RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 SIRT2Q8IXJ6 389 aa9.57□□□□□ -0.88
PPP4R1-225ENST00000583438 USP38Q8NB14 1042 aa9.57□□□□□ -0.88
PPP4R1-225ENST00000583438 LPAR1Q92633 364 aa9.57□□□□□ -0.88
PPP4R1-225ENST00000583438 ATG4CQ96DT6 458 aa9.57□□□□□ -0.88
PPP4R1-225ENST00000583438 FEZ1Q99689 392 aa9.57□□□□□ -0.88
PPP4R1-225ENST00000583438 IL1RAPL2Q9NP60 686 aa9.57□□□□□ -0.88
PPP4R1-225ENST00000583438 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.57□□□□□ -0.88
PPP4R1-225ENST00000583438 FBXO28Q9NVF7 368 aa9.57□□□□□ -0.88
PPP4R1-225ENST00000583438 DYRK1BQ9Y463 629 aa9.57□□□□□ -0.88
PPP4R1-225ENST00000583438 DNMT3AQ9Y6K1 912 aaPredicted RBP9.57□□□□□ -0.88
PPP4R1-225ENST00000583438 DNM1LO00429 736 aa9.56□□□□□ -0.88
PPP4R1-225ENST00000583438 ADCY6O43306 1168 aa9.56□□□□□ -0.88
PPP4R1-225ENST00000583438 HLA-DOAP06340 250 aa9.56□□□□□ -0.88
PPP4R1-225ENST00000583438 PDE6AP16499 860 aa9.56□□□□□ -0.88
PPP4R1-225ENST00000583438 ERCC3P19447 782 aa9.56□□□□□ -0.88
PPP4R1-225ENST00000583438 USP5P45974 858 aa9.56□□□□□ -0.88
PPP4R1-225ENST00000583438 CCDC158Q5M9N0 1113 aa9.56□□□□□ -0.88
PPP4R1-225ENST00000583438 WDR78Q5VTH9 848 aa9.56□□□□□ -0.88
PPP4R1-225ENST00000583438 FAM109BQ6ICB4 259 aaPredicted RBP9.56□□□□□ -0.88
PPP4R1-225ENST00000583438 C16orf46Q6P387 395 aa9.56□□□□□ -0.88
PPP4R1-225ENST00000583438 SLC39A5Q6ZMH5 540 aa9.56□□□□□ -0.88
PPP4R1-225ENST00000583438 SPICE1Q8N0Z3 855 aa9.56□□□□□ -0.88
PPP4R1-225ENST00000583438 PANK1Q8TE04 598 aa9.56□□□□□ -0.88
PPP4R1-225ENST00000583438 BADQ92934 168 aa9.56□□□□□ -0.88
PPP4R1-225ENST00000583438 FERMT2Q96AC1 680 aa9.56□□□□□ -0.88
PPP4R1-225ENST00000583438 MYO19Q96H55 970 aa9.56□□□□□ -0.88
PPP4R1-225ENST00000583438 GAS2L1Q99501 681 aaPredicted RBP9.56□□□□□ -0.88
PPP4R1-225ENST00000583438 CDX2Q99626 313 aaPredicted RBP9.56□□□□□ -0.88
PPP4R1-225ENST00000583438 ANO2Q9NQ90 1003 aa9.56□□□□□ -0.88
PPP4R1-225ENST00000583438 GINM1Q9NU53 330 aa9.56□□□□□ -0.88
PPP4R1-225ENST00000583438 ATP11BQ9Y2G3 1177 aa9.56□□□□□ -0.88
PPP4R1-225ENST00000583438 PATL2C9JE40 543 aaKnown RBP9.55□□□□□ -0.88
PPP4R1-225ENST00000583438 ABL1P00519 1130 aa9.55□□□□□ -0.88
PPP4R1-225ENST00000583438 PTGS1P23219 599 aa9.55□□□□□ -0.88
PPP4R1-225ENST00000583438 CNGA1P29973 690 aa9.55□□□□□ -0.88
PPP4R1-225ENST00000583438 ZNF211Q13398 564 aaPredicted RBP9.55□□□□□ -0.88
PPP4R1-225ENST00000583438 MTMR3Q13615 1198 aa9.55□□□□□ -0.88
PPP4R1-225ENST00000583438 TMEM132BQ14DG7 1078 aa9.55□□□□□ -0.88
PPP4R1-225ENST00000583438 LRRC41Q15345 812 aa9.55□□□□□ -0.88
PPP4R1-225ENST00000583438 RTN1Q16799 776 aa9.55□□□□□ -0.88
PPP4R1-225ENST00000583438 ZKSCAN2Q63HK3 967 aa9.55□□□□□ -0.88
PPP4R1-225ENST00000583438 AACSQ86V21 672 aa9.55□□□□□ -0.88
PPP4R1-225ENST00000583438 REPS2Q8NFH8 660 aa9.55□□□□□ -0.88
PPP4R1-225ENST00000583438 MYLIPQ8WY64 445 aa9.55□□□□□ -0.88
PPP4R1-225ENST00000583438 NOL10Q9BSC4 688 aaKnown RBP9.55□□□□□ -0.88
PPP4R1-225ENST00000583438 SPATC1LQ9H0A9 340 aa9.55□□□□□ -0.88
PPP4R1-225ENST00000583438 GPAMQ9HCL2 828 aa9.55□□□□□ -0.88
PPP4R1-225ENST00000583438 DCP1AQ9NPI6 582 aaPredicted RBP9.55□□□□□ -0.88
PPP4R1-225ENST00000583438 HDAC5Q9UQL6 1122 aa9.55□□□□□ -0.88
PPP4R1-225ENST00000583438 MTMR7Q9Y216 660 aa9.55□□□□□ -0.88
PPP4R1-225ENST00000583438 TCF20Q9UGU0 1960 aaKnown RBP9.55□□□□□ -0.88
PPP4R1-225ENST00000583438 ZNF532Q9HCE3 1301 aa9.55□□□□□ -0.88
PPP4R1-225ENST00000583438 MYADML2A6NDP7 307 aa9.54□□□□□ -0.88
PPP4R1-225ENST00000583438 PGK2P07205 417 aa9.54□□□□□ -0.88
PPP4R1-225ENST00000583438 ADCYAP1R1P41586 468 aa9.54□□□□□ -0.88
PPP4R1-225ENST00000583438 OS9Q13438 667 aaPredicted RBP9.54□□□□□ -0.88
PPP4R1-225ENST00000583438 MFSD14CQ5VZR4 134 aa9.54□□□□□ -0.88
PPP4R1-225ENST00000583438 OLFML2BQ68BL8 750 aa9.54□□□□□ -0.88
PPP4R1-225ENST00000583438 ITPRIPQ8IWB1 547 aa9.54□□□□□ -0.88
PPP4R1-225ENST00000583438 CCDC155Q8N6L0 562 aa9.54□□□□□ -0.88
PPP4R1-225ENST00000583438 RHPN1Q8TCX5 695 aa9.54□□□□□ -0.88
PPP4R1-225ENST00000583438 MAML3Q96JK9 1138 aa9.54□□□□□ -0.88
PPP4R1-225ENST00000583438 FGD4Q96M96 766 aa9.54□□□□□ -0.88
PPP4R1-225ENST00000583438 RUBCNLQ9H714 662 aa9.54□□□□□ -0.88
PPP4R1-225ENST00000583438 ARMT1Q9H993 441 aa9.54□□□□□ -0.88
PPP4R1-225ENST00000583438 PRDM6Q9NQX0 595 aa9.54□□□□□ -0.88
PPP4R1-225ENST00000583438 KLK14Q9P0G3 267 aa9.54□□□□□ -0.88
PPP4R1-225ENST00000583438 TRANK1O15050 2925 aa9.54□□□□□ -0.88
PPP4R1-225ENST00000583438 XIRP2A4UGR9 3374 aa9.53□□□□□ -0.88
PPP4R1-225ENST00000583438 TNFRSF10BO14763 440 aa9.53□□□□□ -0.88
PPP4R1-225ENST00000583438 SEPT4O43236 478 aa9.53□□□□□ -0.88
PPP4R1-225ENST00000583438 PGK1P00558 417 aa9.53□□□□□ -0.88
PPP4R1-225ENST00000583438 F11P03951 625 aa9.53□□□□□ -0.88
PPP4R1-225ENST00000583438 ATP2B2Q01814 1243 aa9.53□□□□□ -0.88
PPP4R1-225ENST00000583438 TLE2Q04725 743 aa9.53□□□□□ -0.88
PPP4R1-225ENST00000583438 FAM26DQ5JW98 314 aa9.53□□□□□ -0.88
PPP4R1-225ENST00000583438 TANGO6Q9C0B7 1094 aa9.53□□□□□ -0.88
PPP4R1-225ENST00000583438 SEMA6BQ9H3T3 888 aa9.53□□□□□ -0.88
PPP4R1-225ENST00000583438 PRDM5Q9NQX1 630 aaPredicted RBP9.53□□□□□ -0.88
PPP4R1-225ENST00000583438 MCM9Q9NXL9 1143 aa9.53□□□□□ -0.88
PPP4R1-225ENST00000583438 ZNF214Q9UL59 606 aaPredicted RBP9.53□□□□□ -0.88
PPP4R1-225ENST00000583438 ADAMTS5Q9UNA0 930 aa9.53□□□□□ -0.88
PPP4R1-225ENST00000583438 DDX49Q9Y6V7 483 aaKnown RBP9.53□□□□□ -0.88
PPP4R1-225ENST00000583438 ZBED9Q6R2W3 1325 aa9.53□□□□□ -0.88
PPP4R1-225ENST00000583438 ROBO3Q96MS0 1386 aa9.52□□□□□ -0.88
PPP4R1-225ENST00000583438 CCER2I3L3R5 266 aa9.52□□□□□ -0.89
PPP4R1-225ENST00000583438 GOLIM4O00461 696 aa9.52□□□□□ -0.89
PPP4R1-225ENST00000583438 IPO8O15397 1037 aaKnown RBP9.52□□□□□ -0.89
PPP4R1-225ENST00000583438 ADAMTS4O75173 837 aa9.52□□□□□ -0.89
PPP4R1-225ENST00000583438 ZNF865P0CJ78 1059 aaPredicted RBP9.52□□□□□ -0.89
PPP4R1-225ENST00000583438 USP14P54578 494 aa9.52□□□□□ -0.89
PPP4R1-225ENST00000583438 COG2Q14746 738 aa9.52□□□□□ -0.89
PPP4R1-225ENST00000583438 SLC9C2Q5TAH2 1124 aa9.52□□□□□ -0.89
PPP4R1-225ENST00000583438 SHCBP1Q8NEM2 672 aa9.52□□□□□ -0.89
PPP4R1-225ENST00000583438 HELQQ8TDG4 1101 aa9.52□□□□□ -0.89
PPP4R1-225ENST00000583438 NUP88Q99567 741 aaPredicted RBP9.52□□□□□ -0.89
PPP4R1-225ENST00000583438 CUEDC1Q9NWM3 386 aaPredicted RBP9.52□□□□□ -0.89
PPP4R1-225ENST00000583438 PHF24Q9UPV7 400 aa9.52□□□□□ -0.89
PPP4R1-225ENST00000583438 TMX2Q9Y320 296 aa9.52□□□□□ -0.89
PPP4R1-225ENST00000583438 RIPK3Q9Y572 518 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms