BT17 334 aaPredicted RBP26.73■■□□□ 1.87
LSM7-203ENST00000585409 SPZ1Q9BXG8 430 aa26.73■■□□□ 1.87
LSM7-203ENST00000585409 TSPYL2Q9H2G4 693 aaPredicted RBP26.73■■□□□ 1.87
LSM7-203ENST00000585409 VAT1LQ9HCJ6 419 aa26.73■■□□□ 1.87
LSM7-203ENST00000585409 XIRP2A4UGR9 3374 aa26.73■■□□□ 1.87
LSM7-203ENST00000585409 MYL3P08590 195 aa26.72■■□□□ 1.87
LSM7-203ENST00000585409 POU3F3P20264 500 aaPredicted RBP26.72■■□□□ 1.87
LSM7-203ENST00000585409 OR6J1Q8NGC5 347 aa26.72■■□□□ 1.87
LSM7-203ENST00000585409 RIOX1Q9H6W3 641 aa26.72■■□□□ 1.87
LSM7-203ENST00000585409 JMJD4Q9H9V9 463 aa26.72■■□□□ 1.87
LSM7-203ENST00000585409 SEC63Q9UGP8 760 aaKnown RBP26.72■■□□□ 1.87
LSM7-203ENST00000585409 BRPF3Q9ULD4 1205 aa26.72■■□□□ 1.87
LSM7-203ENST00000585409 TET1Q8NFU7 2136 aa26.71■■□□□ 1.87
LSM7-203ENST00000585409 PTPDC1A2A3K4 754 aa26.71■■□□□ 1.87
LSM7-203ENST00000585409 NKRFO15226 690 aaKnown RBP eCLIP26.71■■□□□ 1.87
LSM7-203ENST00000585409 EDNRBP24530 442 aa26.71■■□□□ 1.87
LSM7-203ENST00000585409 RFC2P35250 354 aa26.71■■□□□ 1.87
LSM7-203ENST00000585409 NEK4P51957 841 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms