RNA–Protein interactions for RNA: ENST00000579238.1

CASC3-206, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-206ENST00000579238 CCDC178Q5BJE1 867 aa10.01□□□□□ -0.81
CASC3-206ENST00000579238 MCF2L2Q86YR7 1114 aa10.01□□□□□ -0.81
CASC3-206ENST00000579238 TBC1D5Q92609 795 aa10.01□□□□□ -0.81
CASC3-206ENST00000579238 DHX38Q92620 1227 aaKnown RBP10.01□□□□□ -0.81
CASC3-206ENST00000579238 TAAR1Q96RJ0 339 aa10.01□□□□□ -0.81
CASC3-206ENST00000579238 RMDN3Q96TC7 470 aa10.01□□□□□ -0.81
CASC3-206ENST00000579238 ZBED2Q9BTP6 218 aa10.01□□□□□ -0.81
CASC3-206ENST00000579238 KATNAL1Q9BW62 490 aa10.01□□□□□ -0.81
CASC3-206ENST00000579238 CPVLQ9H3G5 476 aa10.01□□□□□ -0.81
CASC3-206ENST00000579238 COL20A1Q9P218 1284 aa10.01□□□□□ -0.81
CASC3-206ENST00000579238 GTF2IRD1Q9UHL9 959 aa10.01□□□□□ -0.81
CASC3-206ENST00000579238 ABHD14A-ACY1A0A1B0GW23 586 aa10□□□□□ -0.81
CASC3-206ENST00000579238 LCHNA4D1U4 455 aa10□□□□□ -0.81
CASC3-206ENST00000579238 NBNO60934 754 aa10□□□□□ -0.81
CASC3-206ENST00000579238 EFCAB14O75071 495 aa10□□□□□ -0.81
CASC3-206ENST00000579238 CKBP12277 381 aa10□□□□□ -0.81
CASC3-206ENST00000579238 DEFB103AP81534 67 aa10□□□□□ -0.81
CASC3-206ENST00000579238 ASPRV1Q53RT3 343 aa10□□□□□ -0.81
CASC3-206ENST00000579238 CHST3Q7LGC8 479 aa10□□□□□ -0.81
CASC3-206ENST00000579238 SPRED2Q7Z698 418 aa10□□□□□ -0.81
CASC3-206ENST00000579238 IQCA1Q86XH1 822 aa10□□□□□ -0.81
CASC3-206ENST00000579238 ADGRF4Q8IZF3 695 aa10□□□□□ -0.81
CASC3-206ENST00000579238 PNMA1Q8ND90 353 aa10□□□□□ -0.81
CASC3-206ENST00000579238 ANKS1AQ92625 1134 aa10□□□□□ -0.81
CASC3-206ENST00000579238 EMID1Q96A84 441 aaPredicted RBP10□□□□□ -0.81
CASC3-206ENST00000579238 RAD9AQ99638 391 aa10□□□□□ -0.81
CASC3-206ENST00000579238 ZKSCAN3Q9BRR0 538 aa10□□□□□ -0.81
CASC3-206ENST00000579238 EPHX3Q9H6B9 360 aa10□□□□□ -0.81
CASC3-206ENST00000579238 HDAC6Q9UBN7 1215 aa10□□□□□ -0.81
CASC3-206ENST00000579238 DDX41Q9UJV9 622 aaKnown RBP10□□□□□ -0.81
CASC3-206ENST00000579238 MRPL11Q9Y3B7 192 aaKnown RBP10□□□□□ -0.81
CASC3-206ENST00000579238 ARIH1Q9Y4X5 557 aaPredicted RBP10□□□□□ -0.81
CASC3-206ENST00000579238 TRIP12Q14669 1992 aaPredicted RBP10□□□□□ -0.81
CASC3-206ENST00000579238 NEDD4P46934 1319 aa10□□□□□ -0.81
CASC3-206ENST00000579238 TRIM6-TRIM34B2RNG4 842 aa9.99□□□□□ -0.81
CASC3-206ENST00000579238 HAS3O00219 553 aa9.99□□□□□ -0.81
CASC3-206ENST00000579238 ZNF213O14771 459 aa9.99□□□□□ -0.81
CASC3-206ENST00000579238 EIF3JO75822 258 aaKnown RBP9.99□□□□□ -0.81
CASC3-206ENST00000579238 GJB5O95377 273 aa9.99□□□□□ -0.81
CASC3-206ENST00000579238 F2P00734 622 aa9.99□□□□□ -0.81
CASC3-206ENST00000579238 PSEN2P49810 448 aa9.99□□□□□ -0.81
CASC3-206ENST00000579238 ERVK-21P61565 698 aa9.99□□□□□ -0.81
CASC3-206ENST00000579238 PTK7Q13308 1070 aa9.99□□□□□ -0.81
CASC3-206ENST00000579238 HDAC1Q13547 482 aaPredicted RBP9.99□□□□□ -0.81
CASC3-206ENST00000579238 LAMC2Q13753 1193 aa9.99□□□□□ -0.81
CASC3-206ENST00000579238 MFSD10Q14728 455 aa9.99□□□□□ -0.81
CASC3-206ENST00000579238 QRICH1Q2TAL8 776 aa9.99□□□□□ -0.81
CASC3-206ENST00000579238 ARHGEF16Q5VV41 709 aa9.99□□□□□ -0.81
CASC3-206ENST00000579238 TMCO2Q7Z6W1 182 aaPredicted RBP9.99□□□□□ -0.81
CASC3-206ENST00000579238 FBXO11Q86XK2 927 aa9.99□□□□□ -0.81
CASC3-206ENST00000579238 C7orf31Q8N865 590 aa9.99□□□□□ -0.81
CASC3-206ENST00000579238 PPTC7Q8NI37 304 aa9.99□□□□□ -0.81
CASC3-206ENST00000579238 GDPD5Q8WTR4 605 aa9.99□□□□□ -0.81
CASC3-206ENST00000579238 TGS1Q96RS0 853 aaKnown RBP9.99□□□□□ -0.81
CASC3-206ENST00000579238 LRFN3Q9BTN0 628 aa9.99□□□□□ -0.81
CASC3-206ENST00000579238 KAT14Q9H8E8 782 aa9.99□□□□□ -0.81
CASC3-206ENST00000579238 SUGCTQ9HAC7 445 aa9.99□□□□□ -0.81
CASC3-206ENST00000579238 TRANK1O15050 2925 aa9.99□□□□□ -0.81
CASC3-206ENST00000579238 PTPRSQ13332 1948 aa9.98□□□□□ -0.81
CASC3-206ENST00000579238 KDM4AO75164 1064 aa9.98□□□□□ -0.81
CASC3-206ENST00000579238 NR3C2P08235 984 aa9.98□□□□□ -0.81
CASC3-206ENST00000579238 PARP1P09874 1014 aaKnown RBP9.98□□□□□ -0.81
CASC3-206ENST00000579238 HOXD8P13378 290 aaPredicted RBP9.98□□□□□ -0.81
CASC3-206ENST00000579238 EIF2AK2P19525 551 aaKnown RBP9.98□□□□□ -0.81
CASC3-206ENST00000579238 SDSP20132 328 aa9.98□□□□□ -0.81
CASC3-206ENST00000579238 IKBKEQ14164 716 aa9.98□□□□□ -0.81
CASC3-206ENST00000579238 KIAA0753Q2KHM9 967 aa9.98□□□□□ -0.81
CASC3-206ENST00000579238 TCTN1Q2MV58 587 aa9.98□□□□□ -0.81
CASC3-206ENST00000579238 TRIM71Q2Q1W2 868 aaKnown RBP9.98□□□□□ -0.81
CASC3-206ENST00000579238 TMEM31Q5JXX7 168 aa9.98□□□□□ -0.81
CASC3-206ENST00000579238 TRAF7Q6Q0C0 670 aa9.98□□□□□ -0.81
CASC3-206ENST00000579238 DHX37Q8IY37 1157 aaKnown RBP9.98□□□□□ -0.81
CASC3-206ENST00000579238 RILPL2Q969X0 211 aa9.98□□□□□ -0.81
CASC3-206ENST00000579238 ALG1Q9BT22 464 aa9.98□□□□□ -0.81
CASC3-206ENST00000579238 JMJD4Q9H9V9 463 aa9.98□□□□□ -0.81
CASC3-206ENST00000579238 PXMP2Q9NR77 195 aa9.98□□□□□ -0.81
CASC3-206ENST00000579238 HCN4Q9Y3Q4 1203 aa9.98□□□□□ -0.81
CASC3-206ENST00000579238 MRVI1Q9Y6F6 885 aa9.98□□□□□ -0.81
CASC3-206ENST00000579238 COL4A4P53420 1690 aaPredicted RBP9.97□□□□□ -0.81
CASC3-206ENST00000579238 LINC01553A4QN01 128 aa9.97□□□□□ -0.81
CASC3-206ENST00000579238 B4E1Z4 1266 aa9.97□□□□□ -0.81
CASC3-206ENST00000579238 DHX16O60231 1041 aaKnown RBP9.97□□□□□ -0.81
CASC3-206ENST00000579238 GPR37L1O60883 481 aa9.97□□□□□ -0.81
CASC3-206ENST00000579238 PPFIA4O75335 1185 aa9.97□□□□□ -0.81
CASC3-206ENST00000579238 LGR5O75473 907 aa9.97□□□□□ -0.81
CASC3-206ENST00000579238 CFBP00751 764 aa9.97□□□□□ -0.81
CASC3-206ENST00000579238 ZNF286BP0CG31 522 aa9.97□□□□□ -0.81
CASC3-206ENST00000579238 HSD17B4P51659 736 aa9.97□□□□□ -0.81
CASC3-206ENST00000579238 RRP1P56182 461 aaKnown RBP9.97□□□□□ -0.81
CASC3-206ENST00000579238 GHRHRQ02643 423 aa9.97□□□□□ -0.81
CASC3-206ENST00000579238 ZNF618Q5T7W0 954 aa9.97□□□□□ -0.81
CASC3-206ENST00000579238 KCNV1Q6PIU1 500 aa9.97□□□□□ -0.81
CASC3-206ENST00000579238 ENAHQ8N8S7 591 aaPredicted RBP9.97□□□□□ -0.81
CASC3-206ENST00000579238 WNT8BQ93098 351 aa9.97□□□□□ -0.81
CASC3-206ENST00000579238 CRBNQ96SW2 442 aa9.97□□□□□ -0.81
CASC3-206ENST00000579238 ZSCAN10Q96SZ4 725 aaPredicted RBP9.97□□□□□ -0.81
CASC3-206ENST00000579238 LNPKQ9C0E8 428 aa9.97□□□□□ -0.81
CASC3-206ENST00000579238 UBE2ZQ9H832 354 aaPredicted RBP9.97□□□□□ -0.81
CASC3-206ENST00000579238 VAT1LQ9HCJ6 419 aa9.97□□□□□ -0.81
CASC3-206ENST00000579238 MAP3K20Q9NYL2 800 aaKnown RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms