RNA–Protein interactions for RNA: ENST00000578252.1

TRAPPC8-204, Transcript of trafficking protein particle complex 8, humanhuman

TSL 3

Gene TRAPPC8, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-204ENST00000578252 GPR25O00155 361 aa12.79□□□□□ -0.36
TRAPPC8-204ENST00000578252 ZSCAN22P10073 491 aaPredicted RBP12.79□□□□□ -0.36
TRAPPC8-204ENST00000578252 COL9A1P20849 921 aa12.79□□□□□ -0.36
TRAPPC8-204ENST00000578252 U2AF2P26368 475 aaKnown RBP eCLIP12.79□□□□□ -0.36
TRAPPC8-204ENST00000578252 RPS6P62753 249 aaKnown RBP12.79□□□□□ -0.36
TRAPPC8-204ENST00000578252 LACTBP83111 547 aaPredicted RBP12.79□□□□□ -0.36
TRAPPC8-204ENST00000578252 BAATQ14032 418 aaPredicted RBP12.79□□□□□ -0.36
TRAPPC8-204ENST00000578252 PWP2Q15269 919 aaKnown RBP12.79□□□□□ -0.36
TRAPPC8-204ENST00000578252 MCTP1Q6DN14 999 aa12.79□□□□□ -0.36
TRAPPC8-204ENST00000578252 USP17L6PQ6QN14 398 aa12.79□□□□□ -0.36
TRAPPC8-204ENST00000578252 SLC30A10Q6XR72 485 aa12.79□□□□□ -0.36
TRAPPC8-204ENST00000578252 BRAPQ7Z569 592 aa12.79□□□□□ -0.36
TRAPPC8-204ENST00000578252 JMYQ8N9B5 988 aa12.79□□□□□ -0.36
TRAPPC8-204ENST00000578252 SOCS4Q8WXH5 440 aa12.79□□□□□ -0.36
TRAPPC8-204ENST00000578252 ERO1AQ96HE7 468 aa12.79□□□□□ -0.36
TRAPPC8-204ENST00000578252 CHMP5Q9NZZ3 219 aa12.79□□□□□ -0.36
TRAPPC8-204ENST00000578252 ADD3Q9UEY8 706 aaKnown RBP12.79□□□□□ -0.36
TRAPPC8-204ENST00000578252 ARIH1Q9Y4X5 557 aaPredicted RBP12.79□□□□□ -0.36
TRAPPC8-204ENST00000578252 LCTP09848 1927 aa12.78□□□□□ -0.36
TRAPPC8-204ENST00000578252 CCDC194A0A1B0GVG4 234 aa12.78□□□□□ -0.36
TRAPPC8-204ENST00000578252 BTBD18B2RXH4 712 aa12.78□□□□□ -0.36
TRAPPC8-204ENST00000578252 TNPO2O14787 897 aaKnown RBP12.78□□□□□ -0.36
TRAPPC8-204ENST00000578252 FKTNO75072 461 aa12.78□□□□□ -0.36
TRAPPC8-204ENST00000578252 GNRH1P01148 92 aa12.78□□□□□ -0.36
TRAPPC8-204ENST00000578252 GRB14Q14449 540 aa12.78□□□□□ -0.36
TRAPPC8-204ENST00000578252 NONOQ15233 471 aaKnown RBP eCLIP12.78□□□□□ -0.36
TRAPPC8-204ENST00000578252 UBE2SQ16763 222 aa12.78□□□□□ -0.36
TRAPPC8-204ENST00000578252 NOSTRINQ8IVI9 506 aa12.78□□□□□ -0.36
TRAPPC8-204ENST00000578252 DNERQ8NFT8 737 aa12.78□□□□□ -0.36
TRAPPC8-204ENST00000578252 SYTL5Q8TDW5 730 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC8-204ENST00000578252 MPHOSPH6Q99547 160 aaKnown RBP12.78□□□□□ -0.36
TRAPPC8-204ENST00000578252 R3HDMLQ9H3Y0 253 aa12.78□□□□□ -0.36
TRAPPC8-204ENST00000578252 BIN2Q9UBW5 565 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC8-204ENST00000578252 PCDHA6Q9UN73 950 aa12.78□□□□□ -0.36
TRAPPC8-204ENST00000578252 PCDHA8Q9Y5H6 950 aa12.78□□□□□ -0.36
TRAPPC8-204ENST00000578252 MYH15Q9Y2K3 1946 aa12.78□□□□□ -0.36
TRAPPC8-204ENST00000578252 CASP8AP2Q9UKL3 1982 aa12.78□□□□□ -0.36
TRAPPC8-204ENST00000578252 DNAJC25-GNG10A0A024R161 153 aa12.77□□□□□ -0.37
TRAPPC8-204ENST00000578252 BRD1O95696 1058 aa12.77□□□□□ -0.37
TRAPPC8-204ENST00000578252 ADORA2AP29274 412 aa12.77□□□□□ -0.37
TRAPPC8-204ENST00000578252 HOXA13P31271 388 aaPredicted RBP12.77□□□□□ -0.37
TRAPPC8-204ENST00000578252 NR5A1Q13285 461 aa12.77□□□□□ -0.37
TRAPPC8-204ENST00000578252 NBR1Q14596 966 aa12.77□□□□□ -0.37
TRAPPC8-204ENST00000578252 JAKMIP3Q5VZ66 844 aa12.77□□□□□ -0.37
TRAPPC8-204ENST00000578252 XRRA1Q6P2D8 792 aa12.77□□□□□ -0.37
TRAPPC8-204ENST00000578252 FAM133AQ8N9E0 248 aa12.77□□□□□ -0.37
TRAPPC8-204ENST00000578252 NSUN6Q8TEA1 469 aaKnown RBP12.77□□□□□ -0.37
TRAPPC8-204ENST00000578252 TBC1D5Q92609 795 aa12.77□□□□□ -0.37
TRAPPC8-204ENST00000578252 TNFRSF25Q93038 417 aa12.77□□□□□ -0.37
TRAPPC8-204ENST00000578252 NAP1L4Q99733 375 aaKnown RBP12.77□□□□□ -0.37
TRAPPC8-204ENST00000578252 ANO3Q9BYT9 981 aa12.77□□□□□ -0.37
TRAPPC8-204ENST00000578252 NOL7Q9UMY1 257 aaKnown RBP12.77□□□□□ -0.37
TRAPPC8-204ENST00000578252 DIS3Q9Y2L1 958 aaKnown RBP12.77□□□□□ -0.37
TRAPPC8-204ENST00000578252 ATP6V1DQ9Y5K8 247 aa12.77□□□□□ -0.37
TRAPPC8-204ENST00000578252 FRMPD4Q14CM0 1322 aa12.77□□□□□ -0.37
TRAPPC8-204ENST00000578252 F13A1P00488 732 aa12.76□□□□□ -0.37
TRAPPC8-204ENST00000578252 HOXD10P28358 340 aa12.76□□□□□ -0.37
TRAPPC8-204ENST00000578252 SREBF1P36956 1147 aa12.76□□□□□ -0.37
TRAPPC8-204ENST00000578252 RGS2P41220 211 aa12.76□□□□□ -0.37
TRAPPC8-204ENST00000578252 PSMC4P43686 418 aa12.76□□□□□ -0.37
TRAPPC8-204ENST00000578252 TRAPPC10P48553 1259 aa12.76□□□□□ -0.37
TRAPPC8-204ENST00000578252 RESTQ13127 1097 aa12.76□□□□□ -0.37
TRAPPC8-204ENST00000578252 MAP2K5Q13163 448 aa12.76□□□□□ -0.37
TRAPPC8-204ENST00000578252 MORN1Q5T089 497 aa12.76□□□□□ -0.37
TRAPPC8-204ENST00000578252 ARHGEF16Q5VV41 709 aa12.76□□□□□ -0.37
TRAPPC8-204ENST00000578252 DPP9Q86TI2 863 aa12.76□□□□□ -0.37
TRAPPC8-204ENST00000578252 FCHSD1Q86WN1 690 aa12.76□□□□□ -0.37
TRAPPC8-204ENST00000578252 RASGRP4Q8TDF6 673 aa12.76□□□□□ -0.37
TRAPPC8-204ENST00000578252 KCTD12Q96CX2 325 aaKnown RBP12.76□□□□□ -0.37
TRAPPC8-204ENST00000578252 IWS1Q96ST2 819 aa12.76□□□□□ -0.37
TRAPPC8-204ENST00000578252 RMDN3Q96TC7 470 aa12.76□□□□□ -0.37
TRAPPC8-204ENST00000578252 NUDT12Q9BQG2 462 aa12.76□□□□□ -0.37
TRAPPC8-204ENST00000578252 TMEM260Q9NX78 707 aa12.76□□□□□ -0.37
TRAPPC8-204ENST00000578252 RPTORQ8N122 1335 aa12.76□□□□□ -0.37
TRAPPC8-204ENST00000578252 MYH7BA7E2Y1 1941 aa12.76□□□□□ -0.37
TRAPPC8-204ENST00000578252 ZSWIM8A7E2V4 1837 aa12.75□□□□□ -0.37
TRAPPC8-204ENST00000578252 KIF28PB7ZC32 967 aa12.75□□□□□ -0.37
TRAPPC8-204ENST00000578252 BHMG1C9JSJ3 638 aaPredicted RBP12.75□□□□□ -0.37
TRAPPC8-204ENST00000578252 HOXC6P09630 235 aa12.75□□□□□ -0.37
TRAPPC8-204ENST00000578252 PRMT2P55345 433 aa12.75□□□□□ -0.37
TRAPPC8-204ENST00000578252 ORC2Q13416 577 aaPredicted RBP12.75□□□□□ -0.37
TRAPPC8-204ENST00000578252 PROX2Q3B8N5 592 aa12.75□□□□□ -0.37
TRAPPC8-204ENST00000578252 RILPL1Q5EBL4 403 aa12.75□□□□□ -0.37
TRAPPC8-204ENST00000578252 C6orf132Q5T0Z8 1188 aa12.75□□□□□ -0.37
TRAPPC8-204ENST00000578252 PIK3AP1Q6ZUJ8 805 aa12.75□□□□□ -0.37
TRAPPC8-204ENST00000578252 FERMT3Q86UX7 667 aa12.75□□□□□ -0.37
TRAPPC8-204ENST00000578252 MSL3Q8N5Y2 521 aaKnown RBP12.75□□□□□ -0.37
TRAPPC8-204ENST00000578252 TBCKQ8TEA7 893 aa12.75□□□□□ -0.37
TRAPPC8-204ENST00000578252 ZNF296Q8WUU4 475 aaPredicted RBP12.75□□□□□ -0.37
TRAPPC8-204ENST00000578252 TRIM47Q96LD4 638 aa12.75□□□□□ -0.37
TRAPPC8-204ENST00000578252 PXMP2Q9NR77 195 aa12.75□□□□□ -0.37
TRAPPC8-204ENST00000578252 COL20A1Q9P218 1284 aa12.75□□□□□ -0.37
TRAPPC8-204ENST00000578252 LRRC37A2A6NM11 1700 aa12.74□□□□□ -0.37
TRAPPC8-204ENST00000578252 ASB14A6NK59 587 aa12.74□□□□□ -0.37
TRAPPC8-204ENST00000578252 STAM2O75886 525 aa12.74□□□□□ -0.37
TRAPPC8-204ENST00000578252 PGK2P07205 417 aa12.74□□□□□ -0.37
TRAPPC8-204ENST00000578252 CYP3A4P08684 503 aa12.74□□□□□ -0.37
TRAPPC8-204ENST00000578252 GCFC2P16383 781 aaKnown RBP12.74□□□□□ -0.37
TRAPPC8-204ENST00000578252 EIF2AK2P19525 551 aaKnown RBP12.74□□□□□ -0.37
TRAPPC8-204ENST00000578252 CCND2P30279 289 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms