RNA–Protein interactions for RNA: ENST00000584014.5

ERBB2-216, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-216ENST00000584014 DNERQ8NFT8 737 aa9.54□□□□□ -0.88
ERBB2-216ENST00000584014 IL31RAQ8NI17 732 aa9.54□□□□□ -0.88
ERBB2-216ENST00000584014 OXER1Q8TDS5 423 aa9.54□□□□□ -0.88
ERBB2-216ENST00000584014 SHISA4Q96DD7 197 aa9.54□□□□□ -0.88
ERBB2-216ENST00000584014 ABHD8Q96I13 439 aa9.54□□□□□ -0.88
ERBB2-216ENST00000584014 DEFB118Q96PH6 123 aa9.54□□□□□ -0.88
ERBB2-216ENST00000584014 ANO3Q9BYT9 981 aa9.54□□□□□ -0.88
ERBB2-216ENST00000584014 PDGFCQ9NRA1 345 aa9.54□□□□□ -0.88
ERBB2-216ENST00000584014 MAP3K20Q9NYL2 800 aaKnown RBP9.54□□□□□ -0.88
ERBB2-216ENST00000584014 LCTP09848 1927 aa9.54□□□□□ -0.88
ERBB2-216ENST00000584014 ESYT2A0FGR8 921 aa9.53□□□□□ -0.88
ERBB2-216ENST00000584014 PIK3CDO00329 1044 aa9.53□□□□□ -0.88
ERBB2-216ENST00000584014 FOSP01100 380 aaPredicted RBP9.53□□□□□ -0.88
ERBB2-216ENST00000584014 TFRCP02786 760 aaKnown RBP9.53□□□□□ -0.88
ERBB2-216ENST00000584014 ANP32AP39687 249 aaKnown RBP9.53□□□□□ -0.88
ERBB2-216ENST00000584014 ADCYAP1R1P41586 468 aa9.53□□□□□ -0.88
ERBB2-216ENST00000584014 NR5A1Q13285 461 aa9.53□□□□□ -0.88
ERBB2-216ENST00000584014 CCDC144BQ3MJ40 725 aa9.53□□□□□ -0.88
ERBB2-216ENST00000584014 FOXD4L5Q5VV16 416 aaPredicted RBP9.53□□□□□ -0.88
ERBB2-216ENST00000584014 PIK3AP1Q6ZUJ8 805 aa9.53□□□□□ -0.88
ERBB2-216ENST00000584014 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.53□□□□□ -0.88
ERBB2-216ENST00000584014 DIS3L2Q8IYB7 885 aaKnown RBP9.53□□□□□ -0.88
ERBB2-216ENST00000584014 SAMD3Q8N6K7 520 aa9.53□□□□□ -0.88
ERBB2-216ENST00000584014 TRPV1Q8NER1 839 aa9.53□□□□□ -0.88
ERBB2-216ENST00000584014 FOXD4L4Q8WXT5 416 aaPredicted RBP9.53□□□□□ -0.88
ERBB2-216ENST00000584014 LENG1Q96BZ8 264 aaPredicted RBP9.53□□□□□ -0.88
ERBB2-216ENST00000584014 IWS1Q96ST2 819 aa9.53□□□□□ -0.88
ERBB2-216ENST00000584014 PDCD2LQ9BRP1 358 aa9.53□□□□□ -0.88
ERBB2-216ENST00000584014 PHF20Q9BVI0 1012 aa9.53□□□□□ -0.88
ERBB2-216ENST00000584014 ZMYND15Q9H091 742 aa9.53□□□□□ -0.88
ERBB2-216ENST00000584014 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.53□□□□□ -0.88
ERBB2-216ENST00000584014 ABHD16BQ9H3Z7 469 aa9.53□□□□□ -0.88
ERBB2-216ENST00000584014 FAM184BQ9ULE4 1060 aa9.53□□□□□ -0.88
ERBB2-216ENST00000584014 MRVI1Q9Y6F6 885 aa9.53□□□□□ -0.88
ERBB2-216ENST00000584014 RPTORQ8N122 1335 aa9.53□□□□□ -0.88
ERBB2-216ENST00000584014 SYNGAP1Q96PV0 1343 aa9.53□□□□□ -0.88
ERBB2-216ENST00000584014 BTBD18B2RXH4 712 aa9.52□□□□□ -0.89
ERBB2-216ENST00000584014 MARCH6O60337 910 aa9.52□□□□□ -0.89
ERBB2-216ENST00000584014 EIF3JO75822 258 aaKnown RBP9.52□□□□□ -0.89
ERBB2-216ENST00000584014 MMP1P03956 469 aa9.52□□□□□ -0.89
ERBB2-216ENST00000584014 TXNP10599 105 aaKnown RBP9.52□□□□□ -0.89
ERBB2-216ENST00000584014 CYBAP13498 195 aa9.52□□□□□ -0.89
ERBB2-216ENST00000584014 PTGS1P23219 599 aa9.52□□□□□ -0.89
ERBB2-216ENST00000584014 SOX10P56693 466 aa9.52□□□□□ -0.89
ERBB2-216ENST00000584014 CHMP4BP1P59074 171 aa9.52□□□□□ -0.89
ERBB2-216ENST00000584014 ARHGAP4P98171 946 aa9.52□□□□□ -0.89
ERBB2-216ENST00000584014 SP4Q02446 784 aa9.52□□□□□ -0.89
ERBB2-216ENST00000584014 TNFAIP2Q03169 654 aa9.52□□□□□ -0.89
ERBB2-216ENST00000584014 AP3B2Q13367 1082 aa9.52□□□□□ -0.89
ERBB2-216ENST00000584014 CUL4AQ13619 759 aa9.52□□□□□ -0.89
ERBB2-216ENST00000584014 NONOQ15233 471 aaKnown RBP eCLIP9.52□□□□□ -0.89
ERBB2-216ENST00000584014 INF2Q27J81 1249 aa9.52□□□□□ -0.89
ERBB2-216ENST00000584014 TMEM63BQ5T3F8 832 aa9.52□□□□□ -0.89
ERBB2-216ENST00000584014 GJC2Q5T442 439 aaPredicted RBP9.52□□□□□ -0.89
ERBB2-216ENST00000584014 GALNT17Q6IS24 598 aa9.52□□□□□ -0.89
ERBB2-216ENST00000584014 MAMDC4Q6UXC1 1216 aa9.52□□□□□ -0.89
ERBB2-216ENST00000584014 TBCKQ8TEA7 893 aa9.52□□□□□ -0.89
ERBB2-216ENST00000584014 ZNF333Q96JL9 665 aa9.52□□□□□ -0.89
ERBB2-216ENST00000584014 WDR11Q9BZH6 1224 aa9.52□□□□□ -0.89
ERBB2-216ENST00000584014 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.51□□□□□ -0.89
ERBB2-216ENST00000584014 FAM205CA6NFA0 338 aa9.51□□□□□ -0.89
ERBB2-216ENST00000584014 DYNC1LI2O43237 492 aaPredicted RBP9.51□□□□□ -0.89
ERBB2-216ENST00000584014 ZNF865P0CJ78 1059 aaPredicted RBP9.51□□□□□ -0.89
ERBB2-216ENST00000584014 RARBP10826 455 aa9.51□□□□□ -0.89
ERBB2-216ENST00000584014 AKR1A1P14550 325 aa9.51□□□□□ -0.89
ERBB2-216ENST00000584014 LY6KQ17RY6 165 aa9.51□□□□□ -0.89
ERBB2-216ENST00000584014 LETM2Q2VYF4 491 aa9.51□□□□□ -0.89
ERBB2-216ENST00000584014 GNPTABQ3T906 1256 aa9.51□□□□□ -0.89
ERBB2-216ENST00000584014 PCNX4Q63HM2 1172 aa9.51□□□□□ -0.89
ERBB2-216ENST00000584014 MCTP2Q6DN12 878 aa9.51□□□□□ -0.89
ERBB2-216ENST00000584014 KRT25Q7Z3Z0 450 aa9.51□□□□□ -0.89
ERBB2-216ENST00000584014 NLRX1Q86UT6 975 aa9.51□□□□□ -0.89
ERBB2-216ENST00000584014 FERMT3Q86UX7 667 aa9.51□□□□□ -0.89
ERBB2-216ENST00000584014 VSIG10LQ86VR7 867 aa9.51□□□□□ -0.89
ERBB2-216ENST00000584014 MSL3Q8N5Y2 521 aaKnown RBP9.51□□□□□ -0.89
ERBB2-216ENST00000584014 FBXO18Q8NFZ0 1043 aa9.51□□□□□ -0.89
ERBB2-216ENST00000584014 COPS5Q92905 334 aa9.51□□□□□ -0.89
ERBB2-216ENST00000584014 ARMC5Q96C12 935 aa9.51□□□□□ -0.89
ERBB2-216ENST00000584014 MAF1Q9H063 256 aa9.51□□□□□ -0.89
ERBB2-216ENST00000584014 AP5M1Q9H0R1 490 aa9.51□□□□□ -0.89
ERBB2-216ENST00000584014 VTA1Q9NP79 307 aa9.51□□□□□ -0.89
ERBB2-216ENST00000584014 DDX20Q9UHI6 824 aaKnown RBP9.51□□□□□ -0.89
ERBB2-216ENST00000584014 DDX39AO00148 427 aaKnown RBP9.5□□□□□ -0.89
ERBB2-216ENST00000584014 SEPT4O43236 478 aa9.5□□□□□ -0.89
ERBB2-216ENST00000584014 CCNT1O60563 726 aaKnown RBP9.5□□□□□ -0.89
ERBB2-216ENST00000584014 PGK1P00558 417 aa9.5□□□□□ -0.89
ERBB2-216ENST00000584014 C6orf222P0C671 652 aaPredicted RBP9.5□□□□□ -0.89
ERBB2-216ENST00000584014 SMPD1P17405 629 aa9.5□□□□□ -0.89
ERBB2-216ENST00000584014 PDCP20941 246 aa9.5□□□□□ -0.89
ERBB2-216ENST00000584014 SREBF1P36956 1147 aa9.5□□□□□ -0.89
ERBB2-216ENST00000584014 CLK2P49760 499 aaKnown RBP9.5□□□□□ -0.89
ERBB2-216ENST00000584014 MRPS9P82933 396 aaKnown RBP9.5□□□□□ -0.89
ERBB2-216ENST00000584014 GHRHRQ02643 423 aa9.5□□□□□ -0.89
ERBB2-216ENST00000584014 MTMR1Q13613 665 aa9.5□□□□□ -0.89
ERBB2-216ENST00000584014 TTLL4Q14679 1199 aa9.5□□□□□ -0.89
ERBB2-216ENST00000584014 FOXD4L6Q3SYB3 417 aaPredicted RBP9.5□□□□□ -0.89
ERBB2-216ENST00000584014 PRR16Q569H4 304 aa9.5□□□□□ -0.89
ERBB2-216ENST00000584014 IQSEC1Q6DN90 963 aa9.5□□□□□ -0.89
ERBB2-216ENST00000584014 TAPT1Q6NXT6 567 aa9.5□□□□□ -0.89
ERBB2-216ENST00000584014 FOXD4L3Q6VB84 417 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms