RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 SP100P23497 879 aaPredicted RBP13.29□□□□□ -0.28
GGA3-206ENST00000578773 DNAJB1P25685 340 aa13.29□□□□□ -0.28
GGA3-206ENST00000578773 NDUFV1P49821 464 aa13.29□□□□□ -0.28
GGA3-206ENST00000578773 OAZ1P54368 228 aa13.29□□□□□ -0.28
GGA3-206ENST00000578773 PTPN21Q16825 1174 aa13.29□□□□□ -0.28
GGA3-206ENST00000578773 SLC9C2Q5TAH2 1124 aa13.29□□□□□ -0.28
GGA3-206ENST00000578773 NSMFQ6X4W1 530 aa13.29□□□□□ -0.28
GGA3-206ENST00000578773 CCDC155Q8N6L0 562 aa13.29□□□□□ -0.28
GGA3-206ENST00000578773 SMRP1Q8NCR6 262 aa13.29□□□□□ -0.28
GGA3-206ENST00000578773 SAMD11Q96NU1 681 aa13.29□□□□□ -0.28
GGA3-206ENST00000578773 YME1L1Q96TA2 773 aa13.29□□□□□ -0.28
GGA3-206ENST00000578773 OTOGLQ3ZCN5 2332 aa13.29□□□□□ -0.28
GGA3-206ENST00000578773 PKD1L2Q7Z442 2459 aa13.28□□□□□ -0.28
GGA3-206ENST00000578773 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.28□□□□□ -0.28
GGA3-206ENST00000578773 IGSF3O75054 1194 aa13.28□□□□□ -0.28
GGA3-206ENST00000578773 AMHP03971 560 aa13.28□□□□□ -0.28
GGA3-206ENST00000578773 ALDH5A1P51649 535 aaPredicted RBP13.28□□□□□ -0.28
GGA3-206ENST00000578773 ALDH1L2Q3SY69 923 aa13.28□□□□□ -0.28
GGA3-206ENST00000578773 CLIP2Q9UDT6 1046 aa13.28□□□□□ -0.28
GGA3-206ENST00000578773 FEM1BQ9UK73 627 aa13.28□□□□□ -0.28
GGA3-206ENST00000578773 LOXHD1Q8IVV2 1947 aa13.28□□□□□ -0.28
GGA3-206ENST00000578773 DOCK5Q9H7D0 1870 aa13.27□□□□□ -0.28
GGA3-206ENST00000578773 IGKV6D-41A0A0C4DH26 115 aa13.27□□□□□ -0.29
GGA3-206ENST00000578773 GNAI3P08754 354 aa13.27□□□□□ -0.29
GGA3-206ENST00000578773 ICAM3P32942 547 aa13.27□□□□□ -0.29
GGA3-206ENST00000578773 OS9Q13438 667 aaPredicted RBP13.27□□□□□ -0.29
GGA3-206ENST00000578773 POLA2Q14181 598 aa13.27□□□□□ -0.29
GGA3-206ENST00000578773 CTR9Q6PD62 1173 aa13.27□□□□□ -0.29
GGA3-206ENST00000578773 MRS2Q9HD23 443 aa13.27□□□□□ -0.29
GGA3-206ENST00000578773 NYAP2Q9P242 653 aa13.27□□□□□ -0.29
GGA3-206ENST00000578773 HDAC6Q9UBN7 1215 aa13.27□□□□□ -0.29
GGA3-206ENST00000578773 TMEM232C9JQI7 657 aa13.26□□□□□ -0.29
GGA3-206ENST00000578773 NCK2O43639 380 aa13.26□□□□□ -0.29
GGA3-206ENST00000578773 EFCAB14O75071 495 aa13.26□□□□□ -0.29
GGA3-206ENST00000578773 BCAR3O75815 825 aa13.26□□□□□ -0.29
GGA3-206ENST00000578773 SLC30A10Q6XR72 485 aa13.26□□□□□ -0.29
GGA3-206ENST00000578773 SESTD1Q86VW0 696 aa13.26□□□□□ -0.29
GGA3-206ENST00000578773 GTF2IRD1Q9UHL9 959 aa13.26□□□□□ -0.29
GGA3-206ENST00000578773 CDH22Q9UJ99 828 aa13.26□□□□□ -0.29
GGA3-206ENST00000578773 HDAC5Q9UQL6 1122 aa13.26□□□□□ -0.29
GGA3-206ENST00000578773 ZBED9Q6R2W3 1325 aa13.25□□□□□ -0.29
GGA3-206ENST00000578773 NFIBO00712 420 aa13.25□□□□□ -0.29
GGA3-206ENST00000578773 HOXB3P14651 431 aaPredicted RBP13.25□□□□□ -0.29
GGA3-206ENST00000578773 BAATQ14032 418 aaPredicted RBP13.25□□□□□ -0.29
GGA3-206ENST00000578773 PPP2R5BQ15173 497 aa13.25□□□□□ -0.29
GGA3-206ENST00000578773 VN1R2Q8NFZ6 395 aa13.25□□□□□ -0.29
GGA3-206ENST00000578773 AFG1LQ8WV93 481 aa13.25□□□□□ -0.29
GGA3-206ENST00000578773 TOP1MTQ969P6 601 aa13.25□□□□□ -0.29
GGA3-206ENST00000578773 ALG1Q9BT22 464 aa13.25□□□□□ -0.29
GGA3-206ENST00000578773 PHF7Q9BWX1 381 aaPredicted RBP13.25□□□□□ -0.29
GGA3-206ENST00000578773 API5Q9BZZ5 524 aaKnown RBP13.25□□□□□ -0.29
GGA3-206ENST00000578773 ISY1Q9ULR0 285 aaKnown RBP13.25□□□□□ -0.29
GGA3-206ENST00000578773 C5orf67F2Z3F1 127 aa13.24□□□□□ -0.29
GGA3-206ENST00000578773 SURF6O75683 361 aaKnown RBP13.24□□□□□ -0.29
GGA3-206ENST00000578773 BRD1O95696 1058 aa13.24□□□□□ -0.29
GGA3-206ENST00000578773 GNAI2P04899 355 aa13.24□□□□□ -0.29
GGA3-206ENST00000578773 MMP3P08254 477 aa13.24□□□□□ -0.29
GGA3-206ENST00000578773 COASYQ13057 564 aa13.24□□□□□ -0.29
GGA3-206ENST00000578773 ST3GAL2Q16842 350 aa13.24□□□□□ -0.29
GGA3-206ENST00000578773 PLEKHG4Q58EX7 1191 aa13.24□□□□□ -0.29
GGA3-206ENST00000578773 RBM23Q86U06 439 aaKnown RBP13.24□□□□□ -0.29
GGA3-206ENST00000578773 CEP95Q96GE4 821 aa13.24□□□□□ -0.29
GGA3-206ENST00000578773 C1orf115Q9H7X2 142 aa13.24□□□□□ -0.29
GGA3-206ENST00000578773 TTC3P53804 2025 aa13.23□□□□□ -0.29
GGA3-206ENST00000578773 FRYQ5TBA9 3013 aa13.23□□□□□ -0.29
GGA3-206ENST00000578773 GOLIM4O00461 696 aa13.23□□□□□ -0.29
GGA3-206ENST00000578773 MMP1P03956 469 aa13.23□□□□□ -0.29
GGA3-206ENST00000578773 BMP3P12645 472 aa13.23□□□□□ -0.29
GGA3-206ENST00000578773 BMPR1AP36894 532 aa13.23□□□□□ -0.29
GGA3-206ENST00000578773 NRIP1P48552 1158 aa13.23□□□□□ -0.29
GGA3-206ENST00000578773 NUBP1P53384 320 aa13.23□□□□□ -0.29
GGA3-206ENST00000578773 SLFN13Q68D06 897 aa13.23□□□□□ -0.29
GGA3-206ENST00000578773 DCLK2Q8N568 766 aa13.23□□□□□ -0.29
GGA3-206ENST00000578773 IFIH1Q9BYX4 1025 aaKnown RBP13.23□□□□□ -0.29
GGA3-206ENST00000578773 ATP8A2Q9NTI2 1148 aa13.23□□□□□ -0.29
GGA3-206ENST00000578773 PI15O43692 258 aa13.22□□□□□ -0.29
GGA3-206ENST00000578773 KPNA6O60684 536 aa13.22□□□□□ -0.29
GGA3-206ENST00000578773 PRDM1O75626 825 aa13.22□□□□□ -0.29
GGA3-206ENST00000578773 PARNO95453 639 aaKnown RBP13.22□□□□□ -0.29
GGA3-206ENST00000578773 ZNF286BP0CG31 522 aa13.22□□□□□ -0.29
GGA3-206ENST00000578773 TXNP10599 105 aaKnown RBP13.22□□□□□ -0.29
GGA3-206ENST00000578773 PTK7Q13308 1070 aa13.22□□□□□ -0.29
GGA3-206ENST00000578773 CWF19L1Q69YN2 538 aaKnown RBP13.22□□□□□ -0.29
GGA3-206ENST00000578773 MCTP2Q6DN12 878 aa13.22□□□□□ -0.29
GGA3-206ENST00000578773 KCTD1Q719H9 257 aa13.22□□□□□ -0.29
GGA3-206ENST00000578773 CHST3Q7LGC8 479 aa13.22□□□□□ -0.29
GGA3-206ENST00000578773 FIBCD1Q8N539 461 aa13.22□□□□□ -0.29
GGA3-206ENST00000578773 EFHBQ8N7U6 833 aa13.22□□□□□ -0.29
GGA3-206ENST00000578773 KREMEN2Q8NCW0 462 aa13.22□□□□□ -0.29
GGA3-206ENST00000578773 SSH3Q8TE77 659 aa13.22□□□□□ -0.29
GGA3-206ENST00000578773 SUSD6Q92537 303 aa13.22□□□□□ -0.29
GGA3-206ENST00000578773 DNAJC2Q99543 621 aaKnown RBP13.22□□□□□ -0.29
GGA3-206ENST00000578773 APOL5Q9BWW9 433 aa13.22□□□□□ -0.29
GGA3-206ENST00000578773 LMAN2LQ9H0V9 348 aa13.22□□□□□ -0.29
GGA3-206ENST00000578773 RC3H2Q9HBD1 1191 aaKnown RBP13.22□□□□□ -0.29
GGA3-206ENST00000578773 DLL3Q9NYJ7 618 aa13.22□□□□□ -0.29
GGA3-206ENST00000578773 RAD50Q92878 1312 aa13.21□□□□□ -0.29
GGA3-206ENST00000578773 PSEN2P49810 448 aa13.21□□□□□ -0.29
GGA3-206ENST00000578773 STAT2P52630 851 aa13.21□□□□□ -0.29
GGA3-206ENST00000578773 PDE4BQ07343 736 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms