RNA–Protein interactions for RNA: ENST00000581298.5

SNX11-208, Transcript of sorting nexin 11, humanhuman

TSL 5

Gene SNX11, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-208ENST00000581298 UBE2OQ9C0C9 1292 aaKnown RBP8.32□□□□□ -1.08
SNX11-208ENST00000581298 VAT1LQ9HCJ6 419 aa8.32□□□□□ -1.08
SNX11-208ENST00000581298 ANO2Q9NQ90 1003 aa8.32□□□□□ -1.08
SNX11-208ENST00000581298 GPHNQ9NQX3 736 aaPredicted RBP8.32□□□□□ -1.08
SNX11-208ENST00000581298 PXMP2Q9NR77 195 aa8.32□□□□□ -1.08
SNX11-208ENST00000581298 POLR3EQ9NVU0 708 aa8.32□□□□□ -1.08
SNX11-208ENST00000581298 PRKAG2Q9UGJ0 569 aa8.32□□□□□ -1.08
SNX11-208ENST00000581298 STAM2O75886 525 aa8.31□□□□□ -1.08
SNX11-208ENST00000581298 ARIH2O95376 493 aa8.31□□□□□ -1.08
SNX11-208ENST00000581298 TIMP1P01033 207 aa8.31□□□□□ -1.08
SNX11-208ENST00000581298 HMGB1P09429 215 aaKnown RBP8.31□□□□□ -1.08
SNX11-208ENST00000581298 TGFB3P10600 412 aa8.31□□□□□ -1.08
SNX11-208ENST00000581298 ICAM3P32942 547 aa8.31□□□□□ -1.08
SNX11-208ENST00000581298 HSPA4P34932 840 aa8.31□□□□□ -1.08
SNX11-208ENST00000581298 CPT1AP50416 773 aa8.31□□□□□ -1.08
SNX11-208ENST00000581298 PURAQ00577 322 aaKnown RBP8.31□□□□□ -1.08
SNX11-208ENST00000581298 MDM2Q00987 491 aaPredicted RBP8.31□□□□□ -1.08
SNX11-208ENST00000581298 BEX3Q00994 111 aa8.31□□□□□ -1.08
SNX11-208ENST00000581298 PTPN11Q06124 597 aaPredicted RBP8.31□□□□□ -1.08
SNX11-208ENST00000581298 FUT2Q10981 343 aa8.31□□□□□ -1.08
SNX11-208ENST00000581298 ITGA7Q13683 1181 aa8.31□□□□□ -1.08
SNX11-208ENST00000581298 KRT32Q14532 448 aa8.31□□□□□ -1.08
SNX11-208ENST00000581298 PPP2R5BQ15173 497 aa8.31□□□□□ -1.08
SNX11-208ENST00000581298 RASIP1Q5U651 963 aa8.31□□□□□ -1.08
SNX11-208ENST00000581298 MFSD5Q6N075 450 aa8.31□□□□□ -1.08
SNX11-208ENST00000581298 KCNV1Q6PIU1 500 aa8.31□□□□□ -1.08
SNX11-208ENST00000581298 CXCL17Q6UXB2 119 aa8.31□□□□□ -1.08
SNX11-208ENST00000581298 EEPD1Q7L9B9 569 aa8.31□□□□□ -1.08
SNX11-208ENST00000581298 SESTD1Q86VW0 696 aa8.31□□□□□ -1.08
SNX11-208ENST00000581298 SRBD1Q8N5C6 995 aaKnown RBP8.31□□□□□ -1.08
SNX11-208ENST00000581298 BADQ92934 168 aa8.31□□□□□ -1.08
SNX11-208ENST00000581298 CCDC136Q96JN2 1154 aa8.31□□□□□ -1.08
SNX11-208ENST00000581298 NEK1Q96PY6 1258 aa8.31□□□□□ -1.08
SNX11-208ENST00000581298 LBHD1Q9BQE6 289 aaPredicted RBP8.31□□□□□ -1.08
SNX11-208ENST00000581298 DDX41Q9UJV9 622 aaKnown RBP8.31□□□□□ -1.08
SNX11-208ENST00000581298 LTBP2Q14767 1821 aa8.31□□□□□ -1.08
SNX11-208ENST00000581298 GCOM1H8Y6P7 765 aaPredicted RBP8.3□□□□□ -1.08
SNX11-208ENST00000581298 POLR2MP0CAP2 368 aa8.3□□□□□ -1.08
SNX11-208ENST00000581298 TXNP10599 105 aaKnown RBP8.3□□□□□ -1.08
SNX11-208ENST00000581298 PTGS1P23219 599 aa8.3□□□□□ -1.08
SNX11-208ENST00000581298 EVCP57679 992 aa8.3□□□□□ -1.08
SNX11-208ENST00000581298 ARHGAP1Q07960 439 aa8.3□□□□□ -1.08
SNX11-208ENST00000581298 PGM5Q15124 567 aa8.3□□□□□ -1.08
SNX11-208ENST00000581298 BRDTQ58F21 947 aaPredicted RBP8.3□□□□□ -1.08
SNX11-208ENST00000581298 XRRA1Q6P2D8 792 aa8.3□□□□□ -1.08
SNX11-208ENST00000581298 NFRKBQ6P4R8 1299 aa8.3□□□□□ -1.08
SNX11-208ENST00000581298 TMTC3Q6ZXV5 915 aa8.3□□□□□ -1.08
SNX11-208ENST00000581298 FANCBQ8NB91 859 aa8.3□□□□□ -1.08
SNX11-208ENST00000581298 CTCFLQ8NI51 663 aaPredicted RBP8.3□□□□□ -1.08
SNX11-208ENST00000581298 VWCEQ96DN2 955 aa8.3□□□□□ -1.08
SNX11-208ENST00000581298 GUCD1Q96NT3 240 aa8.3□□□□□ -1.08
SNX11-208ENST00000581298 INPP4AQ96PE3 977 aaPredicted RBP8.3□□□□□ -1.08
SNX11-208ENST00000581298 MTG1Q9BT17 334 aaPredicted RBP8.3□□□□□ -1.08
SNX11-208ENST00000581298 FAM217BQ9NTX9 383 aaPredicted RBP8.3□□□□□ -1.08
SNX11-208ENST00000581298 TMEM39AQ9NV64 488 aa8.3□□□□□ -1.08
SNX11-208ENST00000581298 NID2Q14112 1375 aa8.3□□□□□ -1.08
SNX11-208ENST00000581298 DNAH12Q6ZR08 3092 aa8.3□□□□□ -1.08
SNX11-208ENST00000581298 CCDC69A6NI79 296 aa8.29□□□□□ -1.08
SNX11-208ENST00000581298 HAS3O00219 553 aa8.29□□□□□ -1.08
SNX11-208ENST00000581298 MEIS2O14770 477 aa8.29□□□□□ -1.08
SNX11-208ENST00000581298 TLR3O15455 904 aaKnown RBP8.29□□□□□ -1.08
SNX11-208ENST00000581298 DHX16O60231 1041 aaKnown RBP8.29□□□□□ -1.08
SNX11-208ENST00000581298 PQBP1O60828 265 aaKnown RBP8.29□□□□□ -1.08
SNX11-208ENST00000581298 PLEKHA8P1O95397 391 aa8.29□□□□□ -1.08
SNX11-208ENST00000581298 CFBP00751 764 aa8.29□□□□□ -1.08
SNX11-208ENST00000581298 GH1P01241 217 aa8.29□□□□□ -1.08
SNX11-208ENST00000581298 EPHB4P54760 987 aa8.29□□□□□ -1.08
SNX11-208ENST00000581298 SMAD3P84022 425 aaKnown RBP8.29□□□□□ -1.08
SNX11-208ENST00000581298 RBL2Q08999 1139 aa8.29□□□□□ -1.08
SNX11-208ENST00000581298 LAMC2Q13753 1193 aa8.29□□□□□ -1.08
SNX11-208ENST00000581298 SHHQ15465 462 aa8.29□□□□□ -1.08
SNX11-208ENST00000581298 ADCK5Q3MIX3 580 aa8.29□□□□□ -1.08
SNX11-208ENST00000581298 C9orf50Q5SZB4 431 aa8.29□□□□□ -1.08
SNX11-208ENST00000581298 ARHGEF16Q5VV41 709 aa8.29□□□□□ -1.08
SNX11-208ENST00000581298 APOA5Q6Q788 366 aa8.29□□□□□ -1.08
SNX11-208ENST00000581298 NOL8Q76FK4 1167 aaKnown RBP8.29□□□□□ -1.08
SNX11-208ENST00000581298 C16orf59Q7L2K0 433 aa8.29□□□□□ -1.08
SNX11-208ENST00000581298 OR6J1Q8NGC5 347 aa8.29□□□□□ -1.08
SNX11-208ENST00000581298 PPTC7Q8NI37 304 aa8.29□□□□□ -1.08
SNX11-208ENST00000581298 KAT2BQ92831 832 aa8.29□□□□□ -1.08
SNX11-208ENST00000581298 COPS5Q92905 334 aa8.29□□□□□ -1.08
SNX11-208ENST00000581298 RRP36Q96EU6 259 aaKnown RBP8.29□□□□□ -1.08
SNX11-208ENST00000581298 IL17RAQ96F46 866 aa8.29□□□□□ -1.08
SNX11-208ENST00000581298 SENP7Q9BQF6 1050 aa8.29□□□□□ -1.08
SNX11-208ENST00000581298 ALDH8A1Q9H2A2 487 aaPredicted RBP8.29□□□□□ -1.08
SNX11-208ENST00000581298 RBM28Q9NW13 759 aaKnown RBP8.29□□□□□ -1.08
SNX11-208ENST00000581298 SLC12A7Q9Y666 1083 aa8.29□□□□□ -1.08
SNX11-208ENST00000581298 hCG_1984214I3L0E3 225 aa8.28□□□□□ -1.08
SNX11-208ENST00000581298 PPFIA4O75335 1185 aa8.28□□□□□ -1.08
SNX11-208ENST00000581298 MMP3P08254 477 aa8.28□□□□□ -1.08
SNX11-208ENST00000581298 SUPT20HL2P0C7V6 817 aa8.28□□□□□ -1.08
SNX11-208ENST00000581298 RAG1P15918 1043 aa8.28□□□□□ -1.08
SNX11-208ENST00000581298 EIF2AK2P19525 551 aaKnown RBP8.28□□□□□ -1.08
SNX11-208ENST00000581298 HOXC8P31273 242 aa8.28□□□□□ -1.08
SNX11-208ENST00000581298 MRPS9P82933 396 aaKnown RBP8.28□□□□□ -1.08
SNX11-208ENST00000581298 FPGSQ05932 587 aa8.28□□□□□ -1.08
SNX11-208ENST00000581298 SEMA3FQ13275 785 aa8.28□□□□□ -1.08
SNX11-208ENST00000581298 PPIGQ13427 754 aaKnown RBP eCLIP8.28□□□□□ -1.086e-7■■■■■ 27
SNX11-208ENST00000581298 LY6KQ17RY6 165 aa8.28□□□□□ -1.08
SNX11-208ENST00000581298 TMEM240Q5SV17 173 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms