RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 DHX37Q8IY37 1157 aaKnown RBP23.21■■□□□ 1.31
SMG8-204ENST00000580498 KATNAL1Q9BW62 490 aa23.21■■□□□ 1.31
SMG8-204ENST00000580498 PPP1R12CQ9BZL4 782 aa23.21■■□□□ 1.31
SMG8-204ENST00000580498 EHMT1Q9H9B1 1298 aa23.21■■□□□ 1.31
SMG8-204ENST00000580498 NAP1L2Q9ULW6 460 aaPredicted RBP23.21■■□□□ 1.31
SMG8-204ENST00000580498 NOD1Q9Y239 953 aa23.21■■□□□ 1.31
SMG8-204ENST00000580498 OPLAHO14841 1288 aa23.2■■□□□ 1.3
SMG8-204ENST00000580498 CD4P01730 458 aa23.2■■□□□ 1.3
SMG8-204ENST00000580498 RXRAP19793 462 aa23.2■■□□□ 1.3
SMG8-204ENST00000580498 PSMA5P28066 241 aa23.2■■□□□ 1.3
SMG8-204ENST00000580498 TMEM63BQ5T3F8 832 aa23.2■■□□□ 1.3
SMG8-204ENST00000580498 NFRKBQ6P4R8 1299 aa23.2■■□□□ 1.3
SMG8-204ENST00000580498 PSRC1Q6PGN9 363 aaPredicted RBP23.2■■□□□ 1.3
SMG8-204ENST00000580498 COPS5Q92905 334 aa23.2■■□□□ 1.3
SMG8-204ENST00000580498 CCDC196A0A1B0GTZ2 297 aa23.19■■□□□ 1.3
SMG8-204ENST00000580498 ARIH2O95376 493 aa23.19■■□□□ 1.3
SMG8-204ENST00000580498 PLEKHA8P1O95397 391 aa23.19■■□□□ 1.3
SMG8-204ENST00000580498 PTGS1P23219 599 aa23.19■■□□□ 1.3
SMG8-204ENST00000580498 CHMP4BP1P59074 171 aa23.19■■□□□ 1.3
SMG8-204ENST00000580498 RTN1Q16799 776 aa23.19■■□□□ 1.3
SMG8-204ENST00000580498 BLOC1S2Q6QNY1 142 aa23.19■■□□□ 1.3
SMG8-204ENST00000580498 TMTC3Q6ZXV5 915 aa23.19■■□□□ 1.3
SMG8-204ENST00000580498 VSIG10LQ86VR7 867 aa23.19■■□□□ 1.3
SMG8-204ENST00000580498 SRBD1Q8N5C6 995 aaKnown RBP23.19■■□□□ 1.3
SMG8-204ENST00000580498 AFG1LQ8WV93 481 aa23.19■■□□□ 1.3
SMG8-204ENST00000580498 ALDH8A1Q9H2A2 487 aaPredicted RBP23.19■■□□□ 1.3
SMG8-204ENST00000580498 PPP4R2Q9NY27 417 aa23.19■■□□□ 1.3
SMG8-204ENST00000580498 DDX41Q9UJV9 622 aaKnown RBP23.19■■□□□ 1.3
SMG8-204ENST00000580498 RANBP2P49792 3224 aaKnown RBP23.19■■□□□ 1.3
SMG8-204ENST00000580498 MMP3P08254 477 aa23.18■■□□□ 1.3
SMG8-204ENST00000580498 RCAN1P53805 252 aa23.18■■□□□ 1.3
SMG8-204ENST00000580498 XRRA1Q6P2D8 792 aa23.18■■□□□ 1.3
SMG8-204ENST00000580498 APOA5Q6Q788 366 aa23.18■■□□□ 1.3
SMG8-204ENST00000580498 CCDC82Q8N4S0 544 aa23.18■■□□□ 1.3
SMG8-204ENST00000580498 DEFB123Q8N688 67 aa23.18■■□□□ 1.3
SMG8-204ENST00000580498 CCDC155Q8N6L0 562 aa23.18■■□□□ 1.3
SMG8-204ENST00000580498 EMID1Q96A84 441 aaPredicted RBP23.18■■□□□ 1.3
SMG8-204ENST00000580498 PSTPIP2Q9H939 334 aa23.18■■□□□ 1.3
SMG8-204ENST00000580498 GOLGA8AA7E2F4 631 aa23.17■■□□□ 1.3
SMG8-204ENST00000580498 GOLGA8BA8MQT2 603 aa23.17■■□□□ 1.3
SMG8-204ENST00000580498 EPB41L2O43491 1005 aaKnown RBP23.17■■□□□ 1.3
SMG8-204ENST00000580498 B4GALT4O60513 344 aa23.17■■□□□ 1.3
SMG8-204ENST00000580498 ITGB8P26012 769 aa23.17■■□□□ 1.3
SMG8-204ENST00000580498 ARHGAP1Q07960 439 aa23.17■■□□□ 1.3
SMG8-204ENST00000580498 SLC35G1Q2M3R5 365 aa23.17■■□□□ 1.3
SMG8-204ENST00000580498 NBPF20Q3BBV1 942 aa23.17■■□□□ 1.3
SMG8-204ENST00000580498 ZNF697Q5TEC3 545 aa23.17■■□□□ 1.3
SMG8-204ENST00000580498 HEATR3Q7Z4Q2 680 aa23.17■■□□□ 1.3
SMG8-204ENST00000580498 RPUSD2Q8IZ73 545 aaKnown RBP23.17■■□□□ 1.3
SMG8-204ENST00000580498 PPTC7Q8NI37 304 aa23.17■■□□□ 1.3
SMG8-204ENST00000580498 JAKMIP1Q96N16 626 aaKnown RBP23.17■■□□□ 1.3
SMG8-204ENST00000580498 MLXIPQ9HAP2 919 aa23.17■■□□□ 1.3
SMG8-204ENST00000580498 KLF18A0A0U1RQI7 1052 aa23.16■■□□□ 1.3
SMG8-204ENST00000580498 SPDYE3A6NKU9 549 aa23.16■■□□□ 1.3
SMG8-204ENST00000580498 hCG_1984214I3L0E3 225 aa23.16■■□□□ 1.3
SMG8-204ENST00000580498 PIK3CDO00329 1044 aa23.16■■□□□ 1.3
SMG8-204ENST00000580498 SMAD3P84022 425 aaKnown RBP23.16■■□□□ 1.3
SMG8-204ENST00000580498 EXOSC10Q01780 885 aaKnown RBP23.16■■□□□ 1.3
SMG8-204ENST00000580498 C9orf50Q5SZB4 431 aa23.16■■□□□ 1.3
SMG8-204ENST00000580498 RAB11FIP4Q86YS3 637 aa23.16■■□□□ 1.3
SMG8-204ENST00000580498 TEX2Q8IWB9 1127 aa23.16■■□□□ 1.3
SMG8-204ENST00000580498 ZNF713Q8N859 430 aaPredicted RBP23.16■■□□□ 1.3
SMG8-204ENST00000580498 RETREG2Q8NC44 543 aa23.16■■□□□ 1.3
SMG8-204ENST00000580498 TRPV6Q9H1D0 765 aa23.16■■□□□ 1.3
SMG8-204ENST00000580498 GRIN2DO15399 1336 aa23.15■■□□□ 1.3
SMG8-204ENST00000580498 NOP56O00567 594 aaKnown RBP23.15■■□□□ 1.3
SMG8-204ENST00000580498 EIF5BO60841 1220 aaKnown RBP23.15■■□□□ 1.3
SMG8-204ENST00000580498 HSPA4P34932 840 aa23.15■■□□□ 1.3
SMG8-204ENST00000580498 BFSP2Q13515 415 aa23.15■■□□□ 1.3
SMG8-204ENST00000580498 NEDD9Q14511 834 aa23.15■■□□□ 1.3
SMG8-204ENST00000580498 FAM109BQ6ICB4 259 aaPredicted RBP23.15■■□□□ 1.3
SMG8-204ENST00000580498 NLRX1Q86UT6 975 aa23.15■■□□□ 1.3
SMG8-204ENST00000580498 RASEFQ8IZ41 740 aa23.15■■□□□ 1.3
SMG8-204ENST00000580498 CMTR1Q8N1G2 835 aaKnown RBP23.15■■□□□ 1.3
SMG8-204ENST00000580498 CDHR1Q96JP9 859 aa23.15■■□□□ 1.3
SMG8-204ENST00000580498 SPATA33Q96N06 139 aa23.15■■□□□ 1.3
SMG8-204ENST00000580498 GLT8D2Q9H1C3 349 aa23.15■■□□□ 1.3
SMG8-204ENST00000580498 SCN10AQ9Y5Y9 1956 aa23.14■■□□□ 1.3
SMG8-204ENST00000580498 GGPS1O95749 300 aa23.14■■□□□ 1.29
SMG8-204ENST00000580498 CSF2RAP15509 400 aa23.14■■□□□ 1.29
SMG8-204ENST00000580498 CYP2C18P33260 490 aa23.14■■□□□ 1.29
SMG8-204ENST00000580498 ADCK5Q3MIX3 580 aa23.14■■□□□ 1.29
SMG8-204ENST00000580498 CELF3Q5SZQ8 465 aaKnown RBP23.14■■□□□ 1.29
SMG8-204ENST00000580498 C7orf31Q8N865 590 aa23.14■■□□□ 1.29
SMG8-204ENST00000580498 TCEANC2Q96MN5 208 aa23.14■■□□□ 1.29
SMG8-204ENST00000580498 IL23AQ9NPF7 189 aa23.14■■□□□ 1.29
SMG8-204ENST00000580498 MYH7BA7E2Y1 1941 aa23.14■■□□□ 1.29
SMG8-204ENST00000580498 FIBPO43427 364 aa23.13■■□□□ 1.29
SMG8-204ENST00000580498 PPFIA4O75335 1185 aa23.13■■□□□ 1.29
SMG8-204ENST00000580498 PFKMP08237 780 aa23.13■■□□□ 1.29
SMG8-204ENST00000580498 METAP2P50579 478 aaKnown RBP eCLIP23.13■■□□□ 1.29
SMG8-204ENST00000580498 PCNX4Q63HM2 1172 aa23.13■■□□□ 1.29
SMG8-204ENST00000580498 PPP1R18Q6NYC8 613 aa23.13■■□□□ 1.29
SMG8-204ENST00000580498 USP17L6PQ6QN14 398 aa23.13■■□□□ 1.29
SMG8-204ENST00000580498 GIMAP8Q8ND71 665 aaPredicted RBP23.13■■□□□ 1.29
SMG8-204ENST00000580498 NOC4LQ9BVI4 516 aaKnown RBP23.13■■□□□ 1.29
SMG8-204ENST00000580498 TRMT13Q9NUP7 481 aaKnown RBP23.13■■□□□ 1.29
SMG8-204ENST00000580498 FRMPD4Q14CM0 1322 aa23.12■■□□□ 1.29
SMG8-204ENST00000580498 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.12■■□□□ 1.29
SMG8-204ENST00000580498 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms