RNA–Protein interactions for RNA: ENST00000579358.1

MKS1-208, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-208ENST00000579358 BRCA2P51587 3418 aa11.51□□□□□ -0.57
MKS1-208ENST00000579358 ST18O60284 1047 aa11.51□□□□□ -0.57
MKS1-208ENST00000579358 PGK1P00558 417 aa11.51□□□□□ -0.57
MKS1-208ENST00000579358 GNA11P29992 359 aa11.51□□□□□ -0.57
MKS1-208ENST00000579358 TTLL4Q14679 1199 aa11.51□□□□□ -0.57
MKS1-208ENST00000579358 GJC2Q5T442 439 aaPredicted RBP11.51□□□□□ -0.57
MKS1-208ENST00000579358 PCNX4Q63HM2 1172 aa11.51□□□□□ -0.57
MKS1-208ENST00000579358 KLHDC9Q8NEP7 349 aa11.51□□□□□ -0.57
MKS1-208ENST00000579358 IL31RAQ8NI17 732 aa11.51□□□□□ -0.57
MKS1-208ENST00000579358 ZSCAN31Q96LW9 406 aaPredicted RBP11.51□□□□□ -0.57
MKS1-208ENST00000579358 INPP4AQ96PE3 977 aaPredicted RBP11.51□□□□□ -0.57
MKS1-208ENST00000579358 WDR11Q9BZH6 1224 aa11.51□□□□□ -0.57
MKS1-208ENST00000579358 C6orf50Q9HD87 102 aa11.51□□□□□ -0.57
MKS1-208ENST00000579358 SH2B1Q9NRF2 756 aaPredicted RBP11.51□□□□□ -0.57
MKS1-208ENST00000579358 PCDHA6Q9UN73 950 aa11.51□□□□□ -0.57
MKS1-208ENST00000579358 PCDHA8Q9Y5H6 950 aa11.51□□□□□ -0.57
MKS1-208ENST00000579358 SMCHD1A6NHR9 2005 aa11.5□□□□□ -0.57
MKS1-208ENST00000579358 MOXD2PA6NHM9 499 aa11.5□□□□□ -0.57
MKS1-208ENST00000579358 PPFIA3O75145 1194 aa11.5□□□□□ -0.57
MKS1-208ENST00000579358 CTDNEP1O95476 244 aa11.5□□□□□ -0.57
MKS1-208ENST00000579358 C6orf222P0C671 652 aaPredicted RBP11.5□□□□□ -0.57
MKS1-208ENST00000579358 TXNP10599 105 aaKnown RBP11.5□□□□□ -0.57
MKS1-208ENST00000579358 MYCLP12524 364 aaPredicted RBP11.5□□□□□ -0.57
MKS1-208ENST00000579358 GNPTABQ3T906 1256 aa11.5□□□□□ -0.57
MKS1-208ENST00000579358 CCSAPQ6IQ19 270 aaPredicted RBP11.5□□□□□ -0.57
MKS1-208ENST00000579358 CCDC62Q6P9F0 684 aa11.5□□□□□ -0.57
MKS1-208ENST00000579358 KCNV1Q6PIU1 500 aa11.5□□□□□ -0.57
MKS1-208ENST00000579358 PCSK9Q8NBP7 692 aaKnown RBP11.5□□□□□ -0.57
MKS1-208ENST00000579358 BICD2Q8TD16 824 aa11.5□□□□□ -0.57
MKS1-208ENST00000579358 WASF1Q92558 559 aa11.5□□□□□ -0.57
MKS1-208ENST00000579358 AP5M1Q9H0R1 490 aa11.5□□□□□ -0.57
MKS1-208ENST00000579358 VPS54Q9P1Q0 977 aa11.5□□□□□ -0.57
MKS1-208ENST00000579358 PHF24Q9UPV7 400 aa11.5□□□□□ -0.57
MKS1-208ENST00000579358 MYADML2A6NDP7 307 aa11.49□□□□□ -0.57
MKS1-208ENST00000579358 CTAGE5O15320 804 aa11.49□□□□□ -0.57
MKS1-208ENST00000579358 DYNC1LI2O43237 492 aaPredicted RBP11.49□□□□□ -0.57
MKS1-208ENST00000579358 RGS20O76081 388 aa11.49□□□□□ -0.57
MKS1-208ENST00000579358 ARIH2O95376 493 aa11.49□□□□□ -0.57
MKS1-208ENST00000579358 TGFB3P10600 412 aa11.49□□□□□ -0.57
MKS1-208ENST00000579358 XBP1P17861 261 aa11.49□□□□□ -0.57
MKS1-208ENST00000579358 ICAM3P32942 547 aa11.49□□□□□ -0.57
MKS1-208ENST00000579358 MRPS9P82933 396 aaKnown RBP11.49□□□□□ -0.57
MKS1-208ENST00000579358 ST3GAL1Q11201 340 aa11.49□□□□□ -0.57
MKS1-208ENST00000579358 GALNT17Q6IS24 598 aa11.49□□□□□ -0.57
MKS1-208ENST00000579358 SEPT14Q6ZU15 432 aa11.49□□□□□ -0.57
MKS1-208ENST00000579358 REXO1Q8N1G1 1221 aaKnown RBP11.49□□□□□ -0.57
MKS1-208ENST00000579358 NECAB1Q8N987 351 aa11.49□□□□□ -0.57
MKS1-208ENST00000579358 DAGLBQ8NCG7 672 aa11.49□□□□□ -0.57
MKS1-208ENST00000579358 NSUN7Q8NE18 718 aaKnown RBP11.49□□□□□ -0.57
MKS1-208ENST00000579358 OR6J1Q8NGC5 347 aa11.49□□□□□ -0.57
MKS1-208ENST00000579358 ANO3Q9BYT9 981 aa11.49□□□□□ -0.57
MKS1-208ENST00000579358 MRVI1Q9Y6F6 885 aa11.49□□□□□ -0.57
MKS1-208ENST00000579358 KIAA0100Q14667 2235 aaKnown RBP11.48□□□□□ -0.57
MKS1-208ENST00000579358 FIBPO43427 364 aa11.48□□□□□ -0.57
MKS1-208ENST00000579358 ZEB2O60315 1214 aa11.48□□□□□ -0.57
MKS1-208ENST00000579358 GH1P01241 217 aa11.48□□□□□ -0.57
MKS1-208ENST00000579358 MYCNP04198 464 aaPredicted RBP11.48□□□□□ -0.57
MKS1-208ENST00000579358 SREBF1P36956 1147 aa11.48□□□□□ -0.57
MKS1-208ENST00000579358 MCM2P49736 904 aa11.48□□□□□ -0.57
MKS1-208ENST00000579358 CPT1AP50416 773 aa11.48□□□□□ -0.57
MKS1-208ENST00000579358 ACLYP53396 1101 aa11.48□□□□□ -0.57
MKS1-208ENST00000579358 NLRP5P59047 1200 aa11.48□□□□□ -0.57
MKS1-208ENST00000579358 KCNA10Q16322 511 aa11.48□□□□□ -0.57
MKS1-208ENST00000579358 FSCN1Q16658 493 aaKnown RBP11.48□□□□□ -0.57
MKS1-208ENST00000579358 GNASQ5JWF2 1037 aa11.48□□□□□ -0.57
MKS1-208ENST00000579358 TMEM63BQ5T3F8 832 aa11.48□□□□□ -0.57
MKS1-208ENST00000579358 C1orf53Q5VUE5 145 aa11.48□□□□□ -0.57
MKS1-208ENST00000579358 NLRX1Q86UT6 975 aa11.48□□□□□ -0.57
MKS1-208ENST00000579358 EMID1Q96A84 441 aaPredicted RBP11.48□□□□□ -0.57
MKS1-208ENST00000579358 GPRASP2Q96D09 838 aa11.48□□□□□ -0.57
MKS1-208ENST00000579358 CDHR1Q96JP9 859 aa11.48□□□□□ -0.57
MKS1-208ENST00000579358 LLPHQ9BRT6 129 aaKnown RBP11.48□□□□□ -0.57
MKS1-208ENST00000579358 SENP6Q9GZR1 1112 aaPredicted RBP11.48□□□□□ -0.57
MKS1-208ENST00000579358 ORC3Q9UBD5 711 aaPredicted RBP11.48□□□□□ -0.57
MKS1-208ENST00000579358 DDX41Q9UJV9 622 aaKnown RBP11.48□□□□□ -0.57
MKS1-208ENST00000579358 FRMPD3Q5JV73 1810 aa11.48□□□□□ -0.57
MKS1-208ENST00000579358 MYH6P13533 1939 aa11.48□□□□□ -0.57
MKS1-208ENST00000579358 BAZ2BQ9UIF8 2168 aaKnown RBP11.48□□□□□ -0.57
MKS1-208ENST00000579358 ELP1O95163 1332 aa11.47□□□□□ -0.57
MKS1-208ENST00000579358 A0A1W2PQ45 241 aaPredicted RBP11.47□□□□□ -0.57
MKS1-208ENST00000579358 A0A1W2PQY0 241 aa11.47□□□□□ -0.57
MKS1-208ENST00000579358 SPATA31C2B4DYI2 1134 aa11.47□□□□□ -0.57
MKS1-208ENST00000579358 CABYRO75952 493 aa11.47□□□□□ -0.57
MKS1-208ENST00000579358 ASGR1P07306 291 aa11.47□□□□□ -0.57
MKS1-208ENST00000579358 FDPSP14324 419 aaKnown RBP11.47□□□□□ -0.57
MKS1-208ENST00000579358 IRX5P78411 483 aaPredicted RBP11.47□□□□□ -0.57
MKS1-208ENST00000579358 ARHGAP1Q07960 439 aa11.47□□□□□ -0.57
MKS1-208ENST00000579358 SNX17Q15036 470 aa11.47□□□□□ -0.57
MKS1-208ENST00000579358 LY6KQ17RY6 165 aa11.47□□□□□ -0.57
MKS1-208ENST00000579358 BRDTQ58F21 947 aaPredicted RBP11.47□□□□□ -0.57
MKS1-208ENST00000579358 CCDC83Q8IWF9 413 aa11.47□□□□□ -0.57
MKS1-208ENST00000579358 COPS5Q92905 334 aa11.47□□□□□ -0.57
MKS1-208ENST00000579358 PGBD1Q96JS3 809 aa11.47□□□□□ -0.57
MKS1-208ENST00000579358 GLT1D1Q96MS3 346 aa11.47□□□□□ -0.57
MKS1-208ENST00000579358 AIFM3Q96NN9 605 aa11.47□□□□□ -0.57
MKS1-208ENST00000579358 PHF20Q9BVI0 1012 aa11.47□□□□□ -0.57
MKS1-208ENST00000579358 TMEM260Q9NX78 707 aa11.47□□□□□ -0.57
MKS1-208ENST00000579358 PCDHA4Q9UN74 947 aa11.47□□□□□ -0.57
MKS1-208ENST00000579358 UBIAD1Q9Y5Z9 338 aa11.47□□□□□ -0.57
MKS1-208ENST00000579358 A6NJR5 290 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms