RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 CNKSR3Q6P9H4 555 aa9.04□□□□□ -0.96
CCDC47-205ENST00000582331 NEDD1Q8NHV4 660 aa9.04□□□□□ -0.96
CCDC47-205ENST00000582331 CAGE1Q8TC20 777 aa9.04□□□□□ -0.96
CCDC47-205ENST00000582331 AFAP1L1Q8TED9 768 aa9.04□□□□□ -0.96
CCDC47-205ENST00000582331 RNF166Q96A37 237 aaPredicted RBP9.04□□□□□ -0.96
CCDC47-205ENST00000582331 CHMP4CQ96CF2 233 aa9.04□□□□□ -0.96
CCDC47-205ENST00000582331 GMCL1Q96IK5 515 aa9.04□□□□□ -0.96
CCDC47-205ENST00000582331 CTNNA3Q9UI47 895 aa9.04□□□□□ -0.96
CCDC47-205ENST00000582331 CCPG1Q9ULG6 757 aa9.04□□□□□ -0.96
CCDC47-205ENST00000582331 LOC102724159A0A0B4J2E5 919 aa9.03□□□□□ -0.96
CCDC47-205ENST00000582331 ABHD14A-ACY1A0A1B0GW23 586 aa9.03□□□□□ -0.96
CCDC47-205ENST00000582331 LINC01553A4QN01 128 aa9.03□□□□□ -0.96
CCDC47-205ENST00000582331 A6NJR5 290 aa9.03□□□□□ -0.96
CCDC47-205ENST00000582331 NKRFO15226 690 aaKnown RBP eCLIP9.03□□□□□ -0.96
CCDC47-205ENST00000582331 RAB11FIP3O75154 756 aa9.03□□□□□ -0.96
CCDC47-205ENST00000582331 PARNO95453 639 aaKnown RBP9.03□□□□□ -0.96
CCDC47-205ENST00000582331 SELPP16109 830 aa9.03□□□□□ -0.96
CCDC47-205ENST00000582331 MCCP23508 829 aa9.03□□□□□ -0.96
CCDC47-205ENST00000582331 SLC1A4P43007 532 aa9.03□□□□□ -0.96
CCDC47-205ENST00000582331 CHMP4BP1P59074 171 aa9.03□□□□□ -0.96
CCDC47-205ENST00000582331 BAATQ14032 418 aaPredicted RBP9.03□□□□□ -0.96
CCDC47-205ENST00000582331 GPNMBQ14956 572 aa9.03□□□□□ -0.96
CCDC47-205ENST00000582331 PWP2Q15269 919 aaKnown RBP9.03□□□□□ -0.96
CCDC47-205ENST00000582331 RCSD1Q6JBY9 416 aa9.03□□□□□ -0.96
CCDC47-205ENST00000582331 KCTD1Q719H9 257 aa9.03□□□□□ -0.96
CCDC47-205ENST00000582331 LRRC8DQ7L1W4 858 aa9.03□□□□□ -0.96
CCDC47-205ENST00000582331 NEK9Q8TD19 979 aa9.03□□□□□ -0.96
CCDC47-205ENST00000582331 MFSD14AQ96MC6 490 aa9.03□□□□□ -0.96
CCDC47-205ENST00000582331 UPF3BQ9BZI7 483 aaKnown RBP9.03□□□□□ -0.96
CCDC47-205ENST00000582331 PRR12Q9ULL5 1215 aa9.03□□□□□ -0.96
CCDC47-205ENST00000582331 FAM50BQ9Y247 325 aa9.03□□□□□ -0.96
CCDC47-205ENST00000582331 H3BQ06 376 aaPredicted RBP9.02□□□□□ -0.97
CCDC47-205ENST00000582331 EFCAB14O75071 495 aa9.02□□□□□ -0.97
CCDC47-205ENST00000582331 HMMRO75330 724 aa9.02□□□□□ -0.97
CCDC47-205ENST00000582331 APPP05067 770 aa9.02□□□□□ -0.97
CCDC47-205ENST00000582331 TDO2P48775 406 aa9.02□□□□□ -0.97
CCDC47-205ENST00000582331 TFAP4Q01664 338 aa9.02□□□□□ -0.97
CCDC47-205ENST00000582331 PDE4BQ07343 736 aa9.02□□□□□ -0.97
CCDC47-205ENST00000582331 PDE4DQ08499 809 aa9.02□□□□□ -0.97
CCDC47-205ENST00000582331 IKBKEQ14164 716 aa9.02□□□□□ -0.97
CCDC47-205ENST00000582331 PPP2R5BQ15173 497 aa9.02□□□□□ -0.97
CCDC47-205ENST00000582331 FAM117BQ6P1L5 589 aa9.02□□□□□ -0.97
CCDC47-205ENST00000582331 MRPL38Q96DV4 380 aaKnown RBP9.02□□□□□ -0.97
CCDC47-205ENST00000582331 MPHOSPH6Q99547 160 aaKnown RBP9.02□□□□□ -0.97
CCDC47-205ENST00000582331 PRKAG3Q9UGI9 489 aa9.02□□□□□ -0.97
CCDC47-205ENST00000582331 TANC1Q9C0D5 1861 aa9.02□□□□□ -0.97
CCDC47-205ENST00000582331 PTPRSQ13332 1948 aa9.01□□□□□ -0.97
CCDC47-205ENST00000582331 SCN10AQ9Y5Y9 1956 aa9.01□□□□□ -0.97
CCDC47-205ENST00000582331 TET1Q8NFU7 2136 aa9.01□□□□□ -0.97
CCDC47-205ENST00000582331 PTPDC1A2A3K4 754 aa9.01□□□□□ -0.97
CCDC47-205ENST00000582331 NBNO60934 754 aa9.01□□□□□ -0.97
CCDC47-205ENST00000582331 CXCL10P02778 98 aa9.01□□□□□ -0.97
CCDC47-205ENST00000582331 ICAM1P05362 532 aa9.01□□□□□ -0.97
CCDC47-205ENST00000582331 SLC3A2P08195 630 aaKnown RBP9.01□□□□□ -0.97
CCDC47-205ENST00000582331 TXNP10599 105 aaKnown RBP9.01□□□□□ -0.97
CCDC47-205ENST00000582331 GNAT2P19087 354 aa9.01□□□□□ -0.97
CCDC47-205ENST00000582331 CALML3P27482 149 aa9.01□□□□□ -0.97
CCDC47-205ENST00000582331 ZP2Q05996 745 aa9.01□□□□□ -0.97
CCDC47-205ENST00000582331 PTPROQ16827 1216 aa9.01□□□□□ -0.97
CCDC47-205ENST00000582331 GDF6Q6KF10 455 aaPredicted RBP9.01□□□□□ -0.97
CCDC47-205ENST00000582331 EP400NLQ6ZTU2 488 aa9.01□□□□□ -0.97
CCDC47-205ENST00000582331 HFE2Q6ZVN8 426 aa9.01□□□□□ -0.97
CCDC47-205ENST00000582331 SESTD1Q86VW0 696 aa9.01□□□□□ -0.97
CCDC47-205ENST00000582331 SCFD2Q8WU76 684 aa9.01□□□□□ -0.97
CCDC47-205ENST00000582331 COPS5Q92905 334 aa9.01□□□□□ -0.97
CCDC47-205ENST00000582331 PABPC5Q96DU9 382 aaKnown RBP9.01□□□□□ -0.97
CCDC47-205ENST00000582331 C17orf80Q9BSJ5 609 aa9.01□□□□□ -0.97
CCDC47-205ENST00000582331 RTN4Q9NQC3 1192 aaKnown RBP9.01□□□□□ -0.97
CCDC47-205ENST00000582331 STX8Q9UNK0 236 aa9.01□□□□□ -0.97
CCDC47-205ENST00000582331 INSL6Q9Y581 213 aa9.01□□□□□ -0.97
CCDC47-205ENST00000582331 PLIN4Q96Q06 1357 aa9□□□□□ -0.97
CCDC47-205ENST00000582331 MYH7P12883 1935 aa9□□□□□ -0.97
CCDC47-205ENST00000582331 PATL2C9JE40 543 aaKnown RBP9□□□□□ -0.97
CCDC47-205ENST00000582331 NFIBO00712 420 aa9□□□□□ -0.97
CCDC47-205ENST00000582331 GPAA1O43292 621 aa9□□□□□ -0.97
CCDC47-205ENST00000582331 CKBP12277 381 aa9□□□□□ -0.97
CCDC47-205ENST00000582331 HNRNPUQ00839 825 aaKnown RBP eCLIP9□□□□□ -0.97
CCDC47-205ENST00000582331 TCTN1Q2MV58 587 aa9□□□□□ -0.97
CCDC47-205ENST00000582331 TIGD5Q53EQ6 642 aa9□□□□□ -0.97
CCDC47-205ENST00000582331 RNF207Q6ZRF8 634 aa9□□□□□ -0.97
CCDC47-205ENST00000582331 ADHFE1Q8IWW8 467 aa9□□□□□ -0.97
CCDC47-205ENST00000582331 IFNL3Q8IZI9 196 aa9□□□□□ -0.97
CCDC47-205ENST00000582331 BANK1Q8NDB2 785 aa9□□□□□ -0.97
CCDC47-205ENST00000582331 APPBP2Q92624 585 aa9□□□□□ -0.97
CCDC47-205ENST00000582331 OSBP2Q969R2 916 aa9□□□□□ -0.97
CCDC47-205ENST00000582331 SAMD11Q96NU1 681 aa9□□□□□ -0.97
CCDC47-205ENST00000582331 CTAGE1Q96RT6 745 aa9□□□□□ -0.97
CCDC47-205ENST00000582331 RANBP17Q9H2T7 1088 aaKnown RBP9□□□□□ -0.97
CCDC47-205ENST00000582331 EPB41L4AQ9HCS5 686 aaPredicted RBP9□□□□□ -0.97
CCDC47-205ENST00000582331 MTMR7Q9Y216 660 aa9□□□□□ -0.97
CCDC47-205ENST00000582331 TRIP12Q14669 1992 aaPredicted RBP8.99□□□□□ -0.97
CCDC47-205ENST00000582331 SIP14410 1827 aa8.99□□□□□ -0.97
CCDC47-205ENST00000582331 B4DLN1 442 aa8.99□□□□□ -0.97
CCDC47-205ENST00000582331 TK2O00142 265 aa8.99□□□□□ -0.97
CCDC47-205ENST00000582331 RNF113AO15541 343 aaKnown RBP8.99□□□□□ -0.97
CCDC47-205ENST00000582331 AMHP03971 560 aa8.99□□□□□ -0.97
CCDC47-205ENST00000582331 IRS1P35568 1242 aa8.99□□□□□ -0.97
CCDC47-205ENST00000582331 MRPL12P52815 198 aaKnown RBP8.99□□□□□ -0.97
CCDC47-205ENST00000582331 RBL2Q08999 1139 aa8.99□□□□□ -0.97
CCDC47-205ENST00000582331 GPM6BQ13491 265 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms