RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 TTLL7Q6ZT98 887 aa6.79□□□□□ -1.32
SMCHD1-208ENST00000583344 ZNF227Q86WZ6 799 aa6.79□□□□□ -1.32
SMCHD1-208ENST00000583344 MIB1Q86YT6 1006 aa6.79□□□□□ -1.32
SMCHD1-208ENST00000583344 ADAMTS17Q8TE56 1095 aa6.79□□□□□ -1.32
SMCHD1-208ENST00000583344 C11orf84Q9BUA3 381 aaPredicted RBP6.79□□□□□ -1.32
SMCHD1-208ENST00000583344 ACTR10Q9NZ32 417 aa6.79□□□□□ -1.32
SMCHD1-208ENST00000583344 FBXL7Q9UJT9 491 aa6.79□□□□□ -1.32
SMCHD1-208ENST00000583344 PALD1Q9ULE6 856 aa6.79□□□□□ -1.32
SMCHD1-208ENST00000583344 K7ESM1 405 aa6.78□□□□□ -1.32
SMCHD1-208ENST00000583344 SNRPB2P08579 225 aaKnown RBP6.78□□□□□ -1.32
SMCHD1-208ENST00000583344 THBS2P35442 1172 aa6.78□□□□□ -1.32
SMCHD1-208ENST00000583344 ECI1P42126 302 aa6.78□□□□□ -1.32
SMCHD1-208ENST00000583344 STAT5AP42229 794 aa6.78□□□□□ -1.32
SMCHD1-208ENST00000583344 RPL11P62913 178 aaKnown RBP6.78□□□□□ -1.32
SMCHD1-208ENST00000583344 SF1Q15637 639 aaKnown RBP6.78□□□□□ -1.32
SMCHD1-208ENST00000583344 PRSS53Q2L4Q9 553 aa6.78□□□□□ -1.32
SMCHD1-208ENST00000583344 SV2CQ496J9 727 aa6.78□□□□□ -1.32
SMCHD1-208ENST00000583344 FAM178BQ8IXR5 827 aa6.78□□□□□ -1.32
SMCHD1-208ENST00000583344 SEC14L1Q92503 715 aa6.78□□□□□ -1.32
SMCHD1-208ENST00000583344 TIMM13Q9Y5L4 95 aaPredicted RBP6.78□□□□□ -1.32
SMCHD1-208ENST00000583344 SUSD5O60279 629 aa6.77□□□□□ -1.33
SMCHD1-208ENST00000583344 BCL6P41182 706 aa6.77□□□□□ -1.33
SMCHD1-208ENST00000583344 MRM1Q6IN84 353 aaKnown RBP6.77□□□□□ -1.33
SMCHD1-208ENST00000583344 HHIPL2Q6UWX4 724 aa6.77□□□□□ -1.33
SMCHD1-208ENST00000583344 CEP68Q76N32 757 aa6.77□□□□□ -1.33
SMCHD1-208ENST00000583344 MILR1Q7Z6M3 343 aa6.77□□□□□ -1.33
SMCHD1-208ENST00000583344 DIO2Q92813 273 aa6.77□□□□□ -1.33
SMCHD1-208ENST00000583344 CAPN10Q9HC96 672 aa6.77□□□□□ -1.33
SMCHD1-208ENST00000583344 LRP2BPQ9P2M1 347 aa6.77□□□□□ -1.33
SMCHD1-208ENST00000583344 MEFVO15553 781 aaPredicted RBP6.76□□□□□ -1.33
SMCHD1-208ENST00000583344 SSBP05455 408 aaKnown RBP eCLIP6.76□□□□□ -1.33
SMCHD1-208ENST00000583344 SLC6A11P48066 632 aa6.76□□□□□ -1.33
SMCHD1-208ENST00000583344 ITGA1P56199 1179 aa6.76□□□□□ -1.33
SMCHD1-208ENST00000583344 E4F1Q66K89 784 aaPredicted RBP6.76□□□□□ -1.33
SMCHD1-208ENST00000583344 Q8N1Y9 231 aa6.76□□□□□ -1.33
SMCHD1-208ENST00000583344 KYQ8NBH2 561 aa6.76□□□□□ -1.33
SMCHD1-208ENST00000583344 KREMEN2Q8NCW0 462 aa6.76□□□□□ -1.33
SMCHD1-208ENST00000583344 MICAL1Q8TDZ2 1067 aa6.76□□□□□ -1.33
SMCHD1-208ENST00000583344 TRMT2BQ96GJ1 504 aaKnown RBP6.76□□□□□ -1.33
SMCHD1-208ENST00000583344 DDAH1O94760 285 aa6.75□□□□□ -1.33
SMCHD1-208ENST00000583344 LCP1P13796 627 aa6.75□□□□□ -1.33
SMCHD1-208ENST00000583344 RPL13P26373 211 aaKnown RBP6.75□□□□□ -1.33
SMCHD1-208ENST00000583344 RBM10P98175 930 aaKnown RBP6.75□□□□□ -1.33
SMCHD1-208ENST00000583344 KCNAB2Q13303 367 aa6.75□□□□□ -1.33
SMCHD1-208ENST00000583344 RGL3Q3MIN7 710 aa6.75□□□□□ -1.33
SMCHD1-208ENST00000583344 MROH9Q5TGP6 573 aa6.75□□□□□ -1.33
SMCHD1-208ENST00000583344 IQCEQ6IPM2 695 aa6.75□□□□□ -1.33
SMCHD1-208ENST00000583344 ZC3H18Q86VM9 953 aaKnown RBP6.75□□□□□ -1.33
SMCHD1-208ENST00000583344 RIOX2Q8IUF8 465 aa6.75□□□□□ -1.33
SMCHD1-208ENST00000583344 FAM126BQ8IXS8 530 aa6.75□□□□□ -1.33
SMCHD1-208ENST00000583344 RCBTB1Q8NDN9 531 aa6.75□□□□□ -1.33
SMCHD1-208ENST00000583344 X6R8D5 127 aa6.75□□□□□ -1.33
SMCHD1-208ENST00000583344 MYO1BO43795 1136 aa6.74□□□□□ -1.33
SMCHD1-208ENST00000583344 SCG5P05408 212 aa6.74□□□□□ -1.33
SMCHD1-208ENST00000583344 ERCC5P28715 1186 aaPredicted RBP6.74□□□□□ -1.33
SMCHD1-208ENST00000583344 HOXC12P31275 282 aa6.74□□□□□ -1.33
SMCHD1-208ENST00000583344 ETFBP38117 255 aa6.74□□□□□ -1.33
SMCHD1-208ENST00000583344 KCNJ6P48051 423 aa6.74□□□□□ -1.33
SMCHD1-208ENST00000583344 TNNI3KQ59H18 835 aa6.74□□□□□ -1.33
SMCHD1-208ENST00000583344 DENND5AQ6IQ26 1287 aa6.74□□□□□ -1.33
SMCHD1-208ENST00000583344 PPIL6Q8IXY8 311 aa6.74□□□□□ -1.33
SMCHD1-208ENST00000583344 TMEM169Q96HH4 297 aa6.74□□□□□ -1.33
SMCHD1-208ENST00000583344 PRKAG3Q9UGI9 489 aa6.74□□□□□ -1.33
SMCHD1-208ENST00000583344 GFRA1P56159 465 aa6.73□□□□□ -1.33
SMCHD1-208ENST00000583344 ZNF827Q17R98 1081 aa6.73□□□□□ -1.33
SMCHD1-208ENST00000583344 CR1LQ2VPA4 569 aa6.73□□□□□ -1.33
SMCHD1-208ENST00000583344 MCTP2Q6DN12 878 aa6.73□□□□□ -1.33
SMCHD1-208ENST00000583344 HOMEZQ8IX15 550 aa6.73□□□□□ -1.33
SMCHD1-208ENST00000583344 TMEM145Q8NBT3 493 aa6.73□□□□□ -1.33
SMCHD1-208ENST00000583344 YIPF4Q9BSR8 244 aa6.73□□□□□ -1.33
SMCHD1-208ENST00000583344 PCDH18Q9HCL0 1135 aa6.73□□□□□ -1.33
SMCHD1-208ENST00000583344 CNOT11Q9UKZ1 510 aaKnown RBP6.73□□□□□ -1.33
SMCHD1-208ENST00000583344 PCDHA2Q9Y5H9 948 aa6.73□□□□□ -1.33
SMCHD1-208ENST00000583344 ITGB3P05106 788 aa6.72□□□□□ -1.33
SMCHD1-208ENST00000583344 INSRRP14616 1297 aa6.72□□□□□ -1.33
SMCHD1-208ENST00000583344 GTF2A2P52657 109 aa6.72□□□□□ -1.33
SMCHD1-208ENST00000583344 PRR31Q5SQ13 230 aa6.72□□□□□ -1.33
SMCHD1-208ENST00000583344 ACBD5Q5T8D3 534 aaPredicted RBP6.72□□□□□ -1.33
SMCHD1-208ENST00000583344 TTLL6Q8N841 843 aa6.72□□□□□ -1.33
SMCHD1-208ENST00000583344 BORCS6Q96GS4 357 aa6.72□□□□□ -1.33
SMCHD1-208ENST00000583344 CHAMP1Q96JM3 812 aa6.72□□□□□ -1.33
SMCHD1-208ENST00000583344 ZSWIM3Q96MP5 696 aa6.72□□□□□ -1.33
SMCHD1-208ENST00000583344 RBM15Q96T37 977 aaKnown RBP eCLIP6.72□□□□□ -1.33
SMCHD1-208ENST00000583344 COA3Q9Y2R0 106 aaPredicted RBP6.72□□□□□ -1.33
SMCHD1-208ENST00000583344 DDX3XO00571 662 aaKnown RBP eCLIP6.71□□□□□ -1.34
SMCHD1-208ENST00000583344 CPP00450 1065 aa6.71□□□□□ -1.34
SMCHD1-208ENST00000583344 LTBRP36941 435 aa6.71□□□□□ -1.34
SMCHD1-208ENST00000583344 ADAM9Q13443 819 aa6.71□□□□□ -1.34
SMCHD1-208ENST00000583344 TESK1Q15569 626 aa6.71□□□□□ -1.34
SMCHD1-208ENST00000583344 ZXDCQ2QGD7 858 aaPredicted RBP6.71□□□□□ -1.34
SMCHD1-208ENST00000583344 VPS37DQ86XT2 251 aa6.71□□□□□ -1.34
SMCHD1-208ENST00000583344 TXNDC5Q8NBS9 432 aaKnown RBP6.71□□□□□ -1.34
SMCHD1-208ENST00000583344 ARRDC4Q8NCT1 418 aa6.71□□□□□ -1.34
SMCHD1-208ENST00000583344 C1orf159Q96HA4 380 aa6.71□□□□□ -1.34
SMCHD1-208ENST00000583344 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.71□□□□□ -1.34
SMCHD1-208ENST00000583344 INVSQ9Y283 1065 aa6.71□□□□□ -1.34
SMCHD1-208ENST00000583344 ZNF652Q9Y2D9 606 aa6.71□□□□□ -1.34
SMCHD1-208ENST00000583344 GJB6O95452 261 aa6.7□□□□□ -1.34
SMCHD1-208ENST00000583344 GRIA2P42262 883 aa6.7□□□□□ -1.34
SMCHD1-208ENST00000583344 MAGEA10P43363 369 aaPredicted RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms