RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 SHCBP1Q8NEM2 672 aa15.67■□□□□ 0.1
CDK5RAP3-219ENST00000580670 IL31RAQ8NI17 732 aa15.67■□□□□ 0.1
CDK5RAP3-219ENST00000580670 DACT1Q9NYF0 836 aa15.67■□□□□ 0.1
CDK5RAP3-219ENST00000580670 MORF4L1Q9UBU8 362 aa15.67■□□□□ 0.1
CDK5RAP3-219ENST00000580670 LONP1P36776 959 aaKnown RBP15.66■□□□□ 0.1
CDK5RAP3-219ENST00000580670 TXKP42681 527 aa15.66■□□□□ 0.1
CDK5RAP3-219ENST00000580670 PGM5Q15124 567 aa15.66■□□□□ 0.1
CDK5RAP3-219ENST00000580670 PCNX4Q63HM2 1172 aa15.66■□□□□ 0.1
CDK5RAP3-219ENST00000580670 CYP2W1Q8TAV3 490 aa15.66■□□□□ 0.1
CDK5RAP3-219ENST00000580670 NSUN6Q8TEA1 469 aaKnown RBP15.66■□□□□ 0.1
CDK5RAP3-219ENST00000580670 SYAP1Q96A49 352 aaPredicted RBP15.66■□□□□ 0.1
CDK5RAP3-219ENST00000580670 ZIC5Q96T25 663 aa15.66■□□□□ 0.1
CDK5RAP3-219ENST00000580670 PDCD2LQ9BRP1 358 aa15.66■□□□□ 0.1
CDK5RAP3-219ENST00000580670 GZF1Q9H116 711 aaPredicted RBP15.66■□□□□ 0.1
CDK5RAP3-219ENST00000580670 PORCNQ9H237 461 aa15.66■□□□□ 0.1
CDK5RAP3-219ENST00000580670 FAM13BQ9NYF5 915 aa15.66■□□□□ 0.1
CDK5RAP3-219ENST00000580670 TMEM63CQ9P1W3 806 aa15.66■□□□□ 0.1
CDK5RAP3-219ENST00000580670 MRE11P49959 708 aa15.65■□□□□ 0.1
CDK5RAP3-219ENST00000580670 KCTD2Q14681 263 aa15.65■□□□□ 0.1
CDK5RAP3-219ENST00000580670 DEFB115Q30KQ5 88 aa15.65■□□□□ 0.1
CDK5RAP3-219ENST00000580670 CEP55Q53EZ4 464 aa15.65■□□□□ 0.1
CDK5RAP3-219ENST00000580670 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.65■□□□□ 0.1
CDK5RAP3-219ENST00000580670 ENGASEQ8NFI3 743 aa15.65■□□□□ 0.1
CDK5RAP3-219ENST00000580670 HAS1Q92839 578 aa15.65■□□□□ 0.1
CDK5RAP3-219ENST00000580670 LENG9Q96B70 501 aa15.65■□□□□ 0.1
CDK5RAP3-219ENST00000580670 ZFP91Q96JP5 570 aaPredicted RBP15.65■□□□□ 0.1
CDK5RAP3-219ENST00000580670 UIMC1Q96RL1 719 aa15.65■□□□□ 0.1
CDK5RAP3-219ENST00000580670 MMP19Q99542 508 aa15.65■□□□□ 0.1
CDK5RAP3-219ENST00000580670 EFCC1Q9HA90 598 aa15.65■□□□□ 0.1
CDK5RAP3-219ENST00000580670 KCNMB3Q9NPA1 279 aa15.65■□□□□ 0.1
CDK5RAP3-219ENST00000580670 IGLV3-22A0A075B6J6 115 aa15.64■□□□□ 0.1
CDK5RAP3-219ENST00000580670 RASSF10A6NK89 507 aa15.64■□□□□ 0.1
CDK5RAP3-219ENST00000580670 POTEB2H3BUK9 544 aa15.64■□□□□ 0.1
CDK5RAP3-219ENST00000580670 MYCLP12524 364 aaPredicted RBP15.64■□□□□ 0.1
CDK5RAP3-219ENST00000580670 TECP42680 631 aa15.64■□□□□ 0.1
CDK5RAP3-219ENST00000580670 TM4SF4P48230 202 aa15.64■□□□□ 0.1
CDK5RAP3-219ENST00000580670 CNTN2Q02246 1040 aa15.64■□□□□ 0.1
CDK5RAP3-219ENST00000580670 SNW1Q13573 536 aaKnown RBP15.64■□□□□ 0.1
CDK5RAP3-219ENST00000580670 FAM110CQ1W6H9 321 aa15.64■□□□□ 0.1
CDK5RAP3-219ENST00000580670 TMEM266Q2M3C6 531 aa15.64■□□□□ 0.1
CDK5RAP3-219ENST00000580670 USP49Q70CQ1 688 aa15.64■□□□□ 0.1
CDK5RAP3-219ENST00000580670 PLA2G4DQ86XP0 818 aa15.64■□□□□ 0.1
CDK5RAP3-219ENST00000580670 SYMPKQ92797 1274 aaKnown RBP15.64■□□□□ 0.1
CDK5RAP3-219ENST00000580670 GJA10Q969M2 543 aa15.64■□□□□ 0.1
CDK5RAP3-219ENST00000580670 EPSTI1Q96J88 318 aa15.64■□□□□ 0.1
CDK5RAP3-219ENST00000580670 MXRA8Q9BRK3 442 aa15.64■□□□□ 0.1
CDK5RAP3-219ENST00000580670 CPA4Q9UI42 421 aa15.64■□□□□ 0.1
CDK5RAP3-219ENST00000580670 KCNH3Q9ULD8 1083 aa15.64■□□□□ 0.1
CDK5RAP3-219ENST00000580670 HPSEQ9Y251 543 aa15.64■□□□□ 0.1
CDK5RAP3-219ENST00000580670 FAM237AA0A1B0GTK4 181 aa15.64■□□□□ 0.09
CDK5RAP3-219ENST00000580670 TBX3O15119 743 aa15.64■□□□□ 0.09
CDK5RAP3-219ENST00000580670 FCER1AP12319 257 aa15.64■□□□□ 0.09
CDK5RAP3-219ENST00000580670 CCND2P30279 289 aa15.64■□□□□ 0.09
CDK5RAP3-219ENST00000580670 SYKP43405 635 aa15.64■□□□□ 0.09
CDK5RAP3-219ENST00000580670 MRPS9P82933 396 aaKnown RBP15.64■□□□□ 0.09
CDK5RAP3-219ENST00000580670 NOGQ13253 232 aa15.64■□□□□ 0.09
CDK5RAP3-219ENST00000580670 CCDC183Q5T5S1 534 aa15.64■□□□□ 0.09
CDK5RAP3-219ENST00000580670 XRRA1Q6P2D8 792 aa15.64■□□□□ 0.09
CDK5RAP3-219ENST00000580670 SLFN12Q8IYM2 578 aa15.64■□□□□ 0.09
CDK5RAP3-219ENST00000580670 FMR1NBQ8N0W7 255 aaPredicted RBP15.64■□□□□ 0.09
CDK5RAP3-219ENST00000580670 DNERQ8NFT8 737 aa15.64■□□□□ 0.09
CDK5RAP3-219ENST00000580670 ETNPPLQ8TBG4 499 aa15.64■□□□□ 0.09
CDK5RAP3-219ENST00000580670 CAPNS2Q96L46 248 aa15.64■□□□□ 0.09
CDK5RAP3-219ENST00000580670 TTC12Q9H892 705 aaPredicted RBP15.64■□□□□ 0.09
CDK5RAP3-219ENST00000580670 DDX19AQ9NUU7 478 aaKnown RBP15.64■□□□□ 0.09
CDK5RAP3-219ENST00000580670 ADGRA2Q96PE1 1338 aa15.64■□□□□ 0.09
CDK5RAP3-219ENST00000580670 LCTP09848 1927 aa15.63■□□□□ 0.09
CDK5RAP3-219ENST00000580670 MEIS1O00470 390 aa15.63■□□□□ 0.09
CDK5RAP3-219ENST00000580670 MSH4O15457 936 aa15.63■□□□□ 0.09
CDK5RAP3-219ENST00000580670 KINO60870 393 aaKnown RBP15.63■□□□□ 0.09
CDK5RAP3-219ENST00000580670 NR3C2P08235 984 aa15.63■□□□□ 0.09
CDK5RAP3-219ENST00000580670 CLCN1P35523 988 aa15.63■□□□□ 0.09
CDK5RAP3-219ENST00000580670 FXR2P51116 673 aaKnown RBP eCLIP15.63■□□□□ 0.09
CDK5RAP3-219ENST00000580670 SETQ01105 290 aaPredicted RBP15.63■□□□□ 0.09
CDK5RAP3-219ENST00000580670 AK8Q96MA6 479 aa15.63■□□□□ 0.09
CDK5RAP3-219ENST00000580670 ZFYVE28Q9HCC9 887 aa15.63■□□□□ 0.09
CDK5RAP3-219ENST00000580670 PCDHA12Q9UN75 941 aa15.63■□□□□ 0.09
CDK5RAP3-219ENST00000580670 UBIAD1Q9Y5Z9 338 aa15.63■□□□□ 0.09
CDK5RAP3-219ENST00000580670 ZNF202O95125 648 aa15.62■□□□□ 0.09
CDK5RAP3-219ENST00000580670 PGK2P07205 417 aa15.62■□□□□ 0.09
CDK5RAP3-219ENST00000580670 ITGB5P18084 799 aa15.62■□□□□ 0.09
CDK5RAP3-219ENST00000580670 NIPA1Q7RTP0 329 aa15.62■□□□□ 0.09
CDK5RAP3-219ENST00000580670 VSIG10LQ86VR7 867 aa15.62■□□□□ 0.09
CDK5RAP3-219ENST00000580670 FAM133AQ8N9E0 248 aa15.62■□□□□ 0.09
CDK5RAP3-219ENST00000580670 FAM20AQ96MK3 541 aa15.62■□□□□ 0.09
CDK5RAP3-219ENST00000580670 RAB34Q9BZG1 259 aa15.62■□□□□ 0.09
CDK5RAP3-219ENST00000580670 ADD3Q9UEY8 706 aaKnown RBP15.62■□□□□ 0.09
CDK5RAP3-219ENST00000580670 SOWAHBA6NEL2 793 aa15.62■□□□□ 0.09
CDK5RAP3-219ENST00000580670 PP2D1A8MPX8 630 aa15.62■□□□□ 0.09
CDK5RAP3-219ENST00000580670 TLR2O60603 784 aa15.62■□□□□ 0.09
CDK5RAP3-219ENST00000580670 AOC2O75106 756 aa15.62■□□□□ 0.09
CDK5RAP3-219ENST00000580670 ARP10275 920 aa15.62■□□□□ 0.09
CDK5RAP3-219ENST00000580670 BCRP11274 1271 aa15.62■□□□□ 0.09
CDK5RAP3-219ENST00000580670 CDC25AP30304 524 aa15.62■□□□□ 0.09
CDK5RAP3-219ENST00000580670 TXLNAP40222 546 aa15.62■□□□□ 0.09
CDK5RAP3-219ENST00000580670 ALDH5A1P51649 535 aaPredicted RBP15.62■□□□□ 0.09
CDK5RAP3-219ENST00000580670 PDIA5Q14554 519 aa15.62■□□□□ 0.09
CDK5RAP3-219ENST00000580670 IGSF22Q8N9C0 903 aa15.62■□□□□ 0.09
CDK5RAP3-219ENST00000580670 IWS1Q96ST2 819 aa15.62■□□□□ 0.09
CDK5RAP3-219ENST00000580670 PANK2Q9BZ23 570 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms