RNA–Protein interactions for RNA: ENST00000584054.5

EIF4A1-231, Transcript of eukaryotic translation initiation factor 4A1, human

TSL 2

Gene EIF4A1, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EIF4A1-231	ENST00000584054	ICAM3	P32942	547 aa		11.4	□□□□□ -0.58
EIF4A1-231	ENST00000584054	TRAPPC10	P48553	1259 aa		11.4	□□□□□ -0.58
EIF4A1-231	ENST00000584054	TOB1	P50616	345 aa	Predicted RBP	11.4	□□□□□ -0.58
EIF4A1-231	ENST00000584054	REST	Q13127	1097 aa		11.4	□□□□□ -0.58
EIF4A1-231	ENST00000584054	TRIM29	Q14134	588 aa		11.4	□□□□□ -0.58
EIF4A1-231	ENST00000584054	PGM5	Q15124	567 aa		11.4	□□□□□ -0.58
EIF4A1-231	ENST00000584054	PPP4R3A	Q6IN85	833 aa		11.4	□□□□□ -0.58
EIF4A1-231	ENST00000584054	NIPA1	Q7RTP0	329 aa		11.4	□□□□□ -0.58
EIF4A1-231	ENST00000584054	NOSTRIN	Q8IVI9	506 aa		11.4	□□□□□ -0.58
EIF4A1-231	ENST00000584054	RASGRP4	Q8TDF6	673 aa		11.4	□□□□□ -0.58
EIF4A1-231	ENST00000584054	LENG9	Q96B70	501 aa		11.4	□□□□□ -0.58
EIF4A1-231	ENST00000584054	INPP4A	Q96PE3	977 aa	Predicted RBP	11.4	□□□□□ -0.58
EIF4A1-231	ENST00000584054	TINF2	Q9BSI4	451 aa		11.4	□□□□□ -0.58
EIF4A1-231	ENST00000584054	SLC5A4	Q9NY91	659 aa		11.4	□□□□□ -0.58
EIF4A1-231	ENST00000584054	PTPN22	Q9Y2R2	807 aa		11.4	□□□□□ -0.58
EIF4A1-231	ENST00000584054	UBIAD1	Q9Y5Z9	338 aa		11.4	□□□□□ -0.58
EIF4A1-231	ENST00000584054	LRRC37A2	A6NM11	1700 aa		11.4	□□□□□ -0.58
EIF4A1-231	ENST00000584054	MEIS1	O00470	390 aa		11.39	□□□□□ -0.59
EIF4A1-231	ENST00000584054	EIF3J	O75822	258 aa	Known RBP	11.39	□□□□□ -0.59
EIF4A1-231	ENST00000584054	LBX1	P52954	281 aa		11.39	□□□□□ -0.59
EIF4A1-231	ENST00000584054	NKX3-2	P78367	333 aa		11.39	□□□□□ -0.59
EIF4A1-231	ENST00000584054	ARHGAP4	P98171	946 aa		11.39	□□□□□ -0.59
EIF4A1-231	ENST00000584054	GUCY1B3	Q02153	619 aa		11.39	□□□□□ -0.59
EIF4A1-231	ENST00000584054	ORC2	Q13416	577 aa	Predicted RBP	11.39	□□□□□ -0.59
EIF4A1-231	ENST00000584054	PKP1	Q13835	747 aa		11.39	□□□□□ -0.59
EIF4A1-231	ENST00000584054	NONO	Q15233	471 aa	Known RBP eCLIP	11.39	□□□□□ -0.59	1e-8	■■■■■ 39.3
EIF4A1-231	ENST00000584054	SAFB	Q15424	915 aa	Known RBP eCLIP	11.39	□□□□□ -0.59
EIF4A1-231	ENST00000584054	JAKMIP3	Q5VZ66	844 aa		11.39	□□□□□ -0.59
EIF4A1-231	ENST00000584054	TAPT1	Q6NXT6	567 aa		11.39	□□□□□ -0.59
EIF4A1-231	ENST00000584054	BRAP	Q7Z569	592 aa		11.39	□□□□□ -0.59
EIF4A1-231	ENST00000584054	DPP9	Q86TI2	863 aa		11.39	□□□□□ -0.59
EIF4A1-231	ENST00000584054	CCAR1	Q8IX12	1150 aa	Known RBP	11.39	□□□□□ -0.59
EIF4A1-231	ENST00000584054	IL31RA	Q8NI17	732 aa		11.39	□□□□□ -0.59
EIF4A1-231	ENST00000584054	TRIB2	Q92519	343 aa		11.39	□□□□□ -0.59
EIF4A1-231	ENST00000584054	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	11.39	□□□□□ -0.59
EIF4A1-231	ENST00000584054	PLXNA1	Q9UIW2	1896 aa		11.38	□□□□□ -0.59
EIF4A1-231	ENST00000584054	FAM205C	A6NFA0	338 aa		11.38	□□□□□ -0.59
EIF4A1-231	ENST00000584054	SPDYE3	A6NKU9	549 aa		11.38	□□□□□ -0.59
EIF4A1-231	ENST00000584054	MAFG	O15525	162 aa		11.38	□□□□□ -0.59
EIF4A1-231	ENST00000584054	ZNF865	P0CJ78	1059 aa	Predicted RBP	11.38	□□□□□ -0.59
EIF4A1-231	ENST00000584054	ZSCAN22	P10073	491 aa	Predicted RBP	11.38	□□□□□ -0.59
EIF4A1-231	ENST00000584054	ITGB5	P18084	799 aa		11.38	□□□□□ -0.59
EIF4A1-231	ENST00000584054	PKN2	Q16513	984 aa	Known RBP	11.38	□□□□□ -0.59
EIF4A1-231	ENST00000584054	CCL14	Q16627	93 aa		11.38	□□□□□ -0.59
EIF4A1-231	ENST00000584054		Q4G0T1	1027 aa		11.38	□□□□□ -0.59
EIF4A1-231	ENST00000584054	WDR78	Q5VTH9	848 aa		11.38	□□□□□ -0.59
EIF4A1-231	ENST00000584054	CCDC62	Q6P9F0	684 aa		11.38	□□□□□ -0.59
EIF4A1-231	ENST00000584054	ARMCX2	Q7L311	632 aa		11.38	□□□□□ -0.59
EIF4A1-231	ENST00000584054	CTU1	Q7Z7A3	348 aa	Known RBP	11.38	□□□□□ -0.59
EIF4A1-231	ENST00000584054	FCHSD1	Q86WN1	690 aa		11.38	□□□□□ -0.59
EIF4A1-231	ENST00000584054	C4orf32	Q8N8J7	132 aa		11.38	□□□□□ -0.59
EIF4A1-231	ENST00000584054	TBCK	Q8TEA7	893 aa		11.38	□□□□□ -0.59
EIF4A1-231	ENST00000584054	BRMS1	Q9HCU9	246 aa		11.38	□□□□□ -0.59
EIF4A1-231	ENST00000584054	JADE2	Q9NQC1	790 aa		11.38	□□□□□ -0.59
EIF4A1-231	ENST00000584054		B4DLN1	442 aa		11.37	□□□□□ -0.59
EIF4A1-231	ENST00000584054	SPATA31C2	B4DYI2	1134 aa		11.37	□□□□□ -0.59
EIF4A1-231	ENST00000584054	FAM86B1	E9PN63	330 aa		11.37	□□□□□ -0.59
EIF4A1-231	ENST00000584054	WNT7A	O00755	349 aa		11.37	□□□□□ -0.59
EIF4A1-231	ENST00000584054	HSP90AA1	P07900	732 aa	Known RBP	11.37	□□□□□ -0.59
EIF4A1-231	ENST00000584054	FAM86B2	P0C5J1	330 aa		11.37	□□□□□ -0.59
EIF4A1-231	ENST00000584054	TGFB3	P10600	412 aa		11.37	□□□□□ -0.59
EIF4A1-231	ENST00000584054	CYP2B6	P20813	491 aa		11.37	□□□□□ -0.59
EIF4A1-231	ENST00000584054	NUCB2	P80303	420 aa		11.37	□□□□□ -0.59
EIF4A1-231	ENST00000584054	SEMA3F	Q13275	785 aa		11.37	□□□□□ -0.59
EIF4A1-231	ENST00000584054	STXBP2	Q15833	593 aa		11.37	□□□□□ -0.59
EIF4A1-231	ENST00000584054	CEP55	Q53EZ4	464 aa		11.37	□□□□□ -0.59
EIF4A1-231	ENST00000584054	IFFO2	Q5TF58	517 aa		11.37	□□□□□ -0.59
EIF4A1-231	ENST00000584054	ARHGEF16	Q5VV41	709 aa		11.37	□□□□□ -0.59
EIF4A1-231	ENST00000584054	B3GNT9	Q6UX72	402 aa		11.37	□□□□□ -0.59
EIF4A1-231	ENST00000584054	PIK3AP1	Q6ZUJ8	805 aa		11.37	□□□□□ -0.59
EIF4A1-231	ENST00000584054	NEK8	Q86SG6	692 aa		11.37	□□□□□ -0.59
EIF4A1-231	ENST00000584054	SLAIN1	Q8ND83	568 aa		11.37	□□□□□ -0.59
EIF4A1-231	ENST00000584054	GPRASP2	Q96D09	838 aa		11.37	□□□□□ -0.59
EIF4A1-231	ENST00000584054	PGBD1	Q96JS3	809 aa		11.37	□□□□□ -0.59
EIF4A1-231	ENST00000584054	MXRA8	Q9BRK3	442 aa		11.37	□□□□□ -0.59
EIF4A1-231	ENST00000584054	ABHD16B	Q9H3Z7	469 aa		11.37	□□□□□ -0.59
EIF4A1-231	ENST00000584054	EHMT1	Q9H9B1	1298 aa		11.37	□□□□□ -0.59
EIF4A1-231	ENST00000584054	VTA1	Q9NP79	307 aa		11.37	□□□□□ -0.59
EIF4A1-231	ENST00000584054	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	11.37	□□□□□ -0.59
EIF4A1-231	ENST00000584054	TRIM17	Q9Y577	477 aa		11.37	□□□□□ -0.59
EIF4A1-231	ENST00000584054	CCDC194	A0A1B0GVG4	234 aa		11.36	□□□□□ -0.59
EIF4A1-231	ENST00000584054		H3BQV1	296 aa		11.36	□□□□□ -0.59
EIF4A1-231	ENST00000584054	ADCY3	O60266	1144 aa		11.36	□□□□□ -0.59
EIF4A1-231	ENST00000584054	F13A1	P00488	732 aa		11.36	□□□□□ -0.59
EIF4A1-231	ENST00000584054	CYBA	P13498	195 aa		11.36	□□□□□ -0.59
EIF4A1-231	ENST00000584054	GCFC2	P16383	781 aa	Known RBP	11.36	□□□□□ -0.59
EIF4A1-231	ENST00000584054	EIF2AK2	P19525	551 aa	Known RBP	11.36	□□□□□ -0.59
EIF4A1-231	ENST00000584054	CCND2	P30279	289 aa		11.36	□□□□□ -0.59
EIF4A1-231	ENST00000584054	INF2	Q27J81	1249 aa		11.36	□□□□□ -0.59
EIF4A1-231	ENST00000584054	RILPL1	Q5EBL4	403 aa		11.36	□□□□□ -0.59
EIF4A1-231	ENST00000584054	MYSM1	Q5VVJ2	828 aa		11.36	□□□□□ -0.59
EIF4A1-231	ENST00000584054	ATL3	Q6DD88	541 aa		11.36	□□□□□ -0.59
EIF4A1-231	ENST00000584054	FBXO46	Q6PJ61	603 aa	Predicted RBP	11.36	□□□□□ -0.59
EIF4A1-231	ENST00000584054	TRPV1	Q8NER1	839 aa		11.36	□□□□□ -0.59
EIF4A1-231	ENST00000584054	CYP2W1	Q8TAV3	490 aa		11.36	□□□□□ -0.59
EIF4A1-231	ENST00000584054	ARMC5	Q96C12	935 aa		11.36	□□□□□ -0.59
EIF4A1-231	ENST00000584054	MTMR9	Q96QG7	549 aa		11.36	□□□□□ -0.59
EIF4A1-231	ENST00000584054	NAP1L4	Q99733	375 aa	Known RBP	11.36	□□□□□ -0.59
EIF4A1-231	ENST00000584054	SENP7	Q9BQF6	1050 aa		11.36	□□□□□ -0.59
EIF4A1-231	ENST00000584054	KCNMB3	Q9NPA1	279 aa		11.36	□□□□□ -0.59

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