RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 ST18O60284 1047 aa24.89■■□□□ 1.58
CDC42EP4-203ENST00000578516 CDKL5O76039 1030 aa24.89■■□□□ 1.58
CDC42EP4-203ENST00000578516 CCND2P30279 289 aa24.89■■□□□ 1.58
CDC42EP4-203ENST00000578516 BEX3Q00994 111 aa24.89■■□□□ 1.58
CDC42EP4-203ENST00000578516 PWP2Q15269 919 aaKnown RBP24.89■■□□□ 1.58
CDC42EP4-203ENST00000578516 NPY5RQ15761 445 aa24.89■■□□□ 1.58
CDC42EP4-203ENST00000578516 STXBP2Q15833 593 aa24.89■■□□□ 1.58
CDC42EP4-203ENST00000578516 TLK2Q86UE8 772 aa24.89■■□□□ 1.58
CDC42EP4-203ENST00000578516 ZMYND12Q9H0C1 365 aa24.89■■□□□ 1.58
CDC42EP4-203ENST00000578516 RBM47A0AV96 593 aaKnown RBP24.88■■□□□ 1.57
CDC42EP4-203ENST00000578516 MRPL12P52815 198 aaKnown RBP24.88■■□□□ 1.57
CDC42EP4-203ENST00000578516 VSIG10LQ86VR7 867 aa24.88■■□□□ 1.57
CDC42EP4-203ENST00000578516 MPHOSPH6Q99547 160 aaKnown RBP24.88■■□□□ 1.57
CDC42EP4-203ENST00000578516 PCDH10Q9P2E7 1040 aa24.88■■□□□ 1.57
CDC42EP4-203ENST00000578516 SPDYE3A6NKU9 549 aa24.87■■□□□ 1.57
CDC42EP4-203ENST00000578516 DUSP11O75319 330 aaKnown RBP24.87■■□□□ 1.57
CDC42EP4-203ENST00000578516 RGS19P49795 217 aa24.87■■□□□ 1.57
CDC42EP4-203ENST00000578516 NLRP5P59047 1200 aa24.87■■□□□ 1.57
CDC42EP4-203ENST00000578516 SEMA3FQ13275 785 aa24.87■■□□□ 1.57
CDC42EP4-203ENST00000578516 LY6KQ17RY6 165 aa24.87■■□□□ 1.57
CDC42EP4-203ENST00000578516 ALG1Q9BT22 464 aa24.87■■□□□ 1.57
CDC42EP4-203ENST00000578516 BCAS3Q9H6U6 928 aa24.87■■□□□ 1.57
CDC42EP4-203ENST00000578516 C6orf50Q9HD87 102 aa24.87■■□□□ 1.57
CDC42EP4-203ENST00000578516 DYNC1LI2O43237 492 aaPredicted RBP24.86■■□□□ 1.57
CDC42EP4-203ENST00000578516 C6orf222P0C671 652 aaPredicted RBP24.86■■□□□ 1.57
CDC42EP4-203ENST00000578516 IQSEC1Q6DN90 963 aa24.86■■□□□ 1.57
CDC42EP4-203ENST00000578516 CCDC62Q6P9F0 684 aa24.86■■□□□ 1.57
CDC42EP4-203ENST00000578516 CCDC148Q8NFR7 591 aa24.86■■□□□ 1.57
CDC42EP4-203ENST00000578516 SCFD2Q8WU76 684 aa24.86■■□□□ 1.57
CDC42EP4-203ENST00000578516 FERMT2Q96AC1 680 aa24.86■■□□□ 1.57
CDC42EP4-203ENST00000578516 TMX3Q96JJ7 454 aa24.86■■□□□ 1.57
CDC42EP4-203ENST00000578516 ZSCAN31Q96LW9 406 aaPredicted RBP24.86■■□□□ 1.57
CDC42EP4-203ENST00000578516 UPF3AQ9H1J1 476 aaKnown RBP24.86■■□□□ 1.57
CDC42EP4-203ENST00000578516 B4DLN1 442 aa24.85■■□□□ 1.57
CDC42EP4-203ENST00000578516 EIF3JO75822 258 aaKnown RBP24.85■■□□□ 1.57
CDC42EP4-203ENST00000578516 TXNP10599 105 aaKnown RBP24.85■■□□□ 1.57
CDC42EP4-203ENST00000578516 DUSP28Q4G0W2 176 aa24.85■■□□□ 1.57
CDC42EP4-203ENST00000578516 REXO1Q8N1G1 1221 aaKnown RBP24.85■■□□□ 1.57
CDC42EP4-203ENST00000578516 CCDC12Q8WUD4 166 aaPredicted RBP24.85■■□□□ 1.57
CDC42EP4-203ENST00000578516 SH2B1Q9NRF2 756 aaPredicted RBP24.85■■□□□ 1.57
CDC42EP4-203ENST00000578516 DNM1LO00429 736 aa24.84■■□□□ 1.57
CDC42EP4-203ENST00000578516 GJA9P57773 515 aa24.84■■□□□ 1.57
CDC42EP4-203ENST00000578516 PCNX4Q63HM2 1172 aa24.84■■□□□ 1.57
CDC42EP4-203ENST00000578516 ANKLE1Q8NAG6 615 aa24.84■■□□□ 1.57
CDC42EP4-203ENST00000578516 KLHDC9Q8NEP7 349 aa24.84■■□□□ 1.57
CDC42EP4-203ENST00000578516 OR6J1Q8NGC5 347 aa24.84■■□□□ 1.57
CDC42EP4-203ENST00000578516 OXER1Q8TDS5 423 aa24.84■■□□□ 1.57
CDC42EP4-203ENST00000578516 SH3GLB2Q9NR46 395 aa24.84■■□□□ 1.57
CDC42EP4-203ENST00000578516 TELO2Q9Y4R8 837 aa24.84■■□□□ 1.57
CDC42EP4-203ENST00000578516 MRVI1Q9Y6F6 885 aa24.84■■□□□ 1.57
CDC42EP4-203ENST00000578516 COL6A1P12109 1028 aa24.83■■□□□ 1.57
CDC42EP4-203ENST00000578516 SP2Q02086 613 aa24.83■■□□□ 1.57
CDC42EP4-203ENST00000578516 GUCY1B3Q02153 619 aa24.83■■□□□ 1.57
CDC42EP4-203ENST00000578516 TTLL4Q14679 1199 aa24.83■■□□□ 1.57
CDC42EP4-203ENST00000578516 CYP2W1Q8TAV3 490 aa24.83■■□□□ 1.57
CDC42EP4-203ENST00000578516 UIMC1Q96RL1 719 aa24.83■■□□□ 1.57
CDC42EP4-203ENST00000578516 PHF20Q9BVI0 1012 aa24.83■■□□□ 1.57
CDC42EP4-203ENST00000578516 C11orf49Q9H6J7 331 aa24.83■■□□□ 1.57
CDC42EP4-203ENST00000578516 PKD2L1Q9P0L9 805 aa24.83■■□□□ 1.57
CDC42EP4-203ENST00000578516 PCDHA4Q9UN74 947 aa24.83■■□□□ 1.57
CDC42EP4-203ENST00000578516 KBTBD13C9JR72 458 aa24.82■■□□□ 1.56
CDC42EP4-203ENST00000578516 ITGB5P18084 799 aa24.82■■□□□ 1.56
CDC42EP4-203ENST00000578516 UBA1P22314 1058 aaKnown RBP24.82■■□□□ 1.56
CDC42EP4-203ENST00000578516 ARHGAP1Q07960 439 aa24.82■■□□□ 1.56
CDC42EP4-203ENST00000578516 AP3B2Q13367 1082 aa24.82■■□□□ 1.56
CDC42EP4-203ENST00000578516 CCSAPQ6IQ19 270 aaPredicted RBP24.82■■□□□ 1.56
CDC42EP4-203ENST00000578516 ARRDC4Q8NCT1 418 aa24.82■■□□□ 1.56
CDC42EP4-203ENST00000578516 PPP1R13LQ8WUF5 828 aa24.82■■□□□ 1.56
CDC42EP4-203ENST00000578516 INPP4AQ96PE3 977 aaPredicted RBP24.82■■□□□ 1.56
CDC42EP4-203ENST00000578516 SENP6Q9GZR1 1112 aaPredicted RBP24.82■■□□□ 1.56
CDC42EP4-203ENST00000578516 DDX41Q9UJV9 622 aaKnown RBP24.82■■□□□ 1.56
CDC42EP4-203ENST00000578516 FAM205CA6NFA0 338 aa24.81■■□□□ 1.56
CDC42EP4-203ENST00000578516 EDIL3O43854 480 aa24.81■■□□□ 1.56
CDC42EP4-203ENST00000578516 GNA11P29992 359 aa24.81■■□□□ 1.56
CDC42EP4-203ENST00000578516 SREBF1P36956 1147 aa24.81■■□□□ 1.56
CDC42EP4-203ENST00000578516 ATN1P54259 1190 aaPredicted RBP24.81■■□□□ 1.56
CDC42EP4-203ENST00000578516 ARHGAP4P98171 946 aa24.81■■□□□ 1.56
CDC42EP4-203ENST00000578516 KCNA10Q16322 511 aa24.81■■□□□ 1.56
CDC42EP4-203ENST00000578516 NECAB2Q7Z6G3 386 aa24.81■■□□□ 1.56
CDC42EP4-203ENST00000578516 RNF180Q86T96 592 aa24.81■■□□□ 1.56
CDC42EP4-203ENST00000578516 BLIDQ8IZY5 108 aa24.81■■□□□ 1.56
CDC42EP4-203ENST00000578516 AP5M1Q9H0R1 490 aa24.81■■□□□ 1.56
CDC42EP4-203ENST00000578516 UBIAD1Q9Y5Z9 338 aa24.81■■□□□ 1.56
CDC42EP4-203ENST00000578516 M0R2N6 131 aa24.8■■□□□ 1.56
CDC42EP4-203ENST00000578516 FSCN1Q16658 493 aaKnown RBP24.8■■□□□ 1.56
CDC42EP4-203ENST00000578516 FOSP01100 380 aaPredicted RBP24.79■■□□□ 1.56
CDC42EP4-203ENST00000578516 CST5P28325 142 aaPredicted RBP24.79■■□□□ 1.56
CDC42EP4-203ENST00000578516 MLLT1Q03111 559 aaPredicted RBP24.79■■□□□ 1.56
CDC42EP4-203ENST00000578516 LRRC26Q2I0M4 334 aa24.79■■□□□ 1.56
CDC42EP4-203ENST00000578516 EARS2Q5JPH6 523 aaKnown RBP24.79■■□□□ 1.56
CDC42EP4-203ENST00000578516 GNASQ5JWF2 1037 aa24.79■■□□□ 1.56
CDC42EP4-203ENST00000578516 DAGLBQ8NCG7 672 aa24.79■■□□□ 1.56
CDC42EP4-203ENST00000578516 AFG1LQ8WV93 481 aa24.79■■□□□ 1.56
CDC42EP4-203ENST00000578516 CRYGNQ8WXF5 182 aa24.79■■□□□ 1.56
CDC42EP4-203ENST00000578516 GLT8D2Q9H1C3 349 aa24.79■■□□□ 1.56
CDC42EP4-203ENST00000578516 EHMT1Q9H9B1 1298 aa24.79■■□□□ 1.56
CDC42EP4-203ENST00000578516 PHF24Q9UPV7 400 aa24.79■■□□□ 1.56
CDC42EP4-203ENST00000578516 A0A1W2PQ45 241 aaPredicted RBP24.78■■□□□ 1.56
CDC42EP4-203ENST00000578516 A0A1W2PQY0 241 aa24.78■■□□□ 1.56
CDC42EP4-203ENST00000578516 GGPS1O95749 300 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms