RNA–Protein interactions for RNA: ENST00000585395.6

LSM7-202, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-202ENST00000585395 GNASQ5JWF2 1037 aa26.57■■□□□ 1.84
LSM7-202ENST00000585395 TLK2Q86UE8 772 aa26.57■■□□□ 1.84
LSM7-202ENST00000585395 MORC4Q8TE76 937 aa26.57■■□□□ 1.84
LSM7-202ENST00000585395 LARP6Q9BRS8 491 aaKnown RBP26.57■■□□□ 1.84
LSM7-202ENST00000585395 RNF26Q9BY78 433 aaPredicted RBP26.57■■□□□ 1.84
LSM7-202ENST00000585395 PDGFCQ9NRA1 345 aa26.57■■□□□ 1.84
LSM7-202ENST00000585395 V9GY48 417 aaPredicted RBP26.57■■□□□ 1.84
LSM7-202ENST00000585395 A0A1W2PQ45 241 aaPredicted RBP26.56■■□□□ 1.84
LSM7-202ENST00000585395 A0A1W2PQY0 241 aa26.56■■□□□ 1.84
LSM7-202ENST00000585395 MOXD2PA6NHM9 499 aa26.56■■□□□ 1.84
LSM7-202ENST00000585395 ADCY6O43306 1168 aa26.56■■□□□ 1.84
LSM7-202ENST00000585395 PRPF3O43395 683 aaKnown RBP26.56■■□□□ 1.84
LSM7-202ENST00000585395 MCM2P49736 904 aa26.56■■□□□ 1.84
LSM7-202ENST00000585395 GJA9P57773 515 aa26.56■■□□□ 1.84
LSM7-202ENST00000585395 KCNA10Q16322 511 aa26.56■■□□□ 1.84
LSM7-202ENST00000585395 ARHGEF16Q5VV41 709 aa26.56■■□□□ 1.84
LSM7-202ENST00000585395 TEX2Q8IWB9 1127 aa26.56■■□□□ 1.84
LSM7-202ENST00000585395 SYTL5Q8TDW5 730 aaPredicted RBP26.56■■□□□ 1.84
LSM7-202ENST00000585395 NSUN6Q8TEA1 469 aaKnown RBP26.56■■□□□ 1.84
LSM7-202ENST00000585395 TBC1D5Q92609 795 aa26.56■■□□□ 1.84
LSM7-202ENST00000585395 STARD7Q9NQZ5 370 aa26.56■■□□□ 1.84
LSM7-202ENST00000585395 ZEB2O60315 1214 aa26.55■■□□□ 1.84
LSM7-202ENST00000585395 PPP1R11O60927 126 aaPredicted RBP26.55■■□□□ 1.84
LSM7-202ENST00000585395 ACLYP53396 1101 aa26.55■■□□□ 1.84
LSM7-202ENST00000585395 SSRP1Q08945 709 aaKnown RBP26.55■■□□□ 1.84
LSM7-202ENST00000585395 FUT2Q10981 343 aa26.55■■□□□ 1.84
LSM7-202ENST00000585395 C1orf53Q5VUE5 145 aa26.55■■□□□ 1.84
LSM7-202ENST00000585395 PPP1R18Q6NYC8 613 aa26.55■■□□□ 1.84
LSM7-202ENST00000585395 HEATR3Q7Z4Q2 680 aa26.55■■□□□ 1.84
LSM7-202ENST00000585395 CCDC12Q8WUD4 166 aaPredicted RBP26.55■■□□□ 1.84
LSM7-202ENST00000585395 CUL5Q93034 780 aa26.55■■□□□ 1.84
LSM7-202ENST00000585395 GLT1D1Q96MS3 346 aa26.55■■□□□ 1.84
LSM7-202ENST00000585395 RMDN3Q96TC7 470 aa26.55■■□□□ 1.84
LSM7-202ENST00000585395 UPF3AQ9H1J1 476 aaKnown RBP26.55■■□□□ 1.84
LSM7-202ENST00000585395 NCOA5Q9HCD5 579 aaKnown RBP26.55■■□□□ 1.84
LSM7-202ENST00000585395 PDLIM7Q9NR12 457 aa26.55■■□□□ 1.84
LSM7-202ENST00000585395 SH2B1Q9NRF2 756 aaPredicted RBP26.55■■□□□ 1.84
LSM7-202ENST00000585395 MYADML2A6NDP7 307 aa26.54■■□□□ 1.84
LSM7-202ENST00000585395 DYNC1LI2O43237 492 aaPredicted RBP26.54■■□□□ 1.84
LSM7-202ENST00000585395 SMPD1P17405 629 aa26.54■■□□□ 1.84
LSM7-202ENST00000585395 TRIM60Q495X7 471 aa26.54■■□□□ 1.84
LSM7-202ENST00000585395 TJAP1Q5JTD0 557 aa26.54■■□□□ 1.84
LSM7-202ENST00000585395 TAPT1Q6NXT6 567 aa26.54■■□□□ 1.84
LSM7-202ENST00000585395 KLHDC9Q8NEP7 349 aa26.54■■□□□ 1.84
LSM7-202ENST00000585395 TAAR1Q96RJ0 339 aa26.54■■□□□ 1.84
LSM7-202ENST00000585395 SLC26A6Q9BXS9 759 aa26.54■■□□□ 1.84
LSM7-202ENST00000585395 WDR11Q9BZH6 1224 aa26.54■■□□□ 1.84
LSM7-202ENST00000585395 GLT8D2Q9H1C3 349 aa26.54■■□□□ 1.84
LSM7-202ENST00000585395 GCOM1H8Y6P7 765 aaPredicted RBP26.53■■□□□ 1.84
LSM7-202ENST00000585395 POLR2MP0CAP2 368 aa26.53■■□□□ 1.84
LSM7-202ENST00000585395 COL9A1P20849 921 aa26.53■■□□□ 1.84
LSM7-202ENST00000585395 CST5P28325 142 aaPredicted RBP26.53■■□□□ 1.84
LSM7-202ENST00000585395 TNFRSF10AO00220 468 aa26.52■■□□□ 1.84
LSM7-202ENST00000585395 ASGR1P07306 291 aa26.52■■□□□ 1.84
LSM7-202ENST00000585395 SCG2P13521 617 aa26.52■■□□□ 1.84
LSM7-202ENST00000585395 EIF2AK2P19525 551 aaKnown RBP26.52■■□□□ 1.84
LSM7-202ENST00000585395 BEX3Q00994 111 aa26.52■■□□□ 1.84
LSM7-202ENST00000585395 GHRHRQ02643 423 aa26.52■■□□□ 1.84
LSM7-202ENST00000585395 SCRN1Q12765 414 aa26.52■■□□□ 1.84
LSM7-202ENST00000585395 NTRK3Q16288 839 aa26.52■■□□□ 1.84
LSM7-202ENST00000585395 PFKFB3Q16875 520 aaPredicted RBP26.52■■□□□ 1.84
LSM7-202ENST00000585395 SCFD2Q8WU76 684 aa26.52■■□□□ 1.84
LSM7-202ENST00000585395 GTF3C6Q969F1 213 aa26.52■■□□□ 1.84
LSM7-202ENST00000585395 hCG_1642624A0A1W2PR95 340 aa26.51■■□□□ 1.83
LSM7-202ENST00000585395 TRIM43BA6NCK2 446 aa26.51■■□□□ 1.83
LSM7-202ENST00000585395 DEXIO95424 95 aa26.51■■□□□ 1.83
LSM7-202ENST00000585395 HOXA13P31271 388 aaPredicted RBP26.51■■□□□ 1.83
LSM7-202ENST00000585395 NAPAP54920 295 aa26.51■■□□□ 1.83
LSM7-202ENST00000585395 IRX5P78411 483 aaPredicted RBP26.51■■□□□ 1.83
LSM7-202ENST00000585395 STXBP2Q15833 593 aa26.51■■□□□ 1.83
LSM7-202ENST00000585395 FSCN1Q16658 493 aaKnown RBP26.51■■□□□ 1.83
LSM7-202ENST00000585395 ME3Q16798 604 aa26.51■■□□□ 1.83
LSM7-202ENST00000585395 DUSP28Q4G0W2 176 aa26.51■■□□□ 1.83
LSM7-202ENST00000585395 PHKBQ93100 1093 aa26.51■■□□□ 1.83
LSM7-202ENST00000585395 TRIM43Q96BQ3 446 aaPredicted RBP26.51■■□□□ 1.83
LSM7-202ENST00000585395 IWS1Q96ST2 819 aa26.51■■□□□ 1.83
LSM7-202ENST00000585395 COL20A1Q9P218 1284 aa26.51■■□□□ 1.83
LSM7-202ENST00000585395 GNEQ9Y223 722 aaKnown RBP26.51■■□□□ 1.83
LSM7-202ENST00000585395 PQBP1O60828 265 aaKnown RBP26.5■■□□□ 1.83
LSM7-202ENST00000585395 EDNRBP24530 442 aa26.5■■□□□ 1.83
LSM7-202ENST00000585395 TTLL4Q14679 1199 aa26.5■■□□□ 1.83
LSM7-202ENST00000585395 SEPT14Q6ZU15 432 aa26.5■■□□□ 1.83
LSM7-202ENST00000585395 SH3RF1Q7Z6J0 888 aa26.5■■□□□ 1.83
LSM7-202ENST00000585395 CCDC148Q8NFR7 591 aa26.5■■□□□ 1.83
LSM7-202ENST00000585395 OR6J1Q8NGC5 347 aa26.5■■□□□ 1.83
LSM7-202ENST00000585395 WASF1Q92558 559 aa26.5■■□□□ 1.83
LSM7-202ENST00000585395 RNPC3Q96LT9 517 aaKnown RBP26.5■■□□□ 1.83
LSM7-202ENST00000585395 PSTPIP2Q9H939 334 aa26.5■■□□□ 1.83
LSM7-202ENST00000585395 BARHL2Q9NY43 387 aa26.5■■□□□ 1.83
LSM7-202ENST00000585395 Q9Y3F1 56 aa26.5■■□□□ 1.83
LSM7-202ENST00000585395 STK36Q9NRP7 1315 aa26.49■■□□□ 1.83
LSM7-202ENST00000585395 HSD17B4P51659 736 aa26.49■■□□□ 1.83
LSM7-202ENST00000585395 BRDTQ58F21 947 aaPredicted RBP26.49■■□□□ 1.83
LSM7-202ENST00000585395 WWC2Q6AWC2 1192 aa26.49■■□□□ 1.83
LSM7-202ENST00000585395 FCHSD1Q86WN1 690 aa26.49■■□□□ 1.83
LSM7-202ENST00000585395 FAM177A1Q8N128 213 aaPredicted RBP26.49■■□□□ 1.83
LSM7-202ENST00000585395 SMARCC2Q8TAQ2 1214 aa26.49■■□□□ 1.83
LSM7-202ENST00000585395 PXMP2Q9NR77 195 aa26.49■■□□□ 1.83
LSM7-202ENST00000585395 NKRFO15226 690 aaKnown RBP eCLIP26.48■■□□□ 1.83
LSM7-202ENST00000585395 TXNP10599 105 aaKnown RBP26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms