RNA–Protein interactions for RNA: ENST00000581335.1

NUP85-217, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-217ENST00000581335 GRIN2CQ14957 1233 aa10.3□□□□□ -0.76
NUP85-217ENST00000581335 CSPP1Q1MSJ5 1256 aa10.3□□□□□ -0.76
NUP85-217ENST00000581335 DUSP28Q4G0W2 176 aa10.3□□□□□ -0.76
NUP85-217ENST00000581335 AKNAD1Q5T1N1 836 aa10.3□□□□□ -0.76
NUP85-217ENST00000581335 PSRC1Q6PGN9 363 aaPredicted RBP10.3□□□□□ -0.76
NUP85-217ENST00000581335 MFSD6Q6ZSS7 791 aa10.3□□□□□ -0.76
NUP85-217ENST00000581335 ZNF365Q70YC5 407 aa10.3□□□□□ -0.76
NUP85-217ENST00000581335 LNPKQ9C0E8 428 aa10.3□□□□□ -0.76
NUP85-217ENST00000581335 ZNF576Q9H609 170 aa10.3□□□□□ -0.76
NUP85-217ENST00000581335 IL23AQ9NPF7 189 aa10.3□□□□□ -0.76
NUP85-217ENST00000581335 PNMA2Q9UL42 364 aa10.3□□□□□ -0.76
NUP85-217ENST00000581335 RBM47A0AV96 593 aaKnown RBP10.29□□□□□ -0.76
NUP85-217ENST00000581335 NFIBO00712 420 aa10.29□□□□□ -0.76
NUP85-217ENST00000581335 KDM4AO75164 1064 aa10.29□□□□□ -0.76
NUP85-217ENST00000581335 FGBP02675 491 aa10.29□□□□□ -0.76
NUP85-217ENST00000581335 SNHG28P0DPA3 235 aa10.29□□□□□ -0.76
NUP85-217ENST00000581335 SDSP20132 328 aa10.29□□□□□ -0.76
NUP85-217ENST00000581335 GCGRP47871 477 aa10.29□□□□□ -0.76
NUP85-217ENST00000581335 ZNF543Q08ER8 600 aa10.29□□□□□ -0.76
NUP85-217ENST00000581335 RNF207Q6ZRF8 634 aa10.29□□□□□ -0.76
NUP85-217ENST00000581335 SMC5Q8IY18 1101 aa10.29□□□□□ -0.76
NUP85-217ENST00000581335 CLEC4DQ8WXI8 215 aa10.29□□□□□ -0.76
NUP85-217ENST00000581335 HERVK_113Q902F9 699 aa10.29□□□□□ -0.76
NUP85-217ENST00000581335 TIFAQ96CG3 184 aa10.29□□□□□ -0.76
NUP85-217ENST00000581335 PBX4Q9BYU1 374 aa10.29□□□□□ -0.76
NUP85-217ENST00000581335 WDR11Q9BZH6 1224 aa10.29□□□□□ -0.76
NUP85-217ENST00000581335 HIPK3Q9H422 1215 aa10.29□□□□□ -0.76
NUP85-217ENST00000581335 RWDD1Q9H446 243 aaPredicted RBP10.29□□□□□ -0.76
NUP85-217ENST00000581335 RNF41Q9H4P4 317 aaPredicted RBP10.29□□□□□ -0.76
NUP85-217ENST00000581335 GBF1Q92538 1859 aa10.29□□□□□ -0.76
NUP85-217ENST00000581335 POM121CA8CG34 1229 aa10.28□□□□□ -0.76
NUP85-217ENST00000581335 GRXCR1A8MXD5 290 aa10.28□□□□□ -0.76
NUP85-217ENST00000581335 ZNF213O14771 459 aa10.28□□□□□ -0.76
NUP85-217ENST00000581335 HOXA2O43364 376 aa10.28□□□□□ -0.76
NUP85-217ENST00000581335 B4GALT4O60513 344 aa10.28□□□□□ -0.76
NUP85-217ENST00000581335 GPR37L1O60883 481 aa10.28□□□□□ -0.76
NUP85-217ENST00000581335 AP1G2O75843 785 aa10.28□□□□□ -0.76
NUP85-217ENST00000581335 CALML3P27482 149 aa10.28□□□□□ -0.76
NUP85-217ENST00000581335 PBX2P40425 430 aa10.28□□□□□ -0.76
NUP85-217ENST00000581335 PSMC6P62333 389 aa10.28□□□□□ -0.76
NUP85-217ENST00000581335 B4GALNT3Q6L9W6 998 aa10.28□□□□□ -0.76
NUP85-217ENST00000581335 DGKHQ86XP1 1220 aa10.28□□□□□ -0.76
NUP85-217ENST00000581335 TBC1D10CQ8IV04 446 aa10.28□□□□□ -0.76
NUP85-217ENST00000581335 DNERQ8NFT8 737 aa10.28□□□□□ -0.76
NUP85-217ENST00000581335 ESR2Q92731 530 aa10.28□□□□□ -0.76
NUP85-217ENST00000581335 MPHOSPH6Q99547 160 aaKnown RBP10.28□□□□□ -0.76
NUP85-217ENST00000581335 ZKSCAN3Q9BRR0 538 aa10.28□□□□□ -0.76
NUP85-217ENST00000581335 TRPV6Q9H1D0 765 aa10.28□□□□□ -0.76
NUP85-217ENST00000581335 OSBPL3Q9H4L5 887 aa10.28□□□□□ -0.76
NUP85-217ENST00000581335 PCDHGC3Q9UN70 934 aa10.28□□□□□ -0.76
NUP85-217ENST00000581335 UMODL1Q5DID0 1318 aa10.28□□□□□ -0.76
NUP85-217ENST00000581335 LAMA4Q16363 1823 aa10.28□□□□□ -0.76
NUP85-217ENST00000581335 CDH23Q9H251 3354 aa10.28□□□□□ -0.76
NUP85-217ENST00000581335 NKRFO15226 690 aaKnown RBP eCLIP10.27□□□□□ -0.77
NUP85-217ENST00000581335 IGHDP01880 384 aa10.27□□□□□ -0.77
NUP85-217ENST00000581335 SUPT20HL2P0C7V6 817 aa10.27□□□□□ -0.77
NUP85-217ENST00000581335 NT5C2P49902 561 aa10.27□□□□□ -0.77
NUP85-217ENST00000581335 CPT1AP50416 773 aa10.27□□□□□ -0.77
NUP85-217ENST00000581335 CCL23P55773 120 aa10.27□□□□□ -0.77
NUP85-217ENST00000581335 USP46P62068 366 aa10.27□□□□□ -0.77
NUP85-217ENST00000581335 RPS6P62753 249 aaKnown RBP10.27□□□□□ -0.77
NUP85-217ENST00000581335 PURAQ00577 322 aaKnown RBP10.27□□□□□ -0.77
NUP85-217ENST00000581335 CCDC178Q5BJE1 867 aa10.27□□□□□ -0.77
NUP85-217ENST00000581335 GPATCH4Q5T3I0 446 aaKnown RBP10.27□□□□□ -0.77
NUP85-217ENST00000581335 SLC30A10Q6XR72 485 aa10.27□□□□□ -0.77
NUP85-217ENST00000581335 CHD1LQ86WJ1 897 aa10.27□□□□□ -0.77
NUP85-217ENST00000581335 PLEKHM2Q8IWE5 1019 aa10.27□□□□□ -0.77
NUP85-217ENST00000581335 RPUSD2Q8IZ73 545 aaKnown RBP10.27□□□□□ -0.77
NUP85-217ENST00000581335 OR6J1Q8NGC5 347 aa10.27□□□□□ -0.77
NUP85-217ENST00000581335 NOC4LQ9BVI4 516 aaKnown RBP10.27□□□□□ -0.77
NUP85-217ENST00000581335 ALDH8A1Q9H2A2 487 aaPredicted RBP10.27□□□□□ -0.77
NUP85-217ENST00000581335 MTIF3Q9H2K0 278 aaKnown RBP10.27□□□□□ -0.77
NUP85-217ENST00000581335 NEDD4P46934 1319 aa10.27□□□□□ -0.77
NUP85-217ENST00000581335 WDR19Q8NEZ3 1342 aa10.27□□□□□ -0.77
NUP85-217ENST00000581335 B4DLN1 442 aa10.26□□□□□ -0.77
NUP85-217ENST00000581335 MYL3P08590 195 aa10.26□□□□□ -0.77
NUP85-217ENST00000581335 GOLGA8HP0CJ92 632 aa10.26□□□□□ -0.77
NUP85-217ENST00000581335 EDNRBP24530 442 aa10.26□□□□□ -0.77
NUP85-217ENST00000581335 MRPL12P52815 198 aaKnown RBP10.26□□□□□ -0.77
NUP85-217ENST00000581335 NUCB1Q02818 461 aa10.26□□□□□ -0.77
NUP85-217ENST00000581335 RAB30Q15771 203 aa10.26□□□□□ -0.77
NUP85-217ENST00000581335 CWC27Q6UX04 472 aaKnown RBP10.26□□□□□ -0.77
NUP85-217ENST00000581335 OTOP2Q7RTS6 562 aa10.26□□□□□ -0.77
NUP85-217ENST00000581335 IQCA1Q86XH1 822 aa10.26□□□□□ -0.77
NUP85-217ENST00000581335 RGS22Q8NE09 1264 aa10.26□□□□□ -0.77
NUP85-217ENST00000581335 ANKS1AQ92625 1134 aa10.26□□□□□ -0.77
NUP85-217ENST00000581335 MTG1Q9BT17 334 aaPredicted RBP10.26□□□□□ -0.77
NUP85-217ENST00000581335 ZBED2Q9BTP6 218 aa10.26□□□□□ -0.77
NUP85-217ENST00000581335 UBA5Q9GZZ9 404 aa10.26□□□□□ -0.77
NUP85-217ENST00000581335 MAF1Q9H063 256 aa10.26□□□□□ -0.77
NUP85-217ENST00000581335 WNT8AQ9H1J5 351 aa10.26□□□□□ -0.77
NUP85-217ENST00000581335 CXXC1Q9P0U4 656 aaPredicted RBP10.26□□□□□ -0.77
NUP85-217ENST00000581335 MSRAQ9UJ68 235 aa10.26□□□□□ -0.77
NUP85-217ENST00000581335 MYH6P13533 1939 aa10.25□□□□□ -0.77
NUP85-217ENST00000581335 HIP1O00291 1037 aa10.25□□□□□ -0.77
NUP85-217ENST00000581335 KPNA6O60684 536 aa10.25□□□□□ -0.77
NUP85-217ENST00000581335 ABL2P42684 1182 aa10.25□□□□□ -0.77
NUP85-217ENST00000581335 PPP2R5BQ15173 497 aa10.25□□□□□ -0.77
NUP85-217ENST00000581335 USH1GQ495M9 461 aa10.25□□□□□ -0.77
NUP85-217ENST00000581335 BRDTQ58F21 947 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms